EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000019824 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 526 bases
Position: chr7:4967013-4967538
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000036300	zf-RanBP	PF00641.18	3.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000033117	-	456	-	ENSCINP00000036300	152 (aa)	-	H2Y315

Gene Model

Click here to download ENSCING00000019824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000019824's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000019824	-	86	43.066	ENSG00000015153	YAF2	98	54.545	Homo_sapiens
ENSCING00000019824	-	86	43.382	ENSAPOG00000012651	yaf2	72	43.382	Acanthochromis_polyacanthus
ENSCING00000019824	-	86	47.407	ENSAPOG00000016986	YAF2	73	47.407	Acanthochromis_polyacanthus
ENSCING00000019824	-	74	47.899	ENSAMEG00000013846	YAF2	72	48.361	Ailuropoda_melanoleuca
ENSCING00000019824	-	86	47.101	ENSACIG00000002635	YAF2	73	47.101	Amphilophus_citrinellus
ENSCING00000019824	-	86	34.969	ENSACIG00000021280	rybpb	75	37.500	Amphilophus_citrinellus
ENSCING00000019824	-	86	42.857	ENSAOCG00000024572	YAF2	73	42.857	Amphiprion_ocellaris
ENSCING00000019824	-	86	43.382	ENSAOCG00000015759	yaf2	72	43.382	Amphiprion_ocellaris
ENSCING00000019824	-	86	42.857	ENSAPEG00000005856	YAF2	73	42.857	Amphiprion_percula
ENSCING00000019824	-	79	32.727	ENSAPEG00000021704	rybpb	63	34.706	Amphiprion_percula
ENSCING00000019824	-	86	43.382	ENSAPEG00000017939	yaf2	72	43.382	Amphiprion_percula
ENSCING00000019824	-	86	45.985	ENSATEG00000018504	YAF2	73	45.985	Anabas_testudineus
ENSCING00000019824	-	86	42.647	ENSATEG00000012513	yaf2	72	42.647	Anabas_testudineus
ENSCING00000019824	-	86	37.714	ENSACAG00000014789	RYBP	76	36.313	Anolis_carolinensis
ENSCING00000019824	-	86	43.796	ENSACAG00000003204	YAF2	76	44.604	Anolis_carolinensis
ENSCING00000019824	-	86	38.065	ENSANAG00000021963	YAF2	78	37.975	Aotus_nancymaae
ENSCING00000019824	-	86	41.176	ENSACLG00000001098	yaf2	72	43.382	Astatotilapia_calliptera
ENSCING00000019824	-	86	46.377	ENSACLG00000000456	YAF2	73	46.377	Astatotilapia_calliptera
ENSCING00000019824	-	86	35.838	ENSAMXG00000034604	rybpb	77	36.416	Astyanax_mexicanus
ENSCING00000019824	-	86	45.588	ENSAMXG00000036088	YAF2	73	45.588	Astyanax_mexicanus
ENSCING00000019824	-	88	41.429	ENSAMXG00000035723	YAF2	74	42.857	Astyanax_mexicanus
ENSCING00000019824	-	86	43.066	ENSBTAG00000015025	YAF2	76	43.571	Bos_taurus
ENSCING00000019824	-	86	43.066	ENSCJAG00000017762	YAF2	78	55.769	Callithrix_jacchus
ENSCING00000019824	-	74	39.860	ENSCAFG00000009789	YAF2	72	40.411	Canis_familiaris
