EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000018938 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 4077 bases
Position: chrHT000314.1:5114-9190
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000031157	RVT_1	PF00078.27	3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000030273	-	3129	-	ENSCINP00000031157	1042 (aa)	-	H2XNC4

Gene Model

Click here to download ENSCING00000018938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000018938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000018938	-	67	31.881	ENSAPOG00000022647	-	50	31.881	Acanthochromis_polyacanthus
ENSCING00000018938	-	68	30.343	ENSATEG00000019692	-	69	30.343	Anabas_testudineus
ENSCING00000018938	-	79	31.746	ENSATEG00000018698	-	77	31.746	Anabas_testudineus
ENSCING00000018938	-	50	30.030	ENSATEG00000006997	-	60	30.030	Anabas_testudineus
ENSCING00000018938	-	57	31.466	ENSATEG00000016298	-	61	31.466	Anabas_testudineus
ENSCING00000018938	-	59	33.413	ENSACLG00000008010	-	58	33.413	Astatotilapia_calliptera
ENSCING00000018938	-	64	32.972	ENSACLG00000002182	-	52	32.972	Astatotilapia_calliptera
ENSCING00000018938	-	64	31.687	ENSACLG00000005531	-	51	31.729	Astatotilapia_calliptera
ENSCING00000018938	-	74	31.634	ENSACLG00000003799	-	61	31.634	Astatotilapia_calliptera
ENSCING00000018938	-	60	33.124	ENSACLG00000018344	-	55	33.124	Astatotilapia_calliptera
ENSCING00000018938	-	50	32.508	ENSACLG00000021355	-	67	32.508	Astatotilapia_calliptera
ENSCING00000018938	-	64	32.972	ENSACLG00000019658	-	52	32.972	Astatotilapia_calliptera
ENSCING00000018938	-	56	32.626	ENSACLG00000012657	-	53	32.626	Astatotilapia_calliptera
ENSCING00000018938	-	63	33.703	ENSACLG00000003852	-	50	33.703	Astatotilapia_calliptera
ENSCING00000018938	-	64	34.641	ENSACLG00000013947	-	65	34.641	Astatotilapia_calliptera
ENSCING00000018938	-	68	31.223	ENSACLG00000009118	-	54	31.441	Astatotilapia_calliptera
ENSCING00000018938	-	70	30.247	ENSACLG00000001282	-	53	30.247	Astatotilapia_calliptera
ENSCING00000018938	-	66	32.996	ENSACLG00000010542	-	55	32.996	Astatotilapia_calliptera
ENSCING00000018938	-	68	31.004	ENSACLG00000016624	-	55	31.223	Astatotilapia_calliptera
ENSCING00000018938	-	75	41.927	ENSACLG00000019989	-	88	41.927	Astatotilapia_calliptera
ENSCING00000018938	-	71	30.123	ENSACLG00000014688	-	68	30.123	Astatotilapia_calliptera
ENSCING00000018938	-	64	31.938	ENSACLG00000015880	-	53	31.938	Astatotilapia_calliptera
ENSCING00000018938	-	56	32.626	ENSACLG00000000373	-	53	32.626	Astatotilapia_calliptera
ENSCING00000018938	-	74	31.518	ENSACLG00000006945	-	61	31.518	Astatotilapia_calliptera
ENSCING00000018938	-	54	32.869	ENSAMXG00000035923	-	75	32.869	Astyanax_mexicanus
ENSCING00000018938	-	67	34.211	ENSAMXG00000034382	-	63	34.211	Astyanax_mexicanus
