EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000018496 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1312 bases
Position: chrHT001233.1:12618-13929
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000030120	Ribosomal_L29e	PF01779.17	7.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031081	-	304	-	ENSCINP00000030120	58 (aa)	-	H2XKD8

Gene Model

Click here to download ENSCING00000018496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000018496's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000018496	-	79	76.087	ENSG00000162244	RPL29	92	76.471	Homo_sapiens
ENSCING00000018496	-	90	75.000	ENSAPOG00000002586	rpl29	81	75.000	Acanthochromis_polyacanthus
ENSCING00000018496	-	90	76.923	ENSACIG00000018340	rpl29	81	76.923	Amphilophus_citrinellus
ENSCING00000018496	-	90	78.846	ENSAOCG00000016652	rpl29	81	78.846	Amphiprion_ocellaris
ENSCING00000018496	-	90	78.846	ENSAPEG00000005754	rpl29	81	78.846	Amphiprion_percula
ENSCING00000018496	-	79	78.261	ENSACAG00000006888	RPL29	80	78.846	Anolis_carolinensis
ENSCING00000018496	-	79	76.087	ENSANAG00000024147	-	60	75.000	Aotus_nancymaae
ENSCING00000018496	-	90	76.923	ENSACLG00000017820	rpl29	81	76.923	Astatotilapia_calliptera
ENSCING00000018496	-	90	78.846	ENSAMXG00000038794	rpl29	81	78.846	Astyanax_mexicanus
ENSCING00000018496	-	90	63.462	WBGene00004443	rpl-29	84	63.462	Caenorhabditis_elegans
ENSCING00000018496	-	79	76.087	ENSCJAG00000042339	-	60	75.000	Callithrix_jacchus
ENSCING00000018496	-	79	76.087	ENSCCAG00000027980	-	88	57.143	Cebus_capucinus
ENSCING00000018496	-	100	87.931	ENSCSAVG00000005231	-	98	87.931	Ciona_savignyi
ENSCING00000018496	-	79	76.087	ENSCGRG00001016452	-	76	76.923	Cricetulus_griseus_chok1gshd
ENSCING00000018496	-	86	76.000	ENSCSEG00000010267	rpl29	79	75.000	Cynoglossus_semilaevis
ENSCING00000018496	-	86	78.000	ENSCVAG00000023098	rpl29	81	76.923	Cyprinodon_variegatus
ENSCING00000018496	-	90	76.923	ENSDARG00000077717	rpl29	81	76.923	Danio_rerio
ENSCING00000018496	-	86	58.000	FBgn0016726	RpL29	66	58.000	Drosophila_melanogaster
ENSCING00000018496	-	74	67.442	ENSEASG00005005507	-	66	67.442	Equus_asinus_asinus
ENSCING00000018496	-	90	75.000	ENSELUG00000015592	RL29	74	75.000	Esox_lucius
ENSCING00000018496	-	74	58.140	ENSFCAG00000035470	-	58	56.818	Felis_catus
ENSCING00000018496	-	100	60.345	ENSFCAG00000043006	-	72	60.345	Felis_catus
ENSCING00000018496	-	79	76.087	ENSFALG00000008925	RPL29	76	76.923	Ficedula_albicollis
ENSCING00000018496	-	90	76.923	ENSFHEG00000015425	rpl29	81	76.923	Fundulus_heteroclitus
ENSCING00000018496	-	90	71.154	ENSGMOG00000003626	rpl29	68	71.154	Gadus_morhua
ENSCING00000018496	-	79	76.087	ENSGALG00000026978	RPL29	73	76.923	Gallus_gallus
ENSCING00000018496	-	90	78.846	ENSGAFG00000012868	rpl29	81	78.846	Gambusia_affinis
ENSCING00000018496	-	90	73.077	ENSGACG00000007041	rpl29	68	73.077	Gasterosteus_aculeatus
ENSCING00000018496	-	74	65.116	ENSGAGG00000024203	-	80	65.116	Gopherus_agassizii
ENSCING00000018496	-	79	76.087	ENSGGOG00000024691	RPL29	62	72.973	Gorilla_gorilla
ENSCING00000018496	-	90	76.923	ENSHBUG00000010519	rpl29	81	76.923	Haplochromis_burtoni
ENSCING00000018496	-	86	78.000	ENSHCOG00000000478	rpl29	67	76.923	Hippocampus_comes
ENSCING00000018496	-	90	78.846	ENSIPUG00000001196	rpl29	81	78.846	Ictalurus_punctatus
ENSCING00000018496	-	90	76.923	ENSKMAG00000011291	rpl29	81	76.923	Kryptolebias_marmoratus
ENSCING00000018496	-	90	73.077	ENSLBEG00000016213	rpl29	76	73.077	Labrus_bergylta
ENSCING00000018496	-	90	73.077	ENSLACG00000018622	rpl29	81	73.077	Latimeria_chalumnae
ENSCING00000018496	-	90	73.077	ENSLACG00000018031	-	76	73.077	Latimeria_chalumnae
ENSCING00000018496	-	79	73.913	ENSLOCG00000013798	rpl29	80	75.000	Lepisosteus_oculatus