ENSCING00000019824	-	86	41.353	ENSCHIG00000025941	YAF2	76	43.571	Capra_hircus
ENSCING00000019824	-	74	47.899	ENSCPOG00000015156	YAF2	69	48.361	Cavia_porcellus
ENSCING00000019824	-	86	43.066	ENSCCAG00000018849	YAF2	78	55.769	Cebus_capucinus
ENSCING00000019824	-	86	43.796	ENSCATG00000034263	YAF2	97	48.611	Cercocebus_atys
ENSCING00000019824	-	73	47.458	ENSCHOG00000002266	YAF2	73	47.934	Choloepus_hoffmanni
ENSCING00000019824	-	88	42.857	ENSCPBG00000015509	YAF2	95	55.769	Chrysemys_picta_bellii
ENSCING00000019824	-	86	43.796	ENSCANG00000042756	YAF2	97	48.611	Colobus_angolensis_palliatus
ENSCING00000019824	-	84	44.444	ENSCGRG00001021765	Yaf2	76	44.286	Cricetulus_griseus_chok1gshd
ENSCING00000019824	-	86	43.382	ENSCSEG00000010509	yaf2	72	43.382	Cynoglossus_semilaevis
ENSCING00000019824	-	86	34.091	ENSCSEG00000007805	rybpb	77	34.091	Cynoglossus_semilaevis
ENSCING00000019824	-	86	43.478	ENSCSEG00000004331	YAF2	73	44.928	Cynoglossus_semilaevis
ENSCING00000019824	-	86	37.037	ENSCVAG00000020045	rybpb	75	37.037	Cyprinodon_variegatus
ENSCING00000019824	-	86	43.382	ENSCVAG00000001056	yaf2	72	43.382	Cyprinodon_variegatus
ENSCING00000019824	-	86	45.390	ENSCVAG00000002793	YAF2	86	44.512	Cyprinodon_variegatus
ENSCING00000019824	-	86	41.353	ENSDARG00000015966	yaf2	73	41.353	Danio_rerio
ENSCING00000019824	-	81	40.764	ENSDORG00000015021	Rybp	72	41.401	Dipodomys_ordii
ENSCING00000019824	-	74	47.899	ENSDORG00000024619	Yaf2	70	48.361	Dipodomys_ordii
ENSCING00000019824	-	78	54.098	FBgn0034763	RYBP	81	53.600	Drosophila_melanogaster
ENSCING00000019824	-	72	37.168	ENSETEG00000001634	-	71	37.069	Echinops_telfairi
ENSCING00000019824	-	88	43.243	ENSEBUG00000010088	RYBP	61	44.375	Eptatretus_burgeri
ENSCING00000019824	-	84	48.031	ENSEBUG00000004738	RYBP	65	51.261	Eptatretus_burgeri
ENSCING00000019824	-	86	43.796	ENSEASG00005023490	YAF2	76	44.286	Equus_asinus_asinus
ENSCING00000019824	-	72	48.276	ENSEEUG00000004713	YAF2	72	48.739	Erinaceus_europaeus
ENSCING00000019824	-	79	34.177	ENSEEUG00000011620	-	74	34.969	Erinaceus_europaeus
ENSCING00000019824	-	86	44.118	ENSELUG00000009802	YAF2	73	44.118	Esox_lucius
ENSCING00000019824	-	86	44.118	ENSELUG00000020855	yaf2	74	44.118	Esox_lucius
ENSCING00000019824	-	86	43.939	ENSELUG00000003503	rybpb	72	43.939	Esox_lucius
ENSCING00000019824	-	86	43.066	ENSFCAG00000030082	YAF2	76	43.571	Felis_catus
ENSCING00000019824	-	86	46.324	ENSFHEG00000005397	YAF2	86	44.099	Fundulus_heteroclitus
ENSCING00000019824	-	86	42.647	ENSFHEG00000007387	yaf2	72	42.647	Fundulus_heteroclitus
ENSCING00000019824	-	86	41.353	ENSGALG00000009540	YAF2	76	43.571	Gallus_gallus