ENSCING00000018938	-	64	30.347	ENSAMXG00000038033	-	75	30.347	Astyanax_mexicanus
ENSCING00000018938	-	67	33.472	ENSAMXG00000040885	-	55	33.472	Astyanax_mexicanus
ENSCING00000018938	-	69	30.682	ENSAMXG00000038531	-	58	30.682	Astyanax_mexicanus
ENSCING00000018938	-	71	30.680	ENSAMXG00000029230	-	51	30.680	Astyanax_mexicanus
ENSCING00000018938	-	63	30.361	ENSAMXG00000030908	-	59	30.361	Astyanax_mexicanus
ENSCING00000018938	-	57	32.880	ENSAMXG00000039473	-	55	32.880	Astyanax_mexicanus
ENSCING00000018938	-	68	30.682	ENSAMXG00000039110	-	55	30.682	Astyanax_mexicanus
ENSCING00000018938	-	61	36.795	ENSAMXG00000035335	-	58	31.108	Astyanax_mexicanus
ENSCING00000018938	-	71	30.657	ENSAMXG00000030479	-	59	30.657	Astyanax_mexicanus
ENSCING00000018938	-	62	31.567	ENSAMXG00000041369	-	59	31.567	Astyanax_mexicanus
ENSCING00000018938	-	66	30.670	ENSAMXG00000032559	-	63	30.670	Astyanax_mexicanus
ENSCING00000018938	-	63	31.729	ENSAMXG00000032783	-	51	31.729	Astyanax_mexicanus
ENSCING00000018938	-	63	31.072	ENSAMXG00000030022	-	57	31.072	Astyanax_mexicanus
ENSCING00000018938	-	69	32.999	ENSAMXG00000038338	-	59	32.999	Astyanax_mexicanus
ENSCING00000018938	-	50	33.252	ENSAMXG00000038480	-	78	33.252	Astyanax_mexicanus
ENSCING00000018938	-	63	35.550	ENSAMXG00000043385	-	53	35.550	Astyanax_mexicanus
ENSCING00000018938	-	62	33.508	ENSAMXG00000036113	-	62	33.508	Astyanax_mexicanus
ENSCING00000018938	-	84	85.539	ENSCING00000023194	-	100	85.539	Ciona_intestinalis
ENSCING00000018938	-	79	87.024	ENSCING00000021231	-	100	87.024	Ciona_intestinalis
ENSCING00000018938	-	51	32.062	ENSCSEG00000010442	-	56	32.062	Cynoglossus_semilaevis
ENSCING00000018938	-	62	30.277	ENSCVAG00000019395	-	53	30.277	Cyprinodon_variegatus
ENSCING00000018938	-	55	33.616	ENSCVAG00000020907	-	81	33.616	Cyprinodon_variegatus
ENSCING00000018938	-	63	32.385	ENSGAFG00000016352	-	55	32.385	Gambusia_affinis
ENSCING00000018938	-	50	30.282	ENSGAGG00000022002	-	67	30.282	Gopherus_agassizii
ENSCING00000018938	-	55	32.719	ENSGAGG00000002613	-	82	32.719	Gopherus_agassizii
ENSCING00000018938	-	50	40.678	ENSHBUG00000016445	-	96	40.678	Haplochromis_burtoni
ENSCING00000018938	-	64	34.047	ENSHCOG00000012267	-	60	34.047	Hippocampus_comes
ENSCING00000018938	-	64	32.265	ENSKMAG00000010491	-	52	32.265	Kryptolebias_marmoratus
ENSCING00000018938	-	64	32.265	ENSKMAG00000003018	-	52	32.265	Kryptolebias_marmoratus
ENSCING00000018938	-	50	30.919	ENSKMAG00000013568	-	71	30.919	Kryptolebias_marmoratus
ENSCING00000018938	-	64	32.265	ENSKMAG00000022204	-	52	32.265	Kryptolebias_marmoratus
ENSCING00000018938	-	62	30.556	ENSMZEG00005025542	-	53	30.556	Maylandia_zebra
ENSCING00000018938	-	52	33.051	ENSMZEG00005023862	-	52	33.051	Maylandia_zebra
