EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000018579 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 6931 bases
Position: chr10:4276446-4283376
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000031642	RRM_1	PF00076.22	9.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031862	-	666	-	ENSCINP00000031642	222 (aa)	-	H2XPQ8

Gene Model

Click here to download ENSCING00000018579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000018579's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000018579	-	99	52.838	ENSG00000153944	MSI2	85	72.222	Homo_sapiens
ENSCING00000018579	-	90	53.659	ENSAPOG00000001658	msi2a	87	53.171	Acanthochromis_polyacanthus
ENSCING00000018579	-	97	49.791	ENSAMEG00000002697	MSI2	63	72.000	Ailuropoda_melanoleuca
ENSCING00000018579	-	90	53.659	ENSAPEG00000007706	msi2a	87	53.171	Amphiprion_percula
ENSCING00000018579	-	97	51.818	ENSATEG00000003301	-	64	69.600	Anabas_testudineus
ENSCING00000018579	-	90	53.659	ENSATEG00000010498	msi2a	87	53.171	Anabas_testudineus
ENSCING00000018579	-	98	52.863	ENSANAG00000037827	MSI2	85	72.222	Aotus_nancymaae
ENSCING00000018579	-	90	53.110	ENSACLG00000007752	msi2a	87	53.659	Astatotilapia_calliptera
ENSCING00000018579	-	97	53.394	ENSAMXG00000010474	msi2b	88	53.431	Astyanax_mexicanus
ENSCING00000018579	-	97	53.604	ENSAMXG00000032796	msi2a	87	52.683	Astyanax_mexicanus
ENSCING00000018579	-	97	53.125	ENSBTAG00000004406	MSI2	90	54.634	Bos_taurus
ENSCING00000018579	-	97	53.125	ENSCJAG00000013998	MSI2	85	72.222	Callithrix_jacchus
ENSCING00000018579	-	97	49.791	ENSCAFG00020025620	MSI2	67	72.222	Canis_lupus_dingo
ENSCING00000018579	-	97	53.125	ENSCHIG00000016580	MSI2	87	54.634	Capra_hircus
ENSCING00000018579	-	97	52.915	ENSCPOG00000034042	MSI2	72	54.634	Cavia_porcellus
ENSCING00000018579	-	98	52.863	ENSCCAG00000033927	MSI2	85	72.222	Cebus_capucinus
ENSCING00000018579	-	99	52.632	ENSCATG00000040879	MSI2	85	72.222	Cercocebus_atys
ENSCING00000018579	-	97	50.000	ENSCLAG00000014325	MSI2	60	72.000	Chinchilla_lanigera
ENSCING00000018579	-	97	53.125	ENSCSAG00000005633	MSI2	87	54.634	Chlorocebus_sabaeus
ENSCING00000018579	-	97	53.846	ENSCPBG00000009942	MSI2	56	72.000	Chrysemys_picta_bellii
ENSCING00000018579	-	98	86.047	ENSCSAVG00000010397	-	69	87.200	Ciona_savignyi
ENSCING00000018579	-	99	52.632	ENSCANG00000036414	MSI2	85	72.222	Colobus_angolensis_palliatus
ENSCING00000018579	-	97	53.333	ENSCGRG00001013330	Msi2	63	72.000	Cricetulus_griseus_chok1gshd
ENSCING00000018579	-	97	50.000	ENSCGRG00000003141	Msi2	64	72.000	Cricetulus_griseus_crigri
ENSCING00000018579	-	97	44.395	ENSCSEG00000003266	-	51	68.041	Cynoglossus_semilaevis
ENSCING00000018579	-	90	53.659	ENSCVAG00000017075	msi2a	89	53.171	Cyprinodon_variegatus
ENSCING00000018579	-	85	56.410	ENSDARG00000032614	msi2b	100	85.106	Danio_rerio
ENSCING00000018579	-	97	53.125	ENSDNOG00000014501	MSI2	93	54.634	Dasypus_novemcinctus
ENSCING00000018579	-	83	43.878	ENSDORG00000005394	Msi2	75	48.000	Dipodomys_ordii
ENSCING00000018579	-	90	53.234	FBgn0260943	Rbp6	75	67.213	Drosophila_melanogaster
ENSCING00000018579	-	79	47.340	ENSEBUG00000006732	msi2a	52	59.504	Eptatretus_burgeri
ENSCING00000018579	-	95	53.211	ENSEASG00005002965	MSI2	58	72.000	Equus_asinus_asinus
ENSCING00000018579	-	97	52.915	ENSECAG00000011435	MSI2	66	72.000	Equus_caballus
