EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000018486 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2861 bases
Position: chr12:1337508-1340368
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000035695	AKAP7_NLS	PF10469.9	2.3e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000030313	-	731	-	ENSCINP00000035695	238 (aa)	-	H2Y1B1

Gene Model

Click here to download ENSCING00000018486's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000018486's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000018486	-	95	32.911	ENSAPOG00000016315	-	61	33.796	Acanthochromis_polyacanthus
ENSCING00000018486	-	91	32.314	ENSACIG00000015596	-	73	32.227	Amphilophus_citrinellus
ENSCING00000018486	-	84	33.333	ENSACLG00000007716	-	50	32.870	Astatotilapia_calliptera
ENSCING00000018486	-	84	32.836	ENSFHEG00000000779	-	50	32.407	Fundulus_heteroclitus
ENSCING00000018486	-	84	31.658	ENSGMOG00000011815	-	92	31.658	Gadus_morhua
ENSCING00000018486	-	84	33.831	ENSLBEG00000001397	-	75	33.831	Labrus_bergylta
ENSCING00000018486	-	84	33.333	ENSMAMG00000014915	-	57	32.870	Mastacembelus_armatus
ENSCING00000018486	-	93	33.333	ENSMMOG00000015178	-	72	34.328	Mola_mola
ENSCING00000018486	-	84	33.333	ENSNBRG00000022718	-	66	31.019	Neolamprologus_brichardi
ENSCING00000018486	-	82	33.166	ENSONIG00000000680	-	86	32.710	Oreochromis_niloticus
ENSCING00000018486	-	83	33.000	ENSORLG00000027151	-	52	32.719	Oryzias_latipes
ENSCING00000018486	-	83	32.500	ENSORLG00020002225	-	52	32.258	Oryzias_latipes_hni
ENSCING00000018486	-	83	32.000	ENSORLG00015020665	-	52	31.797	Oryzias_latipes_hsok
ENSCING00000018486	-	82	32.323	ENSPMGG00000001295	-	76	31.863	Periophthalmus_magnuspinnatus
ENSCING00000018486	-	91	32.468	ENSPFOG00000010538	-	94	32.323	Poecilia_formosa
ENSCING00000018486	-	91	32.900	ENSPREG00000012679	-	50	32.407	Poecilia_reticulata
ENSCING00000018486	-	96	33.617	ENSSLDG00000025505	-	51	33.796	Seriola_lalandi_dorsalis
ENSCING00000018486	-	97	31.513	ENSTRUG00000014580	-	58	31.280	Takifugu_rubripes
ENSCING00000018486	-	98	30.672	ENSTNIG00000010946	-	64	32.338	Tetraodon_nigroviridis