EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000019371 (Gene tree)
Gene ID: 100175674
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3886 bases
Position: chr5:1735977-1739862
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000034276	tRNA_Me_trans	PF03054.16	1e-116	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000034637	-	1205	-	ENSCINP00000034276	393 (aa)	-	H2XX92

Gene Model

Click here to download ENSCING00000019371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000019371's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000019371	-	96	48.469	ENSG00000100416	TRMU	97	58.140	Homo_sapiens
ENSCING00000019371	-	96	47.462	ENSAPOG00000014458	trmu	94	47.462	Acanthochromis_polyacanthus
ENSCING00000019371	-	94	48.698	ENSAMEG00000003319	TRMU	92	48.698	Ailuropoda_melanoleuca
ENSCING00000019371	-	97	48.232	ENSACIG00000002101	trmu	95	48.232	Amphilophus_citrinellus
ENSCING00000019371	-	96	47.462	ENSAOCG00000013155	trmu	94	47.462	Amphiprion_ocellaris
ENSCING00000019371	-	96	47.208	ENSAPEG00000013350	trmu	94	47.208	Amphiprion_percula
ENSCING00000019371	-	98	47.750	ENSATEG00000007814	trmu	97	47.750	Anabas_testudineus
ENSCING00000019371	-	90	44.414	ENSAPLG00000016380	TRMU	94	44.414	Anas_platyrhynchos
ENSCING00000019371	-	95	48.586	ENSACAG00000007720	TRMU	93	48.586	Anolis_carolinensis
ENSCING00000019371	-	97	48.101	ENSANAG00000038053	TRMU	93	48.101	Aotus_nancymaae
ENSCING00000019371	-	97	47.103	ENSACLG00000005395	trmu	97	46.866	Astatotilapia_calliptera
ENSCING00000019371	-	97	47.250	ENSAMXG00000005282	trmu	97	47.250	Astyanax_mexicanus
ENSCING00000019371	-	95	49.357	ENSBTAG00000005595	TRMU	93	49.357	Bos_taurus
ENSCING00000019371	-	95	39.948	WBGene00007114	mttu-1	100	39.948	Caenorhabditis_elegans
ENSCING00000019371	-	95	48.329	ENSCJAG00000000198	TRMU	90	51.026	Callithrix_jacchus
ENSCING00000019371	-	94	49.219	ENSCAFG00000000779	TRMU	91	48.843	Canis_familiaris
ENSCING00000019371	-	94	49.219	ENSCAFG00020009184	TRMU	91	48.843	Canis_lupus_dingo
ENSCING00000019371	-	95	49.614	ENSCHIG00000017074	TRMU	93	49.614	Capra_hircus
ENSCING00000019371	-	96	48.731	ENSTSYG00000003853	TRMU	93	48.731	Carlito_syrichta
ENSCING00000019371	-	96	43.552	ENSCAPG00000013034	TRMU	96	43.552	Cavia_aperea
ENSCING00000019371	-	95	48.969	ENSCPOG00000020780	TRMU	92	48.969	Cavia_porcellus
ENSCING00000019371	-	95	48.205	ENSCCAG00000021641	TRMU	92	48.205	Cebus_capucinus
ENSCING00000019371	-	95	48.329	ENSCATG00000032800	TRMU	92	48.329	Cercocebus_atys
ENSCING00000019371	-	95	48.454	ENSCLAG00000017269	TRMU	92	48.454	Chinchilla_lanigera
ENSCING00000019371	-	95	48.329	ENSCSAG00000005279	TRMU	92	48.329	Chlorocebus_sabaeus
ENSCING00000019371	-	92	46.524	ENSCPBG00000011621	TRMU	94	46.524	Chrysemys_picta_bellii
ENSCING00000019371	-	95	48.072	ENSCANG00000041645	TRMU	90	50.147	Colobus_angolensis_palliatus
ENSCING00000019371	-	96	46.939	ENSCGRG00001001739	Trmu	93	46.939	Cricetulus_griseus_chok1gshd
ENSCING00000019371	-	96	42.857	ENSCGRG00000002781	Trmu	93	42.857	Cricetulus_griseus_crigri