ENSCING00000019824	-	86	42.647	ENSGAFG00000017418	yaf2	72	42.647	Gambusia_affinis
ENSCING00000019824	-	86	46.667	ENSGAFG00000001176	YAF2	73	47.445	Gambusia_affinis
ENSCING00000019824	-	88	42.857	ENSGAGG00000000538	YAF2	76	43.571	Gopherus_agassizii
ENSCING00000019824	-	74	47.899	ENSGGOG00000007230	-	69	48.361	Gorilla_gorilla
ENSCING00000019824	-	86	41.176	ENSHBUG00000006345	yaf2	72	43.382	Haplochromis_burtoni
ENSCING00000019824	-	86	46.377	ENSHBUG00000001690	YAF2	73	46.377	Haplochromis_burtoni
ENSCING00000019824	-	88	42.857	ENSHGLG00000001299	YAF2	76	43.571	Heterocephalus_glaber_female
ENSCING00000019824	-	53	51.250	ENSHGLG00000009354	-	69	34.932	Heterocephalus_glaber_female
ENSCING00000019824	-	76	47.541	ENSHGLG00100016138	YAF2	70	48.361	Heterocephalus_glaber_male
ENSCING00000019824	-	53	51.250	ENSHGLG00100001264	-	69	34.932	Heterocephalus_glaber_male
ENSCING00000019824	-	80	43.750	ENSHCOG00000006027	YAF2	63	44.961	Hippocampus_comes
ENSCING00000019824	-	86	44.118	ENSHCOG00000009074	yaf2	72	44.118	Hippocampus_comes
ENSCING00000019824	-	86	46.269	ENSIPUG00000007091	rybpa	88	49.180	Ictalurus_punctatus
ENSCING00000019824	-	86	39.053	ENSIPUG00000001221	rybpb	76	39.053	Ictalurus_punctatus
ENSCING00000019824	-	86	43.066	ENSSTOG00000007224	YAF2	76	43.571	Ictidomys_tridecemlineatus
ENSCING00000019824	-	84	45.865	ENSKMAG00000005787	YAF2	73	45.926	Kryptolebias_marmoratus
ENSCING00000019824	-	86	42.537	ENSKMAG00000012434	yaf2	72	42.537	Kryptolebias_marmoratus
ENSCING00000019824	-	97	41.509	ENSLBEG00000007500	YAF2	86	41.509	Labrus_bergylta
ENSCING00000019824	-	86	46.715	ENSLBEG00000004295	yaf2	71	46.715	Labrus_bergylta
ENSCING00000019824	-	88	44.118	ENSLACG00000006137	YAF2	76	44.118	Latimeria_chalumnae
ENSCING00000019824	-	88	41.727	ENSLOCG00000001370	yaf2	76	44.604	Lepisosteus_oculatus
ENSCING00000019824	-	86	43.796	ENSMFAG00000035590	YAF2	97	48.611	Macaca_fascicularis
ENSCING00000019824	-	86	43.796	ENSMNEG00000029487	YAF2	97	48.611	Macaca_nemestrina
ENSCING00000019824	-	74	48.739	ENSMLEG00000035641	YAF2	69	48.361	Mandrillus_leucophaeus
ENSCING00000019824	-	86	43.382	ENSMAMG00000009022	yaf2	72	43.382	Mastacembelus_armatus
ENSCING00000019824	-	86	45.652	ENSMAMG00000023179	YAF2	73	47.101	Mastacembelus_armatus
ENSCING00000019824	-	86	41.176	ENSMZEG00005010902	yaf2	72	43.382	Maylandia_zebra
ENSCING00000019824	-	86	46.377	ENSMZEG00005008258	YAF2	73	46.377	Maylandia_zebra
ENSCING00000019824	-	80	47.727	ENSMAUG00000009658	Yaf2	86	45.806	Mesocricetus_auratus
ENSCING00000019824	-	86	43.066	ENSMICG00000006755	YAF2	98	54.545	Microcebus_murinus
