EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000018550 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 7878 bases
Position: chr11:4978422-4986299
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032059	tRNA-synt_1g	PF09334.11	1.7e-150	1	1
ENSCINP00000032059	tRNA-synt_1	PF00133.22	3.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000030656	-	2208	-	ENSCINP00000032059	664 (aa)	-	H2XQX5

Gene Model

Click here to download ENSCING00000018550's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000018550's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000018550	-	99	60.972	ENSG00000166986	MARS	88	62.745	Homo_sapiens
ENSCING00000018550	-	99	59.452	ENSAPOG00000020238	mars	74	59.971	Acanthochromis_polyacanthus
ENSCING00000018550	-	99	60.588	ENSAMEG00000004962	MARS	74	60.597	Ailuropoda_melanoleuca
ENSCING00000018550	-	99	61.404	ENSACIG00000016271	mars	81	61.573	Amphilophus_citrinellus
ENSCING00000018550	-	99	59.452	ENSAOCG00000011411	mars	74	59.971	Amphiprion_ocellaris
ENSCING00000018550	-	99	59.797	ENSAPEG00000008610	mars	77	59.043	Amphiprion_percula
ENSCING00000018550	-	99	60.260	ENSATEG00000025019	mars	74	60.380	Anabas_testudineus
ENSCING00000018550	-	96	62.481	ENSAPLG00000014821	MARS	80	61.267	Anas_platyrhynchos
ENSCING00000018550	-	99	61.019	ENSACAG00000006698	MARS	74	61.237	Anolis_carolinensis
ENSCING00000018550	-	99	60.761	ENSANAG00000027589	MARS	74	60.979	Aotus_nancymaae
ENSCING00000018550	-	99	60.201	ENSACLG00000018937	mars	74	60.496	Astatotilapia_calliptera
ENSCING00000018550	-	99	59.941	ENSAMXG00000017335	mars	74	60.218	Astyanax_mexicanus
ENSCING00000018550	-	99	60.831	ENSBTAG00000018405	MARS	72	60.991	Bos_taurus
ENSCING00000018550	-	86	58.783	WBGene00003415	mars-1	85	58.783	Caenorhabditis_elegans
ENSCING00000018550	-	99	61.674	ENSCJAG00000007249	MARS	74	61.699	Callithrix_jacchus
ENSCING00000018550	-	99	60.414	ENSCAFG00000000229	MARS	72	60.555	Canis_familiaris
ENSCING00000018550	-	99	60.414	ENSCAFG00020023661	MARS	72	60.555	Canis_lupus_dingo
ENSCING00000018550	-	99	61.019	ENSCHIG00000027023	MARS	72	61.346	Capra_hircus
ENSCING00000018550	-	99	60.831	ENSTSYG00000005193	MARS	72	60.991	Carlito_syrichta
ENSCING00000018550	-	81	65.619	ENSCAPG00000014448	MARS	73	65.619	Cavia_aperea
ENSCING00000018550	-	99	60.831	ENSCPOG00000012866	MARS	72	60.991	Cavia_porcellus
ENSCING00000018550	-	99	60.972	ENSCCAG00000032206	MARS	85	60.561	Cebus_capucinus
ENSCING00000018550	-	99	60.411	ENSCATG00000038907	MARS	74	60.417	Cercocebus_atys
ENSCING00000018550	-	99	61.516	ENSCLAG00000012164	MARS	74	61.860	Chinchilla_lanigera
ENSCING00000018550	-	99	60.292	ENSCSAG00000004852	MARS	74	60.296	Chlorocebus_sabaeus
ENSCING00000018550	-	96	60.187	ENSCPBG00000017136	MARS	75	59.063	Chrysemys_picta_bellii
ENSCING00000018550	-	85	82.570	ENSCSAVG00000006145	-	98	82.570	Ciona_savignyi
ENSCING00000018550	-	99	60.704	ENSCANG00000034583	MARS	74	60.714	Colobus_angolensis_palliatus
ENSCING00000018550	-	99	61.037	ENSCGRG00001019238	Mars	72	61.051	Cricetulus_griseus_chok1gshd
ENSCING00000018550	-	99	61.037	ENSCGRG00000017321	Mars	72	61.051	Cricetulus_griseus_crigri
