EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000018498 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2815 bases
Position: chrHT000075.1:261292-264106
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000031423	RNA_pol_Rpb2_1	PF04563.15	2.9e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031268	-	680	-	ENSCINP00000031423	178 (aa)	-	H2XP40

Gene Model

Click here to download ENSCING00000018498's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000018498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000018498	-	84	35.152	ENSDARG00000104434	CABZ01048453.1	68	35.152	Danio_rerio
ENSCING00000018498	-	94	76.786	ENSMGAG00000012873	-	71	76.786	Meleagris_gallopavo
ENSCING00000018498	-	93	78.313	ENSPMAG00000002089	-	66	78.313	Petromyzon_marinus
ENSCING00000018498	-	85	35.329	ENSTRUG00000019743	polr2b	69	35.329	Takifugu_rubripes