ENSCING00000019824	-	82	46.970	ENSMOCG00000020557	Yaf2	75	46.715	Microtus_ochrogaster
ENSCING00000019824	-	86	46.715	ENSMMOG00000014622	YAF2	83	46.715	Mola_mola
ENSCING00000019824	-	86	46.715	ENSMMOG00000002397	yaf2	72	46.715	Mola_mola
ENSCING00000019824	-	86	42.105	ENSMODG00000008906	YAF2	76	43.571	Monodelphis_domestica
ENSCING00000019824	-	86	44.118	ENSMALG00000012339	YAF2	73	47.826	Monopterus_albus
ENSCING00000019824	-	86	32.571	ENSMALG00000008839	rybpb	77	33.889	Monopterus_albus
ENSCING00000019824	-	86	44.118	ENSMALG00000016925	yaf2	72	44.118	Monopterus_albus
ENSCING00000019824	-	84	46.667	MGP_CAROLIEiJ_G0020190	Yaf2	86	44.937	Mus_caroli
ENSCING00000019824	-	84	46.667	ENSMUSG00000022634	Yaf2	75	58.824	Mus_musculus
ENSCING00000019824	-	84	46.667	MGP_PahariEiJ_G0020194	Yaf2	76	46.429	Mus_pahari
ENSCING00000019824	-	84	46.667	MGP_SPRETEiJ_G0021086	Yaf2	86	44.937	Mus_spretus
ENSCING00000019824	-	74	48.696	ENSNGAG00000017255	Yaf2	69	47.541	Nannospalax_galili
ENSCING00000019824	-	86	46.377	ENSNBRG00000020680	YAF2	77	64.286	Neolamprologus_brichardi
ENSCING00000019824	-	86	41.176	ENSNBRG00000001404	yaf2	72	43.382	Neolamprologus_brichardi
ENSCING00000019824	-	86	43.066	ENSNLEG00000017946	YAF2	76	43.571	Nomascus_leucogenys
ENSCING00000019824	-	88	39.855	ENSMEUG00000012378	YAF2	79	39.855	Notamacropus_eugenii
ENSCING00000019824	-	86	32.370	ENSONIG00000016842	yaf2	76	34.104	Oreochromis_niloticus
ENSCING00000019824	-	76	45.902	ENSOCUG00000007321	YAF2	69	45.902	Oryctolagus_cuniculus
ENSCING00000019824	-	86	47.101	ENSORLG00000003255	YAF2	73	47.101	Oryzias_latipes
ENSCING00000019824	-	86	43.382	ENSORLG00000023863	yaf2	76	54.386	Oryzias_latipes
ENSCING00000019824	-	86	47.101	ENSORLG00020017893	YAF2	73	47.101	Oryzias_latipes_hni
ENSCING00000019824	-	86	43.382	ENSORLG00020019706	yaf2	76	54.386	Oryzias_latipes_hni
ENSCING00000019824	-	86	43.382	ENSORLG00015018018	yaf2	84	40.506	Oryzias_latipes_hsok
ENSCING00000019824	-	86	47.101	ENSORLG00015011159	YAF2	73	47.101	Oryzias_latipes_hsok
ENSCING00000019824	-	86	48.175	ENSOMEG00000010094	YAF2	73	48.175	Oryzias_melastigma
ENSCING00000019824	-	86	43.382	ENSOMEG00000000289	yaf2	81	41.830	Oryzias_melastigma
ENSCING00000019824	-	86	43.066	ENSPPAG00000033805	YAF2	98	54.545	Pan_paniscus
ENSCING00000019824	-	86	43.066	ENSPPRG00000009233	YAF2	76	43.571	Panthera_pardus
ENSCING00000019824	-	86	43.066	ENSPTRG00000004837	YAF2	98	54.545	Pan_troglodytes
ENSCING00000019824	-	86	43.796	ENSPANG00000012257	YAF2	97	48.611	Papio_anubis
ENSCING00000019824	-	86	36.364	ENSPKIG00000021549	rybpb	74	40.260	Paramormyrops_kingsleyae
