EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000019260 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 4845 bases
Position: chr7:5734115-5738959
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007911	RimK	PF08443.11	3.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007911	-	2199	-	ENSCINP00000007911	723 (aa)	-	F6YR02

Gene Model

Click here to download ENSCING00000019260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000019260's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000019260	-	90	58.912	ENSG00000078070	MCCC1	96	71.223	Homo_sapiens
ENSCING00000019260	-	92	57.038	ENSAMEG00000015967	MCCC1	92	57.038	Ailuropoda_melanoleuca
ENSCING00000019260	-	75	55.235	ENSACIG00000023146	mccc1	93	70.433	Amphilophus_citrinellus
ENSCING00000019260	-	94	57.453	ENSAPLG00000008989	MCCC1	95	57.453	Anas_platyrhynchos
ENSCING00000019260	-	98	54.533	ENSANAG00000028235	MCCC1	96	69.544	Aotus_nancymaae
ENSCING00000019260	-	91	58.657	ENSACLG00000026110	mccc1	98	57.765	Astatotilapia_calliptera
ENSCING00000019260	-	90	60.270	ENSAMXG00000001531	mccc1	95	58.841	Astyanax_mexicanus
ENSCING00000019260	-	98	55.509	ENSBTAG00000006548	MCCC1	96	55.509	Bos_taurus
ENSCING00000019260	-	92	56.406	ENSCJAG00000005103	MCCC1	97	70.071	Callithrix_jacchus
ENSCING00000019260	-	98	55.230	ENSCAFG00000011749	MCCC1	96	55.230	Canis_familiaris
ENSCING00000019260	-	98	55.230	ENSCAFG00020001000	MCCC1	96	55.230	Canis_lupus_dingo
ENSCING00000019260	-	98	56.206	ENSCHIG00000025794	MCCC1	95	57.267	Capra_hircus
ENSCING00000019260	-	92	57.585	ENSTSYG00000012606	MCCC1	95	71.014	Carlito_syrichta
ENSCING00000019260	-	92	57.794	ENSCAPG00000012269	MCCC1	97	57.794	Cavia_aperea
ENSCING00000019260	-	92	58.174	ENSCPOG00000010866	MCCC1	92	58.174	Cavia_porcellus
ENSCING00000019260	-	90	58.459	ENSCATG00000037699	MCCC1	96	70.504	Cercocebus_atys
ENSCING00000019260	-	82	57.641	ENSCLAG00000014174	MCCC1	98	57.450	Chinchilla_lanigera
ENSCING00000019260	-	90	58.610	ENSCSAG00000013226	MCCC1	90	58.610	Chlorocebus_sabaeus
ENSCING00000019260	-	92	58.419	ENSCPBG00000000534	MCCC1	93	58.419	Chrysemys_picta_bellii
ENSCING00000019260	-	93	98.220	ENSCING00000020099	-	99	98.220	Ciona_intestinalis
ENSCING00000019260	-	95	73.039	ENSCSAVG00000007062	-	98	73.039	Ciona_savignyi
ENSCING00000019260	-	82	57.973	ENSCANG00000037917	MCCC1	98	70.856	Colobus_angolensis_palliatus
ENSCING00000019260	-	90	59.517	ENSCGRG00001012469	Mccc1	91	59.517	Cricetulus_griseus_chok1gshd
ENSCING00000019260	-	90	59.517	ENSCGRG00000002616	Mccc1	91	59.517	Cricetulus_griseus_crigri
ENSCING00000019260	-	92	59.031	ENSCSEG00000019501	mccc1	93	58.576	Cynoglossus_semilaevis
ENSCING00000019260	-	92	57.647	ENSDARG00000102538	mccc1	94	57.647	Danio_rerio
ENSCING00000019260	-	92	56.158	ENSDNOG00000012070	MCCC1	92	56.158	Dasypus_novemcinctus
ENSCING00000019260	-	94	55.988	ENSDORG00000000473	Mccc1	98	55.988	Dipodomys_ordii
ENSCING00000019260	-	90	56.949	ENSETEG00000008384	MCCC1	90	56.949	Echinops_telfairi
ENSCING00000019260	-	53	70.725	ENSEBUG00000016250	-	91	70.725	Eptatretus_burgeri
ENSCING00000019260	-	98	55.633	ENSEASG00005015339	MCCC1	97	72.679	Equus_asinus_asinus
ENSCING00000019260	-	98	56.050	ENSECAG00000008214	MCCC1	96	56.050	Equus_caballus
ENSCING00000019260	-	86	50.946	ENSEEUG00000011233	MCCC1	91	50.389	Erinaceus_europaeus
ENSCING00000019260	-	91	59.043	ENSELUG00000010299	mccc1	98	58.297	Esox_lucius