ENSCING00000018579	-	97	46.281	ENSELUG00000001361	msi2b	76	62.222	Esox_lucius
ENSCING00000018579	-	97	52.466	ENSELUG00000011747	msi2a	72	70.635	Esox_lucius
ENSCING00000018579	-	97	53.125	ENSFCAG00000041686	MSI2	85	72.222	Felis_catus
ENSCING00000018579	-	97	49.791	ENSFDAG00000016118	MSI2	64	72.000	Fukomys_damarensis
ENSCING00000018579	-	90	52.632	ENSFHEG00000000084	msi2a	82	82.979	Fundulus_heteroclitus
ENSCING00000018579	-	97	49.583	ENSGALG00000005567	MSI2	60	72.000	Gallus_gallus
ENSCING00000018579	-	90	43.458	ENSGAFG00000006974	msi2a	78	82.979	Gambusia_affinis
ENSCING00000018579	-	97	47.773	ENSGAGG00000016542	MSI2	59	72.000	Gopherus_agassizii
ENSCING00000018579	-	99	52.838	ENSGGOG00000013182	MSI2	85	72.222	Gorilla_gorilla
ENSCING00000018579	-	90	53.110	ENSHBUG00000020800	msi2a	61	80.645	Haplochromis_burtoni
ENSCING00000018579	-	83	45.714	ENSHGLG00000012444	MSI2	56	69.474	Heterocephalus_glaber_female
ENSCING00000018579	-	90	47.414	ENSHCOG00000000266	msi2a	87	48.899	Hippocampus_comes
ENSCING00000018579	-	97	53.636	ENSIPUG00000021097	msi2a	87	54.146	Ictalurus_punctatus
ENSCING00000018579	-	99	51.754	ENSIPUG00000003732	msi2b	86	53.333	Ictalurus_punctatus
ENSCING00000018579	-	97	52.915	ENSSTOG00000007884	MSI2	72	54.634	Ictidomys_tridecemlineatus
ENSCING00000018579	-	90	52.153	ENSKMAG00000009494	msi2a	87	53.171	Kryptolebias_marmoratus
ENSCING00000018579	-	90	53.659	ENSLBEG00000007061	msi2a	75	80.645	Labrus_bergylta
ENSCING00000018579	-	60	67.883	ENSLOCG00000004675	msi2b	71	42.529	Lepisosteus_oculatus
ENSCING00000018579	-	99	52.632	ENSMFAG00000003775	MSI2	85	72.222	Macaca_fascicularis
ENSCING00000018579	-	99	52.632	ENSMMUG00000002069	MSI2	85	72.222	Macaca_mulatta
ENSCING00000018579	-	99	52.632	ENSMNEG00000045275	MSI2	85	72.222	Macaca_nemestrina
ENSCING00000018579	-	99	52.632	ENSMLEG00000033888	MSI2	85	72.222	Mandrillus_leucophaeus
ENSCING00000018579	-	90	53.398	ENSMAMG00000010503	msi2a	79	60.870	Mastacembelus_armatus
ENSCING00000018579	-	94	52.558	ENSMAMG00000002488	-	85	82.979	Mastacembelus_armatus
ENSCING00000018579	-	90	53.110	ENSMZEG00005007676	msi2a	87	53.659	Maylandia_zebra
ENSCING00000018579	-	97	50.207	ENSMAUG00000003862	Msi2	60	72.000	Mesocricetus_auratus
ENSCING00000018579	-	97	53.125	ENSMICG00000013598	-	85	72.222	Microcebus_murinus
ENSCING00000018579	-	97	50.000	ENSMOCG00000005820	Msi2	60	72.000	Microtus_ochrogaster
ENSCING00000018579	-	90	51.707	ENSMMOG00000008348	msi2a	76	83.333	Mola_mola
ENSCING00000018579	-	90	52.632	ENSMALG00000000071	msi2a	68	75.758	Monopterus_albus
ENSCING00000018579	-	97	53.125	MGP_CAROLIEiJ_G0016948	Msi2	100	80.645	Mus_caroli
ENSCING00000018579	-	97	53.125	ENSMUSG00000069769	Msi2	100	80.645	Mus_musculus
ENSCING00000018579	-	97	53.125	MGP_PahariEiJ_G0018079	Msi2	100	80.645	Mus_pahari
ENSCING00000018579	-	97	53.125	MGP_SPRETEiJ_G0017795	Msi2	100	80.645	Mus_spretus
ENSCING00000018579	-	97	53.125	ENSMPUG00000015377	MSI2	90	54.634	Mustela_putorius_furo
ENSCING00000018579	-	97	53.125	ENSMLUG00000007865	MSI2	90	54.634	Myotis_lucifugus
ENSCING00000018579	-	97	50.000	ENSNGAG00000017807	Msi2	60	72.000	Nannospalax_galili
ENSCING00000018579	-	90	53.110	ENSNBRG00000014596	msi2a	79	83.333	Neolamprologus_brichardi
ENSCING00000018579	-	99	52.632	ENSNLEG00000008059	MSI2	87	72.222	Nomascus_leucogenys
ENSCING00000018579	-	61	57.554	ENSOPRG00000000872	-	52	60.800	Ochotona_princeps
