EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000019779 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3980 bases
Position: chrHT000098.1:347199-351178
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000033203	TUDOR	PF00567.24	4.2e-10	1	1
ENSCINP00000033203	DEAD	PF00270.29	2.7e-08	1	1
ENSCINP00000033203	HA2	PF04408.23	9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000030647	-	3660	-	ENSCINP00000033203	1220 (aa)	-	H2XU69

Gene Model

Click here to download ENSCING00000019779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000019779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000019779	-	99	38.569	ENSG00000156414	TDRD9	99	36.434	Homo_sapiens
ENSCING00000019779	-	96	39.283	ENSAPOG00000015220	tdrd9	92	39.446	Acanthochromis_polyacanthus
ENSCING00000019779	-	99	39.236	ENSAMEG00000018095	TDRD9	90	39.236	Ailuropoda_melanoleuca
ENSCING00000019779	-	91	52.716	ENSACIG00000024299	tdrd9	96	52.716	Amphilophus_citrinellus
ENSCING00000019779	-	96	39.081	ENSAOCG00000007386	tdrd9	94	39.081	Amphiprion_ocellaris
ENSCING00000019779	-	96	38.339	ENSAPEG00000023023	tdrd9	92	38.339	Amphiprion_percula
ENSCING00000019779	-	96	38.480	ENSATEG00000015827	tdrd9	94	38.480	Anabas_testudineus
ENSCING00000019779	-	95	36.557	ENSAPLG00000007429	TDRD9	99	36.557	Anas_platyrhynchos
ENSCING00000019779	-	99	38.919	ENSACAG00000010862	TDRD9	93	38.919	Anolis_carolinensis
ENSCING00000019779	-	99	37.480	ENSANAG00000020949	TDRD9	96	37.480	Aotus_nancymaae
ENSCING00000019779	-	96	38.060	ENSACLG00000020660	tdrd9	90	38.060	Astatotilapia_calliptera
ENSCING00000019779	-	93	36.620	ENSAMXG00000021360	tdrd9	93	36.785	Astyanax_mexicanus
ENSCING00000019779	-	99	37.392	ENSBTAG00000020402	TDRD9	93	38.468	Bos_taurus
ENSCING00000019779	-	99	38.712	ENSCJAG00000017235	TDRD9	95	38.712	Callithrix_jacchus
ENSCING00000019779	-	90	36.865	ENSCAFG00000018311	TDRD9	99	37.337	Canis_familiaris
ENSCING00000019779	-	99	38.928	ENSCAFG00020008631	TDRD9	99	36.087	Canis_lupus_dingo
ENSCING00000019779	-	99	38.682	ENSCHIG00000011541	TDRD9	91	38.760	Capra_hircus
ENSCING00000019779	-	99	38.486	ENSTSYG00000003253	TDRD9	93	37.636	Carlito_syrichta
ENSCING00000019779	-	99	37.051	ENSCAPG00000009518	TDRD9	91	37.051	Cavia_aperea
ENSCING00000019779	-	99	39.141	ENSCPOG00000002760	TDRD9	92	39.141	Cavia_porcellus
ENSCING00000019779	-	99	38.624	ENSCCAG00000022528	TDRD9	91	38.624	Cebus_capucinus
ENSCING00000019779	-	99	38.776	ENSCATG00000032905	TDRD9	91	38.776	Cercocebus_atys
ENSCING00000019779	-	99	38.846	ENSCLAG00000006616	TDRD9	92	38.846	Chinchilla_lanigera
ENSCING00000019779	-	99	38.763	ENSCSAG00000009835	TDRD9	91	38.763	Chlorocebus_sabaeus
ENSCING00000019779	-	95	37.102	ENSCPBG00000020203	TDRD9	92	37.102	Chrysemys_picta_bellii
ENSCING00000019779	-	99	73.399	ENSCSAVG00000002146	-	100	73.399	Ciona_savignyi
ENSCING00000019779	-	99	39.007	ENSCANG00000031870	TDRD9	95	39.007	Colobus_angolensis_palliatus
ENSCING00000019779	-	99	39.266	ENSCGRG00001023336	Tdrd9	90	39.263	Cricetulus_griseus_chok1gshd