ENSCING00000019371	-	96	45.293	ENSCSEG00000012382	trmu	94	45.293	Cynoglossus_semilaevis
ENSCING00000019371	-	98	46.482	ENSCVAG00000001366	trmu	96	46.482	Cyprinodon_variegatus
ENSCING00000019371	-	95	45.078	ENSDARG00000043734	trmu	93	45.078	Danio_rerio
ENSCING00000019371	-	55	45.205	ENSDNOG00000047245	-	79	44.737	Dasypus_novemcinctus
ENSCING00000019371	-	95	48.329	ENSDORG00000007455	Trmu	94	48.329	Dipodomys_ordii
ENSCING00000019371	-	91	43.056	FBgn0040337	CG3021	99	42.386	Drosophila_melanogaster
ENSCING00000019371	-	95	44.615	ENSEBUG00000007454	trmu	99	44.737	Eptatretus_burgeri
ENSCING00000019371	-	95	49.227	ENSEASG00005021725	TRMU	92	49.227	Equus_asinus_asinus
ENSCING00000019371	-	95	49.227	ENSECAG00000000467	TRMU	92	49.227	Equus_caballus
ENSCING00000019371	-	95	46.015	ENSELUG00000009464	trmu	98	45.856	Esox_lucius
ENSCING00000019371	-	94	48.958	ENSFCAG00000006533	TRMU	91	48.958	Felis_catus
ENSCING00000019371	-	90	44.828	ENSFALG00000010035	TRMU	95	44.828	Ficedula_albicollis
ENSCING00000019371	-	89	46.175	ENSFDAG00000017472	TRMU	93	46.175	Fukomys_damarensis
ENSCING00000019371	-	98	47.044	ENSFHEG00000003162	trmu	98	47.044	Fundulus_heteroclitus
ENSCING00000019371	-	97	41.895	ENSGMOG00000001323	trmu	98	41.895	Gadus_morhua
ENSCING00000019371	-	97	45.658	ENSGALG00000031922	TRMU	94	45.658	Gallus_gallus
ENSCING00000019371	-	96	47.716	ENSGAFG00000013331	trmu	77	67.105	Gambusia_affinis
ENSCING00000019371	-	96	46.750	ENSGACG00000019024	trmu	94	46.750	Gasterosteus_aculeatus
ENSCING00000019371	-	95	48.843	ENSGGOG00000000203	TRMU	77	64.474	Gorilla_gorilla
ENSCING00000019371	-	97	47.103	ENSHBUG00000023421	trmu	97	46.866	Haplochromis_burtoni
ENSCING00000019371	-	95	47.558	ENSHGLG00000009278	TRMU	92	47.558	Heterocephalus_glaber_female
ENSCING00000019371	-	95	47.558	ENSHGLG00100018863	TRMU	92	47.558	Heterocephalus_glaber_male
ENSCING00000019371	-	94	48.825	ENSHCOG00000013459	trmu	92	48.825	Hippocampus_comes
ENSCING00000019371	-	97	46.465	ENSIPUG00000009785	trmu	97	46.465	Ictalurus_punctatus
ENSCING00000019371	-	95	48.586	ENSSTOG00000010993	TRMU	92	48.586	Ictidomys_tridecemlineatus
ENSCING00000019371	-	99	46.667	ENSJJAG00000000667	Trmu	97	46.667	Jaculus_jaculus
ENSCING00000019371	-	95	47.423	ENSKMAG00000008516	trmu	93	47.423	Kryptolebias_marmoratus
ENSCING00000019371	-	97	46.717	ENSLBEG00000018831	trmu	95	46.717	Labrus_bergylta
ENSCING00000019371	-	97	46.851	ENSLACG00000013713	TRMU	95	46.851	Latimeria_chalumnae
ENSCING00000019371	-	97	47.118	ENSLOCG00000016066	trmu	95	47.118	Lepisosteus_oculatus
ENSCING00000019371	-	95	42.347	ENSLAFG00000005129	TRMU	93	42.347	Loxodonta_africana
ENSCING00000019371	-	95	48.329	ENSMFAG00000039767	TRMU	92	48.329	Macaca_fascicularis
ENSCING00000019371	-	95	48.329	ENSMMUG00000000807	TRMU	92	48.329	Macaca_mulatta
ENSCING00000019371	-	95	48.329	ENSMNEG00000028164	TRMU	92	48.329	Macaca_nemestrina
ENSCING00000019371	-	95	48.329	ENSMLEG00000033884	TRMU	92	48.329	Mandrillus_leucophaeus
ENSCING00000019371	-	99	46.535	ENSMAMG00000004717	trmu	96	46.535	Mastacembelus_armatus