ENSCING00000018579	-	97	50.000	ENSODEG00000011974	MSI2	60	72.000	Octodon_degus
ENSCING00000018579	-	97	53.125	ENSOCUG00000010440	MSI2	90	54.634	Oryctolagus_cuniculus
ENSCING00000018579	-	90	52.632	ENSORLG00000009671	msi2a	87	53.171	Oryzias_latipes
ENSCING00000018579	-	90	52.632	ENSORLG00020021556	msi2a	87	53.171	Oryzias_latipes_hni
ENSCING00000018579	-	90	52.632	ENSORLG00015004592	msi2a	87	53.171	Oryzias_latipes_hsok
ENSCING00000018579	-	90	52.632	ENSOMEG00000000146	msi2a	89	53.171	Oryzias_melastigma
ENSCING00000018579	-	97	47.085	ENSOGAG00000005621	MSI2	93	48.293	Otolemur_garnettii
ENSCING00000018579	-	97	49.791	ENSPPAG00000037697	MSI2	85	72.222	Pan_paniscus
ENSCING00000018579	-	97	53.125	ENSPPRG00000001848	MSI2	85	72.222	Panthera_pardus
ENSCING00000018579	-	97	49.791	ENSPTIG00000021678	MSI2	76	72.222	Panthera_tigris_altaica
ENSCING00000018579	-	61	61.702	ENSPTIG00000021873	-	51	65.873	Panthera_tigris_altaica
ENSCING00000018579	-	99	52.838	ENSPTRG00000009437	MSI2	85	72.222	Pan_troglodytes
ENSCING00000018579	-	99	52.632	ENSPANG00000022319	MSI2	85	72.222	Papio_anubis
ENSCING00000018579	-	94	52.113	ENSPKIG00000007038	-	82	50.739	Paramormyrops_kingsleyae
ENSCING00000018579	-	61	67.857	ENSPSIG00000008618	MSI2	51	72.000	Pelodiscus_sinensis
ENSCING00000018579	-	90	53.171	ENSPMGG00000005888	msi2a	87	52.683	Periophthalmus_magnuspinnatus
ENSCING00000018579	-	97	49.791	ENSPCIG00000006063	MSI2	58	72.000	Phascolarctos_cinereus
ENSCING00000018579	-	90	53.659	ENSPREG00000000881	msi2a	86	53.398	Poecilia_reticulata
ENSCING00000018579	-	97	49.776	ENSPPYG00000008244	-	85	51.220	Pongo_abelii
ENSCING00000018579	-	90	53.110	ENSPNYG00000018393	msi2a	87	53.659	Pundamilia_nyererei
ENSCING00000018579	-	97	53.153	ENSPNAG00000014957	msi2a	87	53.171	Pygocentrus_nattereri
ENSCING00000018579	-	97	53.153	ENSPNAG00000000844	msi2b	87	53.171	Pygocentrus_nattereri
ENSCING00000018579	-	97	52.915	ENSRNOG00000025338	Msi2	92	54.634	Rattus_norvegicus
ENSCING00000018579	-	98	52.863	ENSSBOG00000026425	MSI2	85	72.222	Saimiri_boliviensis_boliviensis
ENSCING00000018579	-	97	49.791	ENSSHAG00000008672	MSI2	64	72.000	Sarcophilus_harrisii
ENSCING00000018579	-	97	51.598	ENSSFOG00015021687	-	72	69.291	Scleropages_formosus
ENSCING00000018579	-	90	52.632	ENSSMAG00000018484	msi2a	87	53.171	Scophthalmus_maximus
ENSCING00000018579	-	90	53.659	ENSSDUG00000014507	msi2a	69	80.645	Seriola_dumerili
ENSCING00000018579	-	97	46.753	ENSSDUG00000021968	-	86	80.851	Seriola_dumerili
ENSCING00000018579	-	90	53.659	ENSSLDG00000017172	msi2a	87	53.171	Seriola_lalandi_dorsalis
ENSCING00000018579	-	90	52.657	ENSSPAG00000017793	msi2a	86	50.990	Stegastes_partitus
ENSCING00000018579	-	97	53.125	ENSSSCG00000038505	MSI2	87	54.634	Sus_scrofa
ENSCING00000018579	-	90	52.632	ENSTRUG00000021248	msi2a	82	53.883	Takifugu_rubripes
ENSCING00000018579	-	97	51.364	ENSTTRG00000002189	MSI2	52	72.000	Tursiops_truncatus
ENSCING00000018579	-	97	53.125	ENSUAMG00000000700	MSI2	85	72.222	Ursus_americanus
ENSCING00000018579	-	95	52.804	ENSUMAG00000000505	MSI2	69	72.000	Ursus_maritimus
ENSCING00000018579	-	97	52.915	ENSVVUG00000011783	MSI2	60	72.000	Vulpes_vulpes
ENSCING00000018579	-	60	65.693	ENSXCOG00000006113	msi2a	81	46.460	Xiphophorus_couchianus
ENSCING00000018579	-	90	52.632	ENSXMAG00000000608	msi2a	89	53.171	Xiphophorus_maculatus