ENSCING00000018550	-	98	58.781	ENSCSEG00000010816	mars	74	59.071	Cynoglossus_semilaevis
ENSCING00000018550	-	99	61.103	ENSCVAG00000009314	mars	74	61.414	Cyprinodon_variegatus
ENSCING00000018550	-	99	58.866	ENSDARG00000034396	mars	70	59.545	Danio_rerio
ENSCING00000018550	-	99	60.322	ENSDNOG00000017502	MARS	72	60.305	Dasypus_novemcinctus
ENSCING00000018550	-	99	60.624	ENSDORG00000007127	Mars	72	60.930	Dipodomys_ordii
ENSCING00000018550	-	97	55.607	FBgn0034401	MetRS	62	55.226	Drosophila_melanogaster
ENSCING00000018550	-	80	59.963	ENSETEG00000007106	MARS	95	59.921	Echinops_telfairi
ENSCING00000018550	-	81	57.116	ENSEBUG00000010439	mars	86	57.116	Eptatretus_burgeri
ENSCING00000018550	-	99	61.300	ENSEASG00005007208	MARS	72	61.479	Equus_asinus_asinus
ENSCING00000018550	-	99	61.300	ENSECAG00000015175	MARS	72	61.479	Equus_caballus
ENSCING00000018550	-	85	64.482	ENSEEUG00000015503	MARS	53	64.482	Erinaceus_europaeus
ENSCING00000018550	-	99	61.243	ENSELUG00000010453	mars	73	61.411	Esox_lucius
ENSCING00000018550	-	99	61.037	ENSFCAG00000002083	MARS	72	61.206	Felis_catus
ENSCING00000018550	-	99	61.209	ENSFDAG00000010217	MARS	74	61.385	Fukomys_damarensis
ENSCING00000018550	-	99	59.175	ENSFHEG00000016374	mars	74	60.088	Fundulus_heteroclitus
ENSCING00000018550	-	99	62.295	ENSGMOG00000007987	mars	71	62.617	Gadus_morhua
ENSCING00000018550	-	99	56.912	ENSGALG00000039315	MARS	74	57.781	Gallus_gallus
ENSCING00000018550	-	99	61.538	ENSGAFG00000013461	mars	74	61.712	Gambusia_affinis
ENSCING00000018550	-	99	59.712	ENSGACG00000006474	mars	72	60.060	Gasterosteus_aculeatus
ENSCING00000018550	-	96	62.481	ENSGAGG00000011640	MARS	75	60.704	Gopherus_agassizii
ENSCING00000018550	-	99	60.825	ENSGGOG00000001982	MARS	76	60.534	Gorilla_gorilla
ENSCING00000018550	-	91	60.289	ENSHBUG00000009575	mars	70	60.458	Haplochromis_burtoni
ENSCING00000018550	-	97	51.227	ENSHGLG00000019739	-	68	52.167	Heterocephalus_glaber_female
ENSCING00000018550	-	99	61.062	ENSHGLG00000013493	MARS	72	61.385	Heterocephalus_glaber_female
ENSCING00000018550	-	97	50.460	ENSHGLG00100004906	-	67	51.364	Heterocephalus_glaber_male
ENSCING00000018550	-	99	61.062	ENSHGLG00100006885	MARS	72	61.385	Heterocephalus_glaber_male
ENSCING00000018550	-	99	61.071	ENSHCOG00000001090	mars	74	61.233	Hippocampus_comes
ENSCING00000018550	-	89	61.977	ENSIPUG00000024410	mars	71	61.977	Ictalurus_punctatus
ENSCING00000018550	-	88	61.720	ENSIPUG00000024413	mars	98	61.720	Ictalurus_punctatus
ENSCING00000018550	-	99	60.714	ENSSTOG00000001128	MARS	72	60.709	Ictidomys_tridecemlineatus
ENSCING00000018550	-	99	61.004	ENSJJAG00000018827	Mars	72	61.171	Jaculus_jaculus
ENSCING00000018550	-	99	59.249	ENSKMAG00000012408	mars	71	63.062	Kryptolebias_marmoratus
ENSCING00000018550	-	99	59.856	ENSLBEG00000013609	mars	74	60.146	Labrus_bergylta
ENSCING00000018550	-	99	62.150	ENSLACG00000018854	MARS	74	62.275	Latimeria_chalumnae
ENSCING00000018550	-	99	61.435	ENSLAFG00000013525	MARS	72	61.455	Loxodonta_africana
ENSCING00000018550	-	99	60.677	ENSMFAG00000010123	MARS	74	60.688	Macaca_fascicularis