ENSCING00000019779	-	99	39.266	ENSCGRG00000004013	Tdrd9	90	39.263	Cricetulus_griseus_crigri
ENSCING00000019779	-	96	38.537	ENSCSEG00000001411	tdrd9	92	38.537	Cynoglossus_semilaevis
ENSCING00000019779	-	100	35.253	ENSCVAG00000007427	tdrd9	99	35.253	Cyprinodon_variegatus
ENSCING00000019779	-	99	37.637	ENSDARG00000013453	tdrd9	93	37.637	Danio_rerio
ENSCING00000019779	-	99	38.976	ENSDORG00000015167	Tdrd9	90	38.976	Dipodomys_ordii
ENSCING00000019779	-	99	32.952	FBgn0003483	spn-E	88	32.952	Drosophila_melanogaster
ENSCING00000019779	-	64	36.342	ENSETEG00000015130	TDRD9	89	36.342	Echinops_telfairi
ENSCING00000019779	-	93	39.292	ENSEBUG00000010711	tdrd9	87	39.292	Eptatretus_burgeri
ENSCING00000019779	-	99	38.885	ENSEASG00005004203	TDRD9	99	34.721	Equus_asinus_asinus
ENSCING00000019779	-	99	38.740	ENSECAG00000023843	TDRD9	97	36.907	Equus_caballus
ENSCING00000019779	-	99	37.875	ENSELUG00000010798	tdrd9	97	37.596	Esox_lucius
ENSCING00000019779	-	99	38.932	ENSFCAG00000013807	TDRD9	91	39.028	Felis_catus
ENSCING00000019779	-	99	37.371	ENSFALG00000002911	TDRD9	99	37.371	Ficedula_albicollis
ENSCING00000019779	-	99	39.319	ENSFDAG00000004582	TDRD9	91	39.319	Fukomys_damarensis
ENSCING00000019779	-	90	44.993	ENSFHEG00000008883	tdrd9	99	43.860	Fundulus_heteroclitus
ENSCING00000019779	-	85	47.573	ENSGMOG00000010725	tdrd9	88	47.573	Gadus_morhua
ENSCING00000019779	-	65	35.714	ENSGALG00000011565	TDRD9	94	35.714	Gallus_gallus
ENSCING00000019779	-	95	36.992	ENSGACG00000008322	tdrd9	97	50.382	Gasterosteus_aculeatus
ENSCING00000019779	-	99	38.474	ENSGGOG00000000812	TDRD9	91	38.474	Gorilla_gorilla
ENSCING00000019779	-	64	34.541	ENSHBUG00000022779	tdrd9	94	34.541	Haplochromis_burtoni
ENSCING00000019779	-	99	38.485	ENSHGLG00000007727	TDRD9	91	38.485	Heterocephalus_glaber_female
ENSCING00000019779	-	99	38.485	ENSHGLG00100019237	TDRD9	91	38.485	Heterocephalus_glaber_male
ENSCING00000019779	-	84	35.077	ENSHCOG00000020886	tdrd9	97	35.077	Hippocampus_comes
ENSCING00000019779	-	99	37.098	ENSIPUG00000002814	tdrd9	94	37.098	Ictalurus_punctatus
ENSCING00000019779	-	99	38.954	ENSSTOG00000007890	TDRD9	90	38.954	Ictidomys_tridecemlineatus
ENSCING00000019779	-	99	38.967	ENSJJAG00000022462	Tdrd9	90	38.967	Jaculus_jaculus
ENSCING00000019779	-	95	38.245	ENSKMAG00000005523	tdrd9	95	38.235	Kryptolebias_marmoratus
ENSCING00000019779	-	99	37.442	ENSLBEG00000022006	tdrd9	95	37.191	Labrus_bergylta
ENSCING00000019779	-	99	37.766	ENSLACG00000002257	TDRD9	98	37.766	Latimeria_chalumnae
ENSCING00000019779	-	97	37.470	ENSLOCG00000009992	tdrd9	98	37.470	Lepisosteus_oculatus
ENSCING00000019779	-	95	38.216	ENSLAFG00000007580	TDRD9	92	48.584	Loxodonta_africana
ENSCING00000019779	-	99	38.758	ENSMFAG00000001293	TDRD9	92	38.758	Macaca_fascicularis
ENSCING00000019779	-	99	38.758	ENSMMUG00000006243	TDRD9	95	38.758	Macaca_mulatta
ENSCING00000019779	-	99	38.758	ENSMNEG00000044098	TDRD9	91	38.758	Macaca_nemestrina
ENSCING00000019779	-	99	38.776	ENSMLEG00000032473	TDRD9	95	38.776	Mandrillus_leucophaeus
