EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000018801 (Gene tree)
Gene ID: 100169927
Gene Symbol: zf(c2h2)-138
Alias: Ci-ZF(C2H2)-138
Full Name: zinc finger protein ZF(C2H2)-138
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 723 bases
Position: chrHT000074.1:257909-258631
Accession: 100169927
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032234	zf-C2H2	PF00096.26	9.6e-40	1	7
ENSCINP00000032234	zf-C2H2	PF00096.26	9.6e-40	2	7
ENSCINP00000032234	zf-C2H2	PF00096.26	9.6e-40	3	7
ENSCINP00000032234	zf-C2H2	PF00096.26	9.6e-40	4	7
ENSCINP00000032234	zf-C2H2	PF00096.26	9.6e-40	5	7
ENSCINP00000032234	zf-C2H2	PF00096.26	9.6e-40	6	7
ENSCINP00000032234	zf-C2H2	PF00096.26	9.6e-40	7	7
ENSCINP00000032234	zf-met	PF12874.7	4.3e-18	1	5
ENSCINP00000032234	zf-met	PF12874.7	4.3e-18	2	5
ENSCINP00000032234	zf-met	PF12874.7	4.3e-18	3	5
ENSCINP00000032234	zf-met	PF12874.7	4.3e-18	4	5
ENSCINP00000032234	zf-met	PF12874.7	4.3e-18	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000035161	-	723	-	ENSCINP00000032234	240 (aa)	-	Q1RL67

Gene Model

Click here to download ENSCING00000018801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000018801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000018801	zf(c2h2)-138	90	64.977	ENSCING00000003470	-	100	64.977	Ciona_intestinalis
ENSCING00000018801	zf(c2h2)-138	86	49.206	ENSCSAVG00000010156	-	94	49.206	Ciona_savignyi
ENSCING00000018801	zf(c2h2)-138	90	51.256	ENSCGRG00001013602	-	83	51.256	Cricetulus_griseus_chok1gshd
ENSCING00000018801	zf(c2h2)-138	90	54.040	ENSCGRG00001007163	-	82	54.040	Cricetulus_griseus_chok1gshd
ENSCING00000018801	zf(c2h2)-138	98	48.969	ENSCGRG00001002297	-	95	48.969	Cricetulus_griseus_chok1gshd
ENSCING00000018801	zf(c2h2)-138	97	51.546	ENSCGRG00000018332	Zfp53	75	51.546	Cricetulus_griseus_crigri
ENSCING00000018801	zf(c2h2)-138	90	54.494	ENSCGRG00000000778	-	81	54.040	Cricetulus_griseus_crigri
ENSCING00000018801	zf(c2h2)-138	97	47.668	ENSEBUG00000005655	-	77	47.668	Eptatretus_burgeri
ENSCING00000018801	zf(c2h2)-138	92	47.423	ENSEBUG00000016878	-	83	47.423	Eptatretus_burgeri
ENSCING00000018801	zf(c2h2)-138	83	43.500	ENSEBUG00000008792	-	88	43.500	Eptatretus_burgeri
ENSCING00000018801	zf(c2h2)-138	84	45.977	ENSEBUG00000001525	-	84	45.977	Eptatretus_burgeri
ENSCING00000018801	zf(c2h2)-138	95	51.759	ENSEBUG00000012823	-	77	51.759	Eptatretus_burgeri
ENSCING00000018801	zf(c2h2)-138	85	42.045	ENSEBUG00000012454	-	89	42.045	Eptatretus_burgeri
ENSCING00000018801	zf(c2h2)-138	90	50.769	ENSMAUG00000005974	-	89	50.769	Mesocricetus_auratus
ENSCING00000018801	zf(c2h2)-138	96	51.190	ENSMAUG00000004844	-	70	51.190	Mesocricetus_auratus
ENSCING00000018801	zf(c2h2)-138	83	54.774	ENSMAUG00000000939	-	74	54.774	Mesocricetus_auratus
ENSCING00000018801	zf(c2h2)-138	97	53.608	ENSMOCG00000006946	Zfp53	79	53.608	Microtus_ochrogaster
ENSCING00000018801	zf(c2h2)-138	88	54.237	ENSMOCG00000007851	-	69	54.237	Microtus_ochrogaster
ENSCING00000018801	zf(c2h2)-138	93	49.485	MGP_CAROLIEiJ_G0021132	Zfp948	80	49.485	Mus_caroli
ENSCING00000018801	zf(c2h2)-138	90	52.062	ENSMUSG00000062743	Zfp677	84	52.062	Mus_musculus
ENSCING00000018801	zf(c2h2)-138	90	43.147	ENSPSIG00000009270	-	73	43.147	Pelodiscus_sinensis
ENSCING00000018801	zf(c2h2)-138	92	55.155	ENSPEMG00000023883	-	87	55.155	Peromyscus_maniculatus_bairdii
ENSCING00000018801	zf(c2h2)-138	88	53.886	ENSPEMG00000007241	-	75	53.886	Peromyscus_maniculatus_bairdii
ENSCING00000018801	zf(c2h2)-138	95	51.777	ENSRNOG00000052406	LOC102552527	86	51.777	Rattus_norvegicus