ENSCING00000019260	-	84	55.825	ENSFCAG00000000940	MCCC1	95	70.773	Felis_catus
ENSCING00000019260	-	92	58.443	ENSFALG00000008252	MCCC1	93	58.443	Ficedula_albicollis
ENSCING00000019260	-	92	56.587	ENSFDAG00000009183	MCCC1	92	56.418	Fukomys_damarensis
ENSCING00000019260	-	91	57.778	ENSGMOG00000008521	mccc1	95	57.778	Gadus_morhua
ENSCING00000019260	-	95	56.454	ENSGALG00000008785	MCCC1	91	56.454	Gallus_gallus
ENSCING00000019260	-	92	58.763	ENSGAFG00000010643	mccc1	94	58.737	Gambusia_affinis
ENSCING00000019260	-	90	57.270	ENSGAGG00000000770	MCCC1	99	57.270	Gopherus_agassizii
ENSCING00000019260	-	92	57.732	ENSGGOG00000002784	MCCC1	96	71.703	Gorilla_gorilla
ENSCING00000019260	-	90	59.276	ENSHBUG00000000956	mccc1	94	58.358	Haplochromis_burtoni
ENSCING00000019260	-	92	57.879	ENSHGLG00000014650	MCCC1	92	57.879	Heterocephalus_glaber_female
ENSCING00000019260	-	98	55.509	ENSHGLG00100015295	MCCC1	97	55.509	Heterocephalus_glaber_male
ENSCING00000019260	-	91	58.271	ENSHCOG00000010503	mccc1	98	57.413	Hippocampus_comes
ENSCING00000019260	-	92	58.850	ENSIPUG00000024615	mccc1	95	58.224	Ictalurus_punctatus
ENSCING00000019260	-	93	56.851	ENSSTOG00000010361	MCCC1	93	56.851	Ictidomys_tridecemlineatus
ENSCING00000019260	-	98	52.999	ENSJJAG00000003543	Mccc1	95	53.693	Jaculus_jaculus
ENSCING00000019260	-	90	60.274	ENSLBEG00000001741	mccc1	91	58.971	Labrus_bergylta
ENSCING00000019260	-	97	56.704	ENSLACG00000018119	MCCC1	98	56.704	Latimeria_chalumnae
ENSCING00000019260	-	92	55.459	ENSLOCG00000000778	mccc1	93	55.459	Lepisosteus_oculatus
ENSCING00000019260	-	92	56.701	ENSLAFG00000018018	MCCC1	93	56.701	Loxodonta_africana
ENSCING00000019260	-	90	58.459	ENSMFAG00000000043	MCCC1	96	70.983	Macaca_fascicularis
ENSCING00000019260	-	84	56.796	ENSMMUG00000010553	MCCC1	97	71.429	Macaca_mulatta
ENSCING00000019260	-	91	55.075	ENSMNEG00000017163	MCCC1	97	67.062	Macaca_nemestrina
ENSCING00000019260	-	90	56.949	ENSMLEG00000039351	MCCC1	96	70.743	Mandrillus_leucophaeus
ENSCING00000019260	-	90	59.276	ENSMZEG00005015532	mccc1	94	58.358	Maylandia_zebra
ENSCING00000019260	-	93	57.933	ENSMGAG00000009494	MCCC1	96	58.126	Meleagris_gallopavo
ENSCING00000019260	-	97	54.965	ENSMICG00000048884	MCCC1	96	70.983	Microcebus_murinus
ENSCING00000019260	-	92	58.174	ENSMOCG00000003671	Mccc1	93	58.174	Microtus_ochrogaster
ENSCING00000019260	-	93	57.709	ENSMODG00000021288	MCCC1	92	57.709	Monodelphis_domestica
ENSCING00000019260	-	92	58.027	MGP_CAROLIEiJ_G0024932	Mccc1	93	58.027	Mus_caroli
ENSCING00000019260	-	92	58.174	ENSMUSG00000027709	Mccc1	93	58.174	Mus_musculus
ENSCING00000019260	-	92	58.174	MGP_SPRETEiJ_G0025866	Mccc1	93	58.174	Mus_spretus
ENSCING00000019260	-	93	56.560	ENSMPUG00000002371	MCCC1	85	56.560	Mustela_putorius_furo
ENSCING00000019260	-	90	59.366	ENSMLUG00000012257	MCCC1	90	59.366	Myotis_lucifugus
ENSCING00000019260	-	93	57.726	ENSNGAG00000001216	Mccc1	95	57.726	Nannospalax_galili
ENSCING00000019260	-	90	56.949	ENSNLEG00000005989	MCCC1	96	71.223	Nomascus_leucogenys
ENSCING00000019260	-	92	55.735	ENSOPRG00000007258	MCCC1	92	55.735	Ochotona_princeps
ENSCING00000019260	-	98	55.540	ENSODEG00000012286	MCCC1	96	57.310	Octodon_degus
ENSCING00000019260	-	90	59.578	ENSONIG00000008395	mccc1	94	58.651	Oreochromis_niloticus
ENSCING00000019260	-	91	56.781	ENSOANG00000011253	MCCC1	99	56.781	Ornithorhynchus_anatinus
ENSCING00000019260	-	92	54.639	ENSOCUG00000012393	MCCC1	92	54.639	Oryctolagus_cuniculus