ENSCING00000018938	-	66	31.557	ENSMALG00000020759	-	54	31.557	Monopterus_albus
ENSCING00000018938	-	52	31.765	ENSORLG00000029184	-	71	31.765	Oryzias_latipes
ENSCING00000018938	-	69	31.373	ENSORLG00000029435	-	54	31.373	Oryzias_latipes
ENSCING00000018938	-	74	32.584	ENSORLG00000027538	-	55	32.584	Oryzias_latipes
ENSCING00000018938	-	68	30.962	ENSORLG00000024164	-	57	30.962	Oryzias_latipes
ENSCING00000018938	-	68	30.513	ENSORLG00000023514	-	58	30.513	Oryzias_latipes
ENSCING00000018938	-	68	31.225	ENSORLG00000022583	-	57	31.225	Oryzias_latipes
ENSCING00000018938	-	66	34.234	ENSORLG00000022361	-	51	34.234	Oryzias_latipes
ENSCING00000018938	-	62	32.462	ENSORLG00000027307	-	56	32.462	Oryzias_latipes
ENSCING00000018938	-	67	34.615	ENSORLG00000029990	-	54	34.615	Oryzias_latipes
ENSCING00000018938	-	66	34.234	ENSORLG00000023909	-	51	34.234	Oryzias_latipes
ENSCING00000018938	-	70	31.321	ENSORLG00000027277	-	57	31.321	Oryzias_latipes
ENSCING00000018938	-	60	33.668	ENSORLG00000024878	-	67	33.668	Oryzias_latipes
ENSCING00000018938	-	64	35.244	ENSORLG00000028051	-	51	35.244	Oryzias_latipes
ENSCING00000018938	-	68	31.496	ENSORLG00000024900	-	50	31.496	Oryzias_latipes
ENSCING00000018938	-	55	33.243	ENSORLG00000025268	-	73	33.243	Oryzias_latipes
ENSCING00000018938	-	68	30.513	ENSORLG00000023024	-	58	30.513	Oryzias_latipes
ENSCING00000018938	-	73	30.769	ENSORLG00000027117	-	59	30.769	Oryzias_latipes
ENSCING00000018938	-	69	31.373	ENSORLG00000025132	-	61	31.373	Oryzias_latipes
ENSCING00000018938	-	62	31.139	ENSORLG00020015203	-	65	31.139	Oryzias_latipes_hni
ENSCING00000018938	-	66	34.459	ENSORLG00020000868	-	57	34.459	Oryzias_latipes_hni
ENSCING00000018938	-	65	33.758	ENSORLG00020017608	-	65	33.758	Oryzias_latipes_hni
ENSCING00000018938	-	71	30.591	ENSORLG00020021286	-	50	30.591	Oryzias_latipes_hni
ENSCING00000018938	-	68	30.396	ENSORLG00020007775	-	58	30.396	Oryzias_latipes_hni
ENSCING00000018938	-	58	30.122	ENSORLG00020021465	-	50	30.122	Oryzias_latipes_hni
ENSCING00000018938	-	63	33.484	ENSORLG00020007648	-	58	33.484	Oryzias_latipes_hni
ENSCING00000018938	-	69	31.373	ENSORLG00020022538	-	54	31.373	Oryzias_latipes_hni
ENSCING00000018938	-	69	31.155	ENSORLG00015017494	-	63	31.155	Oryzias_latipes_hsok
ENSCING00000018938	-	68	30.581	ENSORLG00015022011	-	71	30.581	Oryzias_latipes_hsok
ENSCING00000018938	-	68	30.412	ENSORLG00015001207	-	64	30.412	Oryzias_latipes_hsok
ENSCING00000018938	-	63	32.462	ENSORLG00015018293	-	57	32.462	Oryzias_latipes_hsok
ENSCING00000018938	-	65	34.764	ENSORLG00015010457	-	54	34.764	Oryzias_latipes_hsok
ENSCING00000018938	-	53	31.339	ENSORLG00015000379	-	77	31.339	Oryzias_latipes_hsok
ENSCING00000018938	-	69	31.197	ENSORLG00015003194	-	50	31.197	Oryzias_latipes_hsok