ENSCING00000018496	-	90	78.846	ENSMAMG00000014274	rpl29	55	78.846	Mastacembelus_armatus
ENSCING00000018496	-	90	76.923	ENSMZEG00005013519	rpl29	81	76.923	Maylandia_zebra
ENSCING00000018496	-	79	76.087	ENSMGAG00000001213	RPL29	73	76.923	Meleagris_gallopavo
ENSCING00000018496	-	95	63.636	ENSMICG00000049466	-	83	63.636	Microcebus_murinus
ENSCING00000018496	-	90	75.000	ENSMMOG00000010430	rpl29	81	75.000	Mola_mola
ENSCING00000018496	-	90	76.923	ENSMALG00000009023	rpl29	67	76.923	Monopterus_albus
ENSCING00000018496	-	79	76.087	ENSMUSG00000048758	Rpl29	76	76.923	Mus_musculus
ENSCING00000018496	-	90	76.923	ENSNBRG00000022109	rpl29	81	76.923	Neolamprologus_brichardi
ENSCING00000018496	-	90	76.923	ENSONIG00000014377	rpl29	83	76.923	Oreochromis_niloticus
ENSCING00000018496	-	90	76.923	ENSORLG00000023610	rpl29	55	76.923	Oryzias_latipes
ENSCING00000018496	-	90	76.923	ENSORLG00020018665	rpl29	55	76.923	Oryzias_latipes_hni
ENSCING00000018496	-	90	76.923	ENSORLG00015014455	rpl29	55	76.923	Oryzias_latipes_hsok
ENSCING00000018496	-	90	76.923	ENSOMEG00000019919	rpl29	81	76.923	Oryzias_melastigma
ENSCING00000018496	-	64	72.973	ENSPPAG00000037142	-	63	72.973	Pan_paniscus
ENSCING00000018496	-	100	60.345	ENSPPRG00000011689	-	89	60.345	Panthera_pardus
ENSCING00000018496	-	100	58.621	ENSPTIG00000011913	-	71	58.621	Panthera_tigris_altaica
ENSCING00000018496	-	79	76.087	ENSPTRG00000043237	RPL29	63	72.973	Pan_troglodytes
ENSCING00000018496	-	79	78.261	ENSPKIG00000025048	rpl29	79	78.846	Paramormyrops_kingsleyae
ENSCING00000018496	-	79	76.087	ENSPSIG00000014699	RPL29	83	76.923	Pelodiscus_sinensis
ENSCING00000018496	-	90	76.923	ENSPMGG00000005361	rpl29	76	76.923	Periophthalmus_magnuspinnatus
ENSCING00000018496	-	90	78.846	ENSPFOG00000011385	rpl29	85	78.846	Poecilia_formosa
ENSCING00000018496	-	86	78.000	ENSPLAG00000012042	rpl29	81	76.923	Poecilia_latipinna
ENSCING00000018496	-	86	80.000	ENSPMEG00000018297	rpl29	81	78.846	Poecilia_mexicana
ENSCING00000018496	-	86	80.000	ENSPREG00000007066	rpl29	81	78.846	Poecilia_reticulata
ENSCING00000018496	-	90	76.923	ENSPNYG00000019481	rpl29	81	76.923	Pundamilia_nyererei
ENSCING00000018496	-	90	76.923	ENSPNAG00000007550	rpl29	81	76.923	Pygocentrus_nattereri
ENSCING00000018496	-	90	69.231	ENSRNOG00000025794	AABR07021239.1	69	69.231	Rattus_norvegicus
ENSCING00000018496	-	79	76.087	YFR032C-A	RPL29	78	76.087	Saccharomyces_cerevisiae
ENSCING00000018496	-	88	78.431	ENSSMAG00000013571	rpl29	80	78.431	Scophthalmus_maximus
ENSCING00000018496	-	86	76.000	ENSSDUG00000016140	rpl29	81	75.000	Seriola_dumerili
ENSCING00000018496	-	79	55.319	ENSSDUG00000020458	-	76	55.319	Seriola_dumerili
ENSCING00000018496	-	86	76.000	ENSSLDG00000003932	rpl29	81	75.000	Seriola_lalandi_dorsalis
ENSCING00000018496	-	79	76.087	ENSSPUG00000003760	RPL29	83	76.923	Sphenodon_punctatus
ENSCING00000018496	-	90	71.154	ENSSPAG00000020292	rpl29	81	71.154	Stegastes_partitus
ENSCING00000018496	-	66	68.421	ENSSSCG00000037047	-	88	72.093	Sus_scrofa
ENSCING00000018496	-	83	60.417	ENSSSCG00000031314	-	75	60.417	Sus_scrofa
ENSCING00000018496	-	79	73.913	ENSTGUG00000006027	RPL29	83	75.000	Taeniopygia_guttata
ENSCING00000018496	-	90	73.077	ENSTRUG00000022273	rpl29	80	73.077	Takifugu_rubripes
ENSCING00000018496	-	90	73.077	ENSTNIG00000014816	rpl29	75	74.510	Tetraodon_nigroviridis
ENSCING00000018496	-	90	63.462	ENSTBEG00000000807	-	63	63.462	Tupaia_belangeri
ENSCING00000018496	-	83	72.917	ENSUAMG00000002601	-	84	72.917	Ursus_americanus
ENSCING00000018496	-	79	71.739	ENSVVUG00000012400	-	91	73.077	Vulpes_vulpes
ENSCING00000018496	-	79	76.087	ENSXETG00000010811	rpl29	69	76.923	Xenopus_tropicalis
ENSCING00000018496	-	90	78.846	ENSXCOG00000013543	rpl29	81	78.846	Xiphophorus_couchianus
ENSCING00000018496	-	90	78.846	ENSXMAG00000020948	rpl29	81	78.846	Xiphophorus_maculatus