ENSCING00000018550	-	99	60.530	ENSMMUG00000011277	MARS	88	62.745	Macaca_mulatta
ENSCING00000018550	-	99	59.824	ENSMNEG00000044464	MARS	74	59.821	Macaca_nemestrina
ENSCING00000018550	-	92	67.883	ENSMLEG00000034638	MARS	75	67.883	Mandrillus_leucophaeus
ENSCING00000018550	-	99	61.493	ENSMAMG00000010012	mars	74	61.622	Mastacembelus_armatus
ENSCING00000018550	-	99	60.641	ENSMZEG00005007092	mars	74	61.095	Maylandia_zebra
ENSCING00000018550	-	99	60.837	ENSMAUG00000011482	Mars	73	60.998	Mesocricetus_auratus
ENSCING00000018550	-	99	61.982	ENSMICG00000032056	MARS	72	62.037	Microcebus_murinus
ENSCING00000018550	-	99	60.237	ENSMOCG00000010941	Mars	72	60.372	Microtus_ochrogaster
ENSCING00000018550	-	95	60.546	ENSMMOG00000007461	mars	71	60.769	Mola_mola
ENSCING00000018550	-	99	60.237	ENSMALG00000010005	mars	76	60.530	Monopterus_albus
ENSCING00000018550	-	96	62.442	MGP_CAROLIEiJ_G0015891	Mars	72	60.896	Mus_caroli
ENSCING00000018550	-	99	60.746	ENSMUSG00000040354	Mars	72	60.836	Mus_musculus
ENSCING00000018550	-	99	60.593	MGP_PahariEiJ_G0031194	Mars	72	60.742	Mus_pahari
ENSCING00000018550	-	96	62.287	MGP_SPRETEiJ_G0016717	Mars	72	60.742	Mus_spretus
ENSCING00000018550	-	99	60.414	ENSMPUG00000001831	MARS	72	60.555	Mustela_putorius_furo
ENSCING00000018550	-	99	61.424	ENSMLUG00000001037	MARS	72	61.610	Myotis_lucifugus
ENSCING00000018550	-	99	61.209	ENSNGAG00000018824	Mars	72	61.385	Nannospalax_galili
ENSCING00000018550	-	99	59.169	ENSNBRG00000004105	mars	80	59.593	Neolamprologus_brichardi
ENSCING00000018550	-	99	60.236	ENSNLEG00000017297	MARS	74	60.239	Nomascus_leucogenys
ENSCING00000018550	-	97	61.796	ENSMEUG00000007195	MARS	81	61.538	Notamacropus_eugenii
ENSCING00000018550	-	99	59.496	ENSOPRG00000006518	MARS	72	59.598	Ochotona_princeps
ENSCING00000018550	-	99	61.128	ENSODEG00000001752	MARS	72	61.455	Octodon_degus
ENSCING00000018550	-	99	59.716	ENSONIG00000005090	mars	74	60.288	Oreochromis_niloticus
ENSCING00000018550	-	61	72.414	ENSOANG00000013318	MARS	65	70.163	Ornithorhynchus_anatinus
ENSCING00000018550	-	99	61.152	ENSOCUG00000007373	MARS	72	61.325	Oryctolagus_cuniculus
ENSCING00000018550	-	99	60.203	ENSORLG00000005405	mars	72	60.272	Oryzias_latipes
ENSCING00000018550	-	99	59.942	ENSORLG00020017397	mars	72	60.150	Oryzias_latipes_hni
ENSCING00000018550	-	97	60.448	ENSORLG00015012976	mars	72	60.423	Oryzias_latipes_hsok
ENSCING00000018550	-	99	61.128	ENSOMEG00000018411	mars	78	60.646	Oryzias_melastigma
ENSCING00000018550	-	99	60.469	ENSOGAG00000005226	MARS	74	60.682	Otolemur_garnettii
ENSCING00000018550	-	99	61.019	ENSOARG00000006477	MARS	72	61.346	Ovis_aries
ENSCING00000018550	-	99	60.408	ENSPPAG00000025147	MARS	75	60.414	Pan_paniscus
ENSCING00000018550	-	99	61.037	ENSPPRG00000023243	MARS	72	61.206	Panthera_pardus
ENSCING00000018550	-	99	61.185	ENSPTIG00000006721	MARS	72	61.360	Panthera_tigris_altaica
ENSCING00000018550	-	99	60.825	ENSPTRG00000005135	MARS	74	60.837	Pan_troglodytes
ENSCING00000018550	-	99	60.411	ENSPANG00000009140	MARS	74	60.417	Papio_anubis
ENSCING00000018550	-	99	60.730	ENSPKIG00000002833	mars	74	60.889	Paramormyrops_kingsleyae