ENSCING00000019779	-	99	38.367	ENSMAMG00000002068	tdrd9	95	38.367	Mastacembelus_armatus
ENSCING00000019779	-	96	39.739	ENSMZEG00005007746	tdrd9	90	39.739	Maylandia_zebra
ENSCING00000019779	-	95	37.954	ENSMGAG00000013431	TDRD9	99	37.295	Meleagris_gallopavo
ENSCING00000019779	-	99	37.825	ENSMAUG00000020617	Tdrd9	90	37.825	Mesocricetus_auratus
ENSCING00000019779	-	99	39.168	ENSMICG00000000428	TDRD9	91	39.168	Microcebus_murinus
ENSCING00000019779	-	99	39.188	ENSMOCG00000017012	Tdrd9	90	39.188	Microtus_ochrogaster
ENSCING00000019779	-	98	39.434	ENSMMOG00000013849	tdrd9	95	39.434	Mola_mola
ENSCING00000019779	-	67	33.634	ENSMODG00000013609	TDRD9	99	33.634	Monodelphis_domestica
ENSCING00000019779	-	98	38.376	ENSMALG00000008927	tdrd9	92	38.370	Monopterus_albus
ENSCING00000019779	-	99	38.872	MGP_CAROLIEiJ_G0018145	Tdrd9	97	51.521	Mus_caroli
ENSCING00000019779	-	99	38.936	ENSMUSG00000054003	Tdrd9	97	51.423	Mus_musculus
ENSCING00000019779	-	99	38.979	MGP_PahariEiJ_G0029902	Tdrd9	97	51.048	Mus_pahari
ENSCING00000019779	-	99	38.936	MGP_SPRETEiJ_G0018994	Tdrd9	97	51.331	Mus_spretus
ENSCING00000019779	-	92	37.722	ENSMPUG00000002286	TDRD9	99	37.722	Mustela_putorius_furo
ENSCING00000019779	-	86	39.726	ENSMLUG00000011984	TDRD9	95	39.483	Myotis_lucifugus
ENSCING00000019779	-	99	39.389	ENSNGAG00000021858	Tdrd9	91	39.389	Nannospalax_galili
ENSCING00000019779	-	96	38.754	ENSNBRG00000008735	tdrd9	96	38.754	Neolamprologus_brichardi
ENSCING00000019779	-	99	38.635	ENSNLEG00000016251	TDRD9	90	38.635	Nomascus_leucogenys
ENSCING00000019779	-	64	32.439	ENSMEUG00000014017	-	89	32.439	Notamacropus_eugenii
ENSCING00000019779	-	99	39.171	ENSODEG00000002255	TDRD9	91	39.076	Octodon_degus
ENSCING00000019779	-	96	39.967	ENSONIG00000020126	tdrd9	90	39.967	Oreochromis_niloticus
ENSCING00000019779	-	84	37.190	ENSOANG00000000797	TDRD9	99	37.190	Ornithorhynchus_anatinus
ENSCING00000019779	-	99	37.568	ENSOCUG00000014788	TDRD9	94	37.724	Oryctolagus_cuniculus
ENSCING00000019779	-	80	33.882	ENSORLG00000015842	tdrd9	93	34.110	Oryzias_latipes
ENSCING00000019779	-	96	38.211	ENSORLG00020009475	tdrd9	99	37.747	Oryzias_latipes_hni
ENSCING00000019779	-	84	35.024	ENSORLG00015008417	tdrd9	97	35.024	Oryzias_latipes_hsok
ENSCING00000019779	-	99	38.328	ENSOMEG00000006369	tdrd9	94	38.328	Oryzias_melastigma
ENSCING00000019779	-	99	38.659	ENSOGAG00000007626	TDRD9	89	38.659	Otolemur_garnettii
ENSCING00000019779	-	97	38.942	ENSOARG00000006675	TDRD9	91	39.314	Ovis_aries
ENSCING00000019779	-	99	38.647	ENSPPAG00000027180	TDRD9	95	38.647	Pan_paniscus
ENSCING00000019779	-	99	38.612	ENSPPRG00000021286	TDRD9	91	38.635	Panthera_pardus
ENSCING00000019779	-	99	38.311	ENSPTIG00000017411	TDRD9	92	38.480	Panthera_tigris_altaica
ENSCING00000019779	-	99	38.569	ENSPTRG00000006765	TDRD9	91	38.569	Pan_troglodytes
ENSCING00000019779	-	99	38.697	ENSPANG00000004811	TDRD9	99	33.960	Papio_anubis
ENSCING00000019779	-	99	38.051	ENSPKIG00000017763	tdrd9	94	38.051	Paramormyrops_kingsleyae
