EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000019633 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 919 bases
Position: chr3:1855480-1856398
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000035354	Met_10	PF02475.16	1.2e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000034136	-	900	-	ENSCINP00000035354	299 (aa)	-	H2Y0C0

Gene Model

Click here to download ENSCING00000019633's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000019633's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000019633	-	97	45.253	ENSG00000183665	TRMT12	69	45.253	Homo_sapiens
ENSCING00000019633	-	97	46.735	ENSAPOG00000011979	trmt12	71	46.735	Acanthochromis_polyacanthus
ENSCING00000019633	-	97	43.987	ENSAMEG00000019612	TRMT12	69	43.987	Ailuropoda_melanoleuca
ENSCING00000019633	-	97	46.392	ENSACIG00000012982	trmt12	74	46.392	Amphilophus_citrinellus
ENSCING00000019633	-	97	47.766	ENSAOCG00000020570	trmt12	74	47.766	Amphiprion_ocellaris
ENSCING00000019633	-	97	47.079	ENSAPEG00000006335	trmt12	74	47.079	Amphiprion_percula
ENSCING00000019633	-	97	46.075	ENSATEG00000018316	trmt12	71	46.075	Anabas_testudineus
ENSCING00000019633	-	97	48.110	ENSACLG00000001008	trmt12	71	48.110	Astatotilapia_calliptera
ENSCING00000019633	-	97	46.254	ENSAMXG00000040366	trmt12	72	46.254	Astyanax_mexicanus
ENSCING00000019633	-	97	44.479	ENSBTAG00000020398	TRMT12	67	44.479	Bos_taurus
ENSCING00000019633	-	70	40.952	WBGene00009586	F40F9.10	51	38.655	Caenorhabditis_elegans
ENSCING00000019633	-	97	45.253	ENSCJAG00000022174	TRMT12	69	45.253	Callithrix_jacchus
ENSCING00000019633	-	97	45.886	ENSCAFG00000001040	TRMT12	71	45.886	Canis_familiaris
ENSCING00000019633	-	97	45.886	ENSCAFG00020006500	TRMT12	71	45.886	Canis_lupus_dingo
ENSCING00000019633	-	97	45.397	ENSCHIG00000016574	TRMT12	71	45.397	Capra_hircus
ENSCING00000019633	-	97	45.048	ENSCPOG00000026520	TRMT12	70	45.048	Cavia_porcellus
ENSCING00000019633	-	97	45.253	ENSCSAG00000018615	TRMT12	69	45.253	Chlorocebus_sabaeus
ENSCING00000019633	-	97	42.813	ENSCPBG00000014290	TRMT12	70	42.813	Chrysemys_picta_bellii
ENSCING00000019633	-	98	56.507	ENSCSAVG00000000415	-	91	56.507	Ciona_savignyi
ENSCING00000019633	-	97	44.595	ENSCGRG00001014834	Trmt12	69	44.595	Cricetulus_griseus_chok1gshd
ENSCING00000019633	-	97	47.138	ENSCSEG00000002675	trmt12	68	47.138	Cynoglossus_semilaevis
ENSCING00000019633	-	97	48.973	ENSCVAG00000005590	trmt12	71	48.973	Cyprinodon_variegatus
ENSCING00000019633	-	97	47.475	ENSDARG00000060338	trmt12	72	47.475	Danio_rerio
ENSCING00000019633	-	97	44.620	ENSETEG00000009373	TRMT12	69	44.620	Echinops_telfairi
ENSCING00000019633	-	97	44.304	ENSEASG00005022441	TRMT12	71	44.304	Equus_asinus_asinus
ENSCING00000019633	-	97	45.541	ENSEEUG00000004844	TRMT12	69	45.541	Erinaceus_europaeus
ENSCING00000019633	-	97	44.407	ENSELUG00000004240	trmt12	77	44.407	Esox_lucius
ENSCING00000019633	-	86	43.929	ENSFALG00000003825	TRMT12	93	50.490	Ficedula_albicollis
ENSCING00000019633	-	97	43.987	ENSFDAG00000016647	TRMT12	71	43.987	Fukomys_damarensis
ENSCING00000019633	-	97	38.699	ENSFHEG00000017338	trmt12	73	38.699	Fundulus_heteroclitus