ENSCING00000018550	-	94	39.531	ENSPSIG00000013607	MARS	70	39.607	Pelodiscus_sinensis
ENSCING00000018550	-	98	59.507	ENSPMGG00000014847	mars	72	62.885	Periophthalmus_magnuspinnatus
ENSCING00000018550	-	95	62.848	ENSPEMG00000000046	Mars	72	61.350	Peromyscus_maniculatus_bairdii
ENSCING00000018550	-	99	61.276	ENSPCIG00000023765	MARS	74	61.295	Phascolarctos_cinereus
ENSCING00000018550	-	99	60.580	ENSPFOG00000006998	mars	74	61.176	Poecilia_formosa
ENSCING00000018550	-	99	60.580	ENSPLAG00000017870	mars	74	61.176	Poecilia_latipinna
ENSCING00000018550	-	99	61.111	ENSPMEG00000008197	mars	76	61.721	Poecilia_mexicana
ENSCING00000018550	-	99	61.128	ENSPREG00000008123	mars	77	61.295	Poecilia_reticulata
ENSCING00000018550	-	99	60.236	ENSPPYG00000004691	MARS	74	60.239	Pongo_abelii
ENSCING00000018550	-	99	60.538	ENSPCAG00000016037	MARS	75	60.526	Procavia_capensis
ENSCING00000018550	-	99	61.380	ENSPCOG00000017598	MARS	72	61.562	Propithecus_coquereli
ENSCING00000018550	-	99	60.958	ENSPNYG00000013809	mars	76	61.414	Pundamilia_nyererei
ENSCING00000018550	-	99	60.058	ENSPNAG00000017290	mars	74	60.206	Pygocentrus_nattereri
ENSCING00000018550	-	99	60.882	ENSRNOG00000025459	Mars	72	61.043	Rattus_norvegicus
ENSCING00000018550	-	99	60.825	ENSRBIG00000044782	MARS	74	60.837	Rhinopithecus_bieti
ENSCING00000018550	-	99	60.972	ENSRROG00000042331	MARS	75	60.266	Rhinopithecus_roxellana
ENSCING00000018550	-	86	54.974	YGR264C	MES1	76	54.974	Saccharomyces_cerevisiae
ENSCING00000018550	-	99	58.963	ENSSBOG00000022875	MARS	73	58.947	Saimiri_boliviensis_boliviensis
ENSCING00000018550	-	99	61.869	ENSSHAG00000007182	MARS	72	62.074	Sarcophilus_harrisii
ENSCING00000018550	-	99	58.580	ENSSFOG00015011038	mars	78	58.709	Scleropages_formosus
ENSCING00000018550	-	99	59.740	ENSSMAG00000012409	mars	71	62.908	Scophthalmus_maximus
ENSCING00000018550	-	99	59.568	ENSSDUG00000019070	mars	74	60.146	Seriola_dumerili
ENSCING00000018550	-	89	63.894	ENSSLDG00000005561	mars	69	63.894	Seriola_lalandi_dorsalis
ENSCING00000018550	-	88	65.891	ENSSARG00000002477	MARS	64	66.176	Sorex_araneus
ENSCING00000018550	-	74	69.512	ENSSPUG00000007756	MARS	62	69.915	Sphenodon_punctatus
ENSCING00000018550	-	99	60.029	ENSSPAG00000022691	mars	74	60.176	Stegastes_partitus
ENSCING00000018550	-	99	61.152	ENSSSCG00000023318	MARS	68	61.479	Sus_scrofa
ENSCING00000018550	-	99	61.079	ENSTRUG00000014774	mars	72	61.538	Takifugu_rubripes
ENSCING00000018550	-	99	60.028	ENSTNIG00000007060	mars	73	60.296	Tetraodon_nigroviridis
ENSCING00000018550	-	87	54.160	ENSTBEG00000000303	MARS	74	54.011	Tupaia_belangeri
ENSCING00000018550	-	99	60.825	ENSTTRG00000013088	MARS	72	60.983	Tursiops_truncatus
ENSCING00000018550	-	99	60.444	ENSUMAG00000019826	MARS	74	60.448	Ursus_maritimus
ENSCING00000018550	-	99	60.414	ENSVVUG00000017940	MARS	72	60.555	Vulpes_vulpes
ENSCING00000018550	-	90	61.463	ENSXETG00000025174	mars	98	61.589	Xenopus_tropicalis
ENSCING00000018550	-	99	59.682	ENSXCOG00000013878	mars	75	60.207	Xiphophorus_couchianus
ENSCING00000018550	-	99	60.549	ENSXMAG00000017920	mars	74	60.850	Xiphophorus_maculatus