ENSCING00000019371	-	97	47.103	ENSMZEG00005015797	trmu	95	47.103	Maylandia_zebra
ENSCING00000019371	-	77	41.049	ENSMGAG00000007550	TRMU	94	41.049	Meleagris_gallopavo
ENSCING00000019371	-	96	47.074	ENSMAUG00000022282	Trmu	94	47.074	Mesocricetus_auratus
ENSCING00000019371	-	95	48.196	ENSMICG00000029046	TRMU	94	48.196	Microcebus_murinus
ENSCING00000019371	-	95	47.680	ENSMOCG00000014641	Trmu	93	47.680	Microtus_ochrogaster
ENSCING00000019371	-	97	47.208	ENSMMOG00000007229	trmu	95	47.208	Mola_mola
ENSCING00000019371	-	98	46.750	ENSMODG00000007433	TRMU	93	46.750	Monodelphis_domestica
ENSCING00000019371	-	97	46.970	ENSMALG00000007721	trmu	94	46.970	Monopterus_albus
ENSCING00000019371	-	96	46.056	MGP_CAROLIEiJ_G0020134	Trmu	98	47.525	Mus_caroli
ENSCING00000019371	-	96	46.056	ENSMUSG00000022386	Trmu	80	60.759	Mus_musculus
ENSCING00000019371	-	96	46.173	MGP_PahariEiJ_G0020139	Trmu	80	60.759	Mus_pahari
ENSCING00000019371	-	96	46.056	MGP_SPRETEiJ_G0021031	Trmu	98	47.525	Mus_spretus
ENSCING00000019371	-	94	48.958	ENSMPUG00000002523	TRMU	91	48.958	Mustela_putorius_furo
ENSCING00000019371	-	98	47.132	ENSNGAG00000005132	Trmu	96	47.132	Nannospalax_galili
ENSCING00000019371	-	97	46.851	ENSNBRG00000022690	trmu	97	46.851	Neolamprologus_brichardi
ENSCING00000019371	-	95	48.586	ENSNLEG00000015773	TRMU	92	48.586	Nomascus_leucogenys
ENSCING00000019371	-	80	42.508	ENSMEUG00000000216	TRMU	99	42.813	Notamacropus_eugenii
ENSCING00000019371	-	95	49.227	ENSODEG00000014745	TRMU	94	48.974	Octodon_degus
ENSCING00000019371	-	97	47.607	ENSONIG00000009821	trmu	95	47.607	Oreochromis_niloticus
ENSCING00000019371	-	90	41.779	ENSOANG00000001891	TRMU	93	41.779	Ornithorhynchus_anatinus
ENSCING00000019371	-	90	45.924	ENSOCUG00000003664	TRMU	92	46.114	Oryctolagus_cuniculus
ENSCING00000019371	-	95	48.454	ENSORLG00000019015	trmu	94	48.454	Oryzias_latipes
ENSCING00000019371	-	95	48.454	ENSORLG00020006830	trmu	94	48.454	Oryzias_latipes_hni
ENSCING00000019371	-	95	48.454	ENSORLG00015003907	trmu	94	48.454	Oryzias_latipes_hsok
ENSCING00000019371	-	57	46.018	ENSOMEG00000015541	trmu	81	46.018	Oryzias_melastigma
ENSCING00000019371	-	95	47.938	ENSOGAG00000008096	TRMU	93	47.938	Otolemur_garnettii
ENSCING00000019371	-	92	47.861	ENSOARG00000019475	TRMU	91	47.861	Ovis_aries
ENSCING00000019371	-	95	49.100	ENSPPAG00000033944	TRMU	77	64.474	Pan_paniscus
ENSCING00000019371	-	94	49.219	ENSPPRG00000004197	TRMU	91	49.219	Panthera_pardus
ENSCING00000019371	-	65	48.519	ENSPTIG00000014122	TRMU	97	48.669	Panthera_tigris_altaica
ENSCING00000019371	-	95	49.100	ENSPTRG00000014510	TRMU	77	64.474	Pan_troglodytes
ENSCING00000019371	-	95	48.329	ENSPANG00000023074	TRMU	90	50.147	Papio_anubis
ENSCING00000019371	-	95	45.897	ENSPKIG00000002849	trmu	94	45.897	Paramormyrops_kingsleyae
ENSCING00000019371	-	90	45.380	ENSPSIG00000013020	TRMU	96	45.380	Pelodiscus_sinensis
ENSCING00000019371	-	96	47.074	ENSPMGG00000004083	trmu	94	47.074	Periophthalmus_magnuspinnatus