ENSCING00000019260	-	92	58.910	ENSORLG00000011678	mccc1	96	58.430	Oryzias_latipes
ENSCING00000019260	-	92	59.057	ENSORLG00020005680	mccc1	96	58.576	Oryzias_latipes_hni
ENSCING00000019260	-	92	59.205	ENSORLG00015003526	mccc1	96	58.721	Oryzias_latipes_hsok
ENSCING00000019260	-	92	59.057	ENSOMEG00000011470	mccc1	93	59.031	Oryzias_melastigma
ENSCING00000019260	-	89	55.539	ENSOGAG00000000659	MCCC1	99	55.539	Otolemur_garnettii
ENSCING00000019260	-	92	57.437	ENSOARG00000020660	MCCC1	96	57.437	Ovis_aries
ENSCING00000019260	-	90	59.063	ENSPPAG00000036167	MCCC1	96	71.463	Pan_paniscus
ENSCING00000019260	-	84	55.825	ENSPPRG00000000127	MCCC1	95	70.773	Panthera_pardus
ENSCING00000019260	-	92	56.554	ENSPTIG00000018514	MCCC1	95	70.290	Panthera_tigris_altaica
ENSCING00000019260	-	90	59.063	ENSPTRG00000015662	MCCC1	96	71.463	Pan_troglodytes
ENSCING00000019260	-	90	58.459	ENSPANG00000006870	MCCC1	96	70.743	Papio_anubis
ENSCING00000019260	-	93	57.842	ENSPSIG00000017510	MCCC1	99	57.567	Pelodiscus_sinensis
ENSCING00000019260	-	91	54.491	ENSPMGG00000000155	mccc1	96	54.062	Periophthalmus_magnuspinnatus
ENSCING00000019260	-	97	56.399	ENSPEMG00000014164	Mccc1	97	56.399	Peromyscus_maniculatus_bairdii
ENSCING00000019260	-	98	54.834	ENSPCIG00000013027	MCCC1	83	54.834	Phascolarctos_cinereus
ENSCING00000019260	-	92	59.057	ENSPFOG00000019171	mccc1	94	58.884	Poecilia_formosa
ENSCING00000019260	-	92	59.205	ENSPLAG00000022735	mccc1	94	58.721	Poecilia_latipinna
ENSCING00000019260	-	92	58.910	ENSPMEG00000000664	mccc1	93	58.884	Poecilia_mexicana
ENSCING00000019260	-	95	56.857	ENSPPYG00000014331	MCCC1	94	56.857	Pongo_abelii
ENSCING00000019260	-	98	52.301	ENSPCAG00000003195	MCCC1	96	52.301	Procavia_capensis
ENSCING00000019260	-	97	55.105	ENSPCOG00000020095	MCCC1	96	70.743	Propithecus_coquereli
ENSCING00000019260	-	90	56.732	ENSPVAG00000013436	MCCC1	91	56.732	Pteropus_vampyrus
ENSCING00000019260	-	93	55.977	ENSPNAG00000025069	mccc1	95	55.959	Pygocentrus_nattereri
ENSCING00000019260	-	92	57.879	ENSRNOG00000013293	Mccc1	93	57.879	Rattus_norvegicus
ENSCING00000019260	-	90	58.824	ENSRBIG00000038726	MCCC1	96	70.983	Rhinopithecus_bieti
ENSCING00000019260	-	90	58.673	ENSRROG00000041247	MCCC1	96	70.743	Rhinopithecus_roxellana
ENSCING00000019260	-	90	56.109	ENSSBOG00000026219	MCCC1	98	69.834	Saimiri_boliviensis_boliviensis
ENSCING00000019260	-	93	56.477	ENSSHAG00000016104	MCCC1	97	56.477	Sarcophilus_harrisii
ENSCING00000019260	-	91	60.090	ENSSFOG00015007784	mccc1	95	59.184	Scleropages_formosus
ENSCING00000019260	-	92	58.763	ENSSMAG00000019667	mccc1	93	58.737	Scophthalmus_maximus
ENSCING00000019260	-	90	58.296	ENSSPUG00000014366	MCCC1	99	58.296	Sphenodon_punctatus
ENSCING00000019260	-	90	59.578	ENSSPAG00000011206	mccc1	99	56.410	Stegastes_partitus
ENSCING00000019260	-	90	55.505	ENSSSCG00000025942	MCCC1	95	56.696	Sus_scrofa
ENSCING00000019260	-	92	58.297	ENSTGUG00000010506	MCCC1	99	58.297	Taeniopygia_guttata
ENSCING00000019260	-	92	56.681	ENSTBEG00000007988	MCCC1	98	56.681	Tupaia_belangeri
ENSCING00000019260	-	92	57.143	ENSTTRG00000016518	MCCC1	92	57.143	Tursiops_truncatus
ENSCING00000019260	-	59	69.697	ENSUAMG00000008378	MCCC1	98	70.673	Ursus_americanus
ENSCING00000019260	-	92	56.996	ENSUMAG00000006927	MCCC1	92	56.996	Ursus_maritimus
ENSCING00000019260	-	92	56.554	ENSVVUG00000006835	MCCC1	96	54.533	Vulpes_vulpes
ENSCING00000019260	-	95	57.143	ENSXETG00000016826	mccc1	96	57.143	Xenopus_tropicalis