ENSCING00000018938	-	61	31.638	ENSOMEG00000000573	-	60	31.638	Oryzias_melastigma
ENSCING00000018938	-	68	32.974	ENSOMEG00000001995	-	65	32.974	Oryzias_melastigma
ENSCING00000018938	-	67	34.624	ENSOMEG00000012350	-	50	34.624	Oryzias_melastigma
ENSCING00000018938	-	67	30.290	ENSPKIG00000012188	-	54	30.290	Paramormyrops_kingsleyae
ENSCING00000018938	-	73	30.125	ENSPKIG00000011982	-	50	30.125	Paramormyrops_kingsleyae
ENSCING00000018938	-	51	31.071	ENSPKIG00000013778	-	71	31.071	Paramormyrops_kingsleyae
ENSCING00000018938	-	63	33.416	ENSPKIG00000007924	-	72	33.416	Paramormyrops_kingsleyae
ENSCING00000018938	-	67	30.645	ENSPKIG00000006845	-	75	30.645	Paramormyrops_kingsleyae
ENSCING00000018938	-	64	31.330	ENSPKIG00000020363	-	60	31.330	Paramormyrops_kingsleyae
ENSCING00000018938	-	64	32.812	ENSPKIG00000013293	-	61	32.812	Paramormyrops_kingsleyae
ENSCING00000018938	-	52	30.897	ENSPKIG00000006120	-	61	30.897	Paramormyrops_kingsleyae
ENSCING00000018938	-	67	32.700	ENSPMEG00000023031	-	66	32.700	Poecilia_mexicana
ENSCING00000018938	-	59	35.149	ENSPREG00000005134	-	51	35.149	Poecilia_reticulata
ENSCING00000018938	-	64	33.333	ENSPREG00000006052	-	63	33.333	Poecilia_reticulata
ENSCING00000018938	-	65	32.165	ENSPNAG00000017165	-	53	32.165	Pygocentrus_nattereri
ENSCING00000018938	-	63	30.780	ENSPNAG00000021509	-	74	30.780	Pygocentrus_nattereri
ENSCING00000018938	-	75	30.913	ENSSLDG00000003503	-	81	30.913	Seriola_lalandi_dorsalis
ENSCING00000018938	-	58	40.488	ENSTRUG00000021236	-	93	40.488	Takifugu_rubripes
ENSCING00000018938	-	73	40.465	ENSTNIG00000006817	-	85	40.465	Tetraodon_nigroviridis
ENSCING00000018938	-	56	32.479	ENSXMAG00000024180	-	61	32.479	Xiphophorus_maculatus
ENSCING00000018938	-	73	30.059	ENSXMAG00000028155	-	50	30.059	Xiphophorus_maculatus
ENSCING00000018938	-	65	33.846	ENSXMAG00000029360	-	71	33.846	Xiphophorus_maculatus
ENSCING00000018938	-	70	32.104	ENSXMAG00000022159	-	62	32.104	Xiphophorus_maculatus
ENSCING00000018938	-	73	30.328	ENSXMAG00000021686	-	63	30.328	Xiphophorus_maculatus
ENSCING00000018938	-	62	33.772	ENSXMAG00000021440	-	54	33.772	Xiphophorus_maculatus
ENSCING00000018938	-	72	31.034	ENSXMAG00000023370	-	72	31.034	Xiphophorus_maculatus
ENSCING00000018938	-	73	30.059	ENSXMAG00000029008	-	50	30.059	Xiphophorus_maculatus
ENSCING00000018938	-	77	31.399	ENSXMAG00000023331	-	56	31.399	Xiphophorus_maculatus
ENSCING00000018938	-	70	33.333	ENSXMAG00000023990	-	51	33.333	Xiphophorus_maculatus
ENSCING00000018938	-	71	30.353	ENSXMAG00000021254	-	55	30.353	Xiphophorus_maculatus
ENSCING00000018938	-	77	31.477	ENSXMAG00000022795	-	57	31.477	Xiphophorus_maculatus
ENSCING00000018938	-	73	30.445	ENSXMAG00000024126	-	63	30.445	Xiphophorus_maculatus