ENSCING00000019633	-	97	42.492	ENSGALG00000006773	TRMT12	67	42.492	Gallus_gallus
ENSCING00000019633	-	97	47.079	ENSGAFG00000020056	trmt12	71	47.079	Gambusia_affinis
ENSCING00000019633	-	97	43.986	ENSGACG00000017351	trmt12	73	43.986	Gasterosteus_aculeatus
ENSCING00000019633	-	97	42.284	ENSGAGG00000006032	TRMT12	72	42.284	Gopherus_agassizii
ENSCING00000019633	-	97	47.766	ENSHBUG00000016412	trmt12	71	47.766	Haplochromis_burtoni
ENSCING00000019633	-	97	45.570	ENSHGLG00000020498	TRMT12	71	45.570	Heterocephalus_glaber_female
ENSCING00000019633	-	97	45.570	ENSHGLG00100020132	TRMT12	71	45.570	Heterocephalus_glaber_male
ENSCING00000019633	-	97	46.048	ENSHCOG00000005050	trmt12	83	46.048	Hippocampus_comes
ENSCING00000019633	-	97	46.154	ENSIPUG00000018011	trmt12	67	46.154	Ictalurus_punctatus
ENSCING00000019633	-	97	43.987	ENSSTOG00000030617	TRMT12	71	43.987	Ictidomys_tridecemlineatus
ENSCING00000019633	-	97	45.051	ENSKMAG00000000891	trmt12	71	45.051	Kryptolebias_marmoratus
ENSCING00000019633	-	70	47.926	ENSLBEG00000017456	-	85	47.926	Labrus_bergylta
ENSCING00000019633	-	97	45.791	ENSLBEG00000028712	trmt12	72	45.791	Labrus_bergylta
ENSCING00000019633	-	97	45.171	ENSLACG00000015869	TRMT12	70	45.171	Latimeria_chalumnae
ENSCING00000019633	-	97	43.434	ENSLOCG00000015290	trmt12	71	43.434	Lepisosteus_oculatus
ENSCING00000019633	-	97	44.937	ENSLAFG00000012519	TRMT12	71	44.937	Loxodonta_africana
ENSCING00000019633	-	97	45.253	ENSMMUG00000015490	TRMT12	70	45.253	Macaca_mulatta
ENSCING00000019633	-	97	48.299	ENSMAMG00000020311	trmt12	71	48.299	Mastacembelus_armatus
ENSCING00000019633	-	97	48.110	ENSMZEG00005007349	trmt12	71	48.110	Maylandia_zebra
ENSCING00000019633	-	97	42.492	ENSMGAG00000004174	TRMT12	70	42.492	Meleagris_gallopavo
ENSCING00000019633	-	97	47.279	ENSMMOG00000000412	trmt12	73	47.279	Mola_mola
ENSCING00000019633	-	97	44.554	ENSMODG00000021403	-	69	44.554	Monodelphis_domestica
ENSCING00000019633	-	97	44.554	ENSMODG00000011798	-	63	44.554	Monodelphis_domestica
ENSCING00000019633	-	97	46.259	ENSMALG00000008668	trmt12	71	46.259	Monopterus_albus
ENSCING00000019633	-	97	44.444	MGP_CAROLIEiJ_G0019820	Trmt12	70	44.444	Mus_caroli
ENSCING00000019633	-	97	44.762	ENSMUSG00000037085	Trmt12	70	44.762	Mus_musculus
ENSCING00000019633	-	97	43.810	MGP_PahariEiJ_G0019829	Trmt12	70	43.810	Mus_pahari
ENSCING00000019633	-	97	44.127	MGP_SPRETEiJ_G0020717	Trmt12	70	44.127	Mus_spretus
ENSCING00000019633	-	97	44.937	ENSMPUG00000019150	TRMT12	70	44.937	Mustela_putorius_furo
ENSCING00000019633	-	97	44.620	ENSMLUG00000003753	TRMT12	71	44.620	Myotis_lucifugus
ENSCING00000019633	-	97	43.038	ENSNGAG00000014548	Trmt12	71	43.038	Nannospalax_galili
ENSCING00000019633	-	97	47.766	ENSNBRG00000021510	trmt12	72	47.766	Neolamprologus_brichardi
ENSCING00000019633	-	97	40.823	ENSOPRG00000008067	TRMT12	70	40.823	Ochotona_princeps
ENSCING00000019633	-	97	43.354	ENSODEG00000018933	TRMT12	71	43.354	Octodon_degus
ENSCING00000019633	-	97	48.973	ENSONIG00000002614	trmt12	71	48.973	Oreochromis_niloticus
ENSCING00000019633	-	97	41.748	ENSOANG00000009987	TRMT12	70	41.748	Ornithorhynchus_anatinus