ENSCING00000019371	-	96	47.074	ENSPEMG00000014007	Trmu	94	47.074	Peromyscus_maniculatus_bairdii
ENSCING00000019371	-	96	47.583	ENSPCIG00000009923	TRMU	94	47.132	Phascolarctos_cinereus
ENSCING00000019371	-	91	45.013	ENSPFOG00000008197	trmu	82	45.013	Poecilia_formosa
ENSCING00000019371	-	96	46.954	ENSPLAG00000008414	trmu	94	46.954	Poecilia_latipinna
ENSCING00000019371	-	96	47.208	ENSPMEG00000004326	trmu	94	47.208	Poecilia_mexicana
ENSCING00000019371	-	96	47.462	ENSPREG00000007980	trmu	94	47.462	Poecilia_reticulata
ENSCING00000019371	-	95	48.711	ENSPPYG00000011949	TRMU	92	48.711	Pongo_abelii
ENSCING00000019371	-	93	40.106	ENSPCAG00000013462	TRMU	97	40.106	Procavia_capensis
ENSCING00000019371	-	95	47.815	ENSPCOG00000016539	TRMU	93	47.815	Propithecus_coquereli
ENSCING00000019371	-	95	44.987	ENSPVAG00000013202	TRMU	93	44.987	Pteropus_vampyrus
ENSCING00000019371	-	97	46.599	ENSPNYG00000005629	trmu	95	46.599	Pundamilia_nyererei
ENSCING00000019371	-	97	45.340	ENSPNAG00000006339	trmu	93	45.340	Pygocentrus_nattereri
ENSCING00000019371	-	96	46.565	ENSRNOG00000016465	Trmu	94	46.565	Rattus_norvegicus
ENSCING00000019371	-	95	47.815	ENSRBIG00000038973	TRMU	92	47.815	Rhinopithecus_bieti
ENSCING00000019371	-	95	48.072	ENSRROG00000004267	TRMU	92	48.072	Rhinopithecus_roxellana
ENSCING00000019371	-	93	30.402	YDL033C	SLM3	92	30.402	Saccharomyces_cerevisiae
ENSCING00000019371	-	95	48.329	ENSSBOG00000030184	TRMU	90	50.440	Saimiri_boliviensis_boliviensis
ENSCING00000019371	-	90	42.896	ENSSFOG00015020664	trmu	96	42.896	Scleropages_formosus
ENSCING00000019371	-	96	48.092	ENSSMAG00000019450	trmu	94	48.092	Scophthalmus_maximus
ENSCING00000019371	-	96	47.583	ENSSDUG00000011913	trmu	94	47.583	Seriola_dumerili
ENSCING00000019371	-	96	47.328	ENSSLDG00000011684	trmu	94	47.328	Seriola_lalandi_dorsalis
ENSCING00000019371	-	98	39.850	ENSSPUG00000017123	TRMU	94	39.850	Sphenodon_punctatus
ENSCING00000019371	-	96	48.469	ENSSPAG00000021875	trmu	94	48.469	Stegastes_partitus
ENSCING00000019371	-	95	48.586	ENSSSCG00000000007	TRMU	92	48.586	Sus_scrofa
ENSCING00000019371	-	90	45.528	ENSTGUG00000003663	-	99	45.528	Taeniopygia_guttata
ENSCING00000019371	-	96	47.970	ENSTRUG00000001231	trmu	95	47.970	Takifugu_rubripes
ENSCING00000019371	-	96	48.985	ENSTNIG00000010484	trmu	93	48.985	Tetraodon_nigroviridis
ENSCING00000019371	-	72	37.736	ENSTBEG00000011276	-	73	37.736	Tupaia_belangeri
ENSCING00000019371	-	95	49.100	ENSTTRG00000004160	TRMU	92	49.100	Tursiops_truncatus
ENSCING00000019371	-	70	50.694	ENSUAMG00000024825	TRMU	96	50.694	Ursus_americanus
ENSCING00000019371	-	93	40.526	ENSUMAG00000019079	TRMU	98	47.876	Ursus_maritimus
ENSCING00000019371	-	50	41.232	ENSVPAG00000000685	-	97	41.232	Vicugna_pacos
ENSCING00000019371	-	95	48.072	ENSVVUG00000024963	TRMU	92	48.072	Vulpes_vulpes
ENSCING00000019371	-	98	45.885	ENSXETG00000023304	trmu	94	45.885	Xenopus_tropicalis
ENSCING00000019371	-	96	46.348	ENSXCOG00000015105	trmu	94	46.348	Xiphophorus_couchianus
ENSCING00000019371	-	96	48.223	ENSXMAG00000006697	trmu	94	48.223	Xiphophorus_maculatus