ENSCING00000019779	-	99	38.712	ENSPSIG00000010466	TDRD9	98	38.712	Pelodiscus_sinensis
ENSCING00000019779	-	94	39.397	ENSPMGG00000010265	tdrd9	96	39.397	Periophthalmus_magnuspinnatus
ENSCING00000019779	-	99	39.194	ENSPEMG00000012496	Tdrd9	90	39.194	Peromyscus_maniculatus_bairdii
ENSCING00000019779	-	70	32.859	ENSPCIG00000016427	TDRD9	99	32.859	Phascolarctos_cinereus
ENSCING00000019779	-	100	37.963	ENSPFOG00000002400	tdrd9	99	37.963	Poecilia_formosa
ENSCING00000019779	-	93	36.864	ENSPLAG00000005202	tdrd9	100	36.864	Poecilia_latipinna
ENSCING00000019779	-	93	36.697	ENSPMEG00000017922	tdrd9	100	36.697	Poecilia_mexicana
ENSCING00000019779	-	81	35.300	ENSPREG00000015184	tdrd9	96	36.309	Poecilia_reticulata
ENSCING00000019779	-	65	37.380	ENSPPYG00000006180	-	90	37.380	Pongo_abelii
ENSCING00000019779	-	54	45.730	ENSPCAG00000015416	-	79	45.730	Procavia_capensis
ENSCING00000019779	-	93	37.815	ENSPCOG00000015323	TDRD9	89	37.879	Propithecus_coquereli
ENSCING00000019779	-	96	38.880	ENSPNYG00000022319	tdrd9	95	38.625	Pundamilia_nyererei
ENSCING00000019779	-	99	38.485	ENSPNAG00000010714	tdrd9	96	38.920	Pygocentrus_nattereri
ENSCING00000019779	-	99	38.503	ENSRNOG00000053631	Tdrd9	90	38.503	Rattus_norvegicus
ENSCING00000019779	-	99	38.697	ENSRBIG00000040614	TDRD9	99	36.142	Rhinopithecus_bieti
ENSCING00000019779	-	99	38.715	ENSRROG00000037241	TDRD9	91	38.715	Rhinopithecus_roxellana
ENSCING00000019779	-	99	38.937	ENSSBOG00000027466	TDRD9	95	38.937	Saimiri_boliviensis_boliviensis
ENSCING00000019779	-	90	37.340	ENSSHAG00000013742	TDRD9	99	37.340	Sarcophilus_harrisii
ENSCING00000019779	-	96	38.029	ENSSFOG00015012742	tdrd9	87	42.286	Scleropages_formosus
ENSCING00000019779	-	99	37.807	ENSSMAG00000001831	tdrd9	99	37.117	Scophthalmus_maximus
ENSCING00000019779	-	98	37.780	ENSSDUG00000000483	tdrd9	97	37.780	Seriola_dumerili
ENSCING00000019779	-	98	38.565	ENSSLDG00000011875	tdrd9	95	38.565	Seriola_lalandi_dorsalis
ENSCING00000019779	-	97	37.276	ENSSPUG00000004504	TDRD9	98	37.276	Sphenodon_punctatus
ENSCING00000019779	-	96	37.028	ENSSPAG00000012556	tdrd9	93	37.028	Stegastes_partitus
ENSCING00000019779	-	99	39.283	ENSSSCG00000002552	TDRD9	90	39.389	Sus_scrofa
ENSCING00000019779	-	95	36.026	ENSTGUG00000012887	-	99	36.026	Taeniopygia_guttata
ENSCING00000019779	-	96	35.589	ENSTRUG00000009586	tdrd9	92	35.589	Takifugu_rubripes
ENSCING00000019779	-	95	35.633	ENSTNIG00000017353	tdrd9	99	35.528	Tetraodon_nigroviridis
ENSCING00000019779	-	65	37.910	ENSTTRG00000006405	TDRD9	90	37.910	Tursiops_truncatus
ENSCING00000019779	-	99	38.730	ENSUAMG00000017361	TDRD9	99	36.147	Ursus_americanus
ENSCING00000019779	-	99	38.575	ENSUMAG00000024822	TDRD9	98	38.033	Ursus_maritimus
ENSCING00000019779	-	99	38.998	ENSVVUG00000002584	TDRD9	99	38.998	Vulpes_vulpes
ENSCING00000019779	-	93	37.300	ENSXETG00000023069	tdrd9	99	37.300	Xenopus_tropicalis
ENSCING00000019779	-	100	37.674	ENSXCOG00000009311	tdrd9	99	37.674	Xiphophorus_couchianus
ENSCING00000019779	-	100	37.674	ENSXMAG00000018300	tdrd9	99	37.674	Xiphophorus_maculatus