ENSCING00000019633	-	77	51.073	ENSOCUG00000026379	TRMT12	52	51.073	Oryctolagus_cuniculus
ENSCING00000019633	-	97	49.141	ENSORLG00000001280	trmt12	72	49.141	Oryzias_latipes
ENSCING00000019633	-	97	49.141	ENSORLG00020000708	trmt12	72	49.141	Oryzias_latipes_hni
ENSCING00000019633	-	97	49.141	ENSORLG00015012344	trmt12	72	49.141	Oryzias_latipes_hsok
ENSCING00000019633	-	97	48.454	ENSOMEG00000015267	trmt12	70	48.454	Oryzias_melastigma
ENSCING00000019633	-	97	45.886	ENSOGAG00000015845	TRMT12	71	45.886	Otolemur_garnettii
ENSCING00000019633	-	97	48.805	ENSPKIG00000004640	trmt12	73	48.805	Paramormyrops_kingsleyae
ENSCING00000019633	-	78	44.776	ENSPSIG00000003476	TRMT12	97	44.776	Pelodiscus_sinensis
ENSCING00000019633	-	97	49.147	ENSPMGG00000016356	trmt12	70	49.147	Periophthalmus_magnuspinnatus
ENSCING00000019633	-	97	43.234	ENSPCIG00000002967	TRMT12	63	43.234	Phascolarctos_cinereus
ENSCING00000019633	-	97	48.110	ENSPFOG00000016931	trmt12	70	48.110	Poecilia_formosa
ENSCING00000019633	-	97	48.797	ENSPLAG00000020621	trmt12	71	48.797	Poecilia_latipinna
ENSCING00000019633	-	97	48.454	ENSPMEG00000000818	trmt12	71	48.454	Poecilia_mexicana
ENSCING00000019633	-	97	47.079	ENSPREG00000011621	trmt12	72	47.423	Poecilia_reticulata
ENSCING00000019633	-	97	45.253	ENSPPYG00000018866	TRMT12	69	45.253	Pongo_abelii
ENSCING00000019633	-	97	43.354	ENSPCAG00000000556	TRMT12	70	43.354	Procavia_capensis
ENSCING00000019633	-	97	44.304	ENSPVAG00000009149	TRMT12	70	44.304	Pteropus_vampyrus
ENSCING00000019633	-	97	47.079	ENSPNYG00000010696	trmt12	74	47.079	Pundamilia_nyererei
ENSCING00000019633	-	97	47.697	ENSPNAG00000019028	trmt12	71	47.697	Pygocentrus_nattereri
ENSCING00000019633	-	97	44.444	ENSRNOG00000008978	Trmt12	71	44.444	Rattus_norvegicus
ENSCING00000019633	-	97	44.224	ENSSHAG00000003345	TRMT12	68	44.224	Sarcophilus_harrisii
ENSCING00000019633	-	97	45.183	ENSSFOG00015006090	trmt12	71	45.183	Scleropages_formosus
ENSCING00000019633	-	97	46.959	ENSSMAG00000013247	trmt12	72	46.959	Scophthalmus_maximus
ENSCING00000019633	-	97	46.075	ENSSDUG00000006168	trmt12	72	46.075	Seriola_dumerili
ENSCING00000019633	-	97	46.758	ENSSLDG00000025007	trmt12	71	46.758	Seriola_lalandi_dorsalis
ENSCING00000019633	-	97	40.123	ENSSPUG00000005321	TRMT12	70	40.123	Sphenodon_punctatus
ENSCING00000019633	-	97	47.079	ENSSPAG00000009435	trmt12	69	47.079	Stegastes_partitus
ENSCING00000019633	-	97	42.718	ENSTGUG00000002280	TRMT12	74	43.366	Taeniopygia_guttata
ENSCING00000019633	-	97	47.279	ENSTRUG00000011548	trmt12	71	47.279	Takifugu_rubripes
ENSCING00000019633	-	97	47.959	ENSTNIG00000016866	trmt12	70	47.959	Tetraodon_nigroviridis
ENSCING00000019633	-	97	44.937	ENSUAMG00000002067	TRMT12	71	44.937	Ursus_americanus
ENSCING00000019633	-	97	46.057	ENSVPAG00000006519	TRMT12	70	46.057	Vicugna_pacos
ENSCING00000019633	-	97	45.570	ENSVVUG00000016790	TRMT12	70	45.570	Vulpes_vulpes
ENSCING00000019633	-	97	50.172	ENSXETG00000009641	trmt12	67	50.172	Xenopus_tropicalis
ENSCING00000019633	-	97	47.603	ENSXCOG00000016505	trmt12	75	47.603	Xiphophorus_couchianus
ENSCING00000019633	-	97	47.945	ENSXMAG00000025318	trmt12	71	47.945	Xiphophorus_maculatus