ENSCING00000019824	-	97	43.791	ENSPKIG00000022643	YAF2	76	45.926	Paramormyrops_kingsleyae
ENSCING00000019824	-	86	44.118	ENSPKIG00000021482	yaf2	74	44.118	Paramormyrops_kingsleyae
ENSCING00000019824	-	80	45.926	ENSPMGG00000010767	YAF2	86	66.667	Periophthalmus_magnuspinnatus
ENSCING00000019824	-	74	48.739	ENSPEMG00000000787	Yaf2	70	48.387	Peromyscus_maniculatus_bairdii
ENSCING00000019824	-	86	42.647	ENSPFOG00000015547	yaf2	72	42.647	Poecilia_formosa
ENSCING00000019824	-	86	47.101	ENSPLAG00000010160	YAF2	74	47.101	Poecilia_latipinna
ENSCING00000019824	-	86	42.647	ENSPLAG00000004691	yaf2	72	42.647	Poecilia_latipinna
ENSCING00000019824	-	86	42.647	ENSPMEG00000005533	yaf2	72	42.647	Poecilia_mexicana
ENSCING00000019824	-	84	47.059	ENSPMEG00000013605	YAF2	74	47.101	Poecilia_mexicana
ENSCING00000019824	-	86	47.445	ENSPREG00000009617	YAF2	73	47.445	Poecilia_reticulata
ENSCING00000019824	-	86	42.647	ENSPREG00000011388	yaf2	72	42.647	Poecilia_reticulata
ENSCING00000019824	-	86	43.796	ENSPCOG00000021954	YAF2	78	55.769	Propithecus_coquereli
ENSCING00000019824	-	86	43.066	ENSPVAG00000016833	YAF2	76	43.571	Pteropus_vampyrus
ENSCING00000019824	-	86	46.377	ENSPNYG00000005107	YAF2	73	46.377	Pundamilia_nyererei
ENSCING00000019824	-	86	41.176	ENSPNYG00000008329	yaf2	72	43.382	Pundamilia_nyererei
ENSCING00000019824	-	86	48.551	ENSPNAG00000005797	yaf2	73	48.551	Pygocentrus_nattereri
ENSCING00000019824	-	86	35.838	ENSPNAG00000026904	rybpb	77	36.416	Pygocentrus_nattereri
ENSCING00000019824	-	88	42.143	ENSPNAG00000018088	YAF2	74	42.143	Pygocentrus_nattereri
ENSCING00000019824	-	86	47.761	ENSRNOG00000004773	Yaf2	75	48.936	Rattus_norvegicus
ENSCING00000019824	-	86	45.255	ENSRBIG00000028301	YAF2	56	75.000	Rhinopithecus_bieti
ENSCING00000019824	-	74	40.559	ENSRROG00000042850	YAF2	71	40.411	Rhinopithecus_roxellana
ENSCING00000019824	-	74	47.899	ENSSBOG00000012699	YAF2	70	48.361	Saimiri_boliviensis_boliviensis
ENSCING00000019824	-	88	41.912	ENSSHAG00000007145	YAF2	76	43.571	Sarcophilus_harrisii
ENSCING00000019824	-	86	44.118	ENSSFOG00015005138	yaf2	74	44.118	Scleropages_formosus
ENSCING00000019824	-	89	46.259	ENSSFOG00015005147	YAF2	76	46.259	Scleropages_formosus
ENSCING00000019824	-	86	43.382	ENSSMAG00000020472	yaf2	72	43.382	Scophthalmus_maximus
ENSCING00000019824	-	86	43.151	ENSSDUG00000022939	YAF2	73	47.101	Seriola_dumerili
ENSCING00000019824	-	86	43.382	ENSSDUG00000007160	yaf2	72	43.382	Seriola_dumerili
ENSCING00000019824	-	86	43.382	ENSSLDG00000012171	yaf2	72	43.382	Seriola_lalandi_dorsalis
ENSCING00000019824	-	86	43.151	ENSSLDG00000022945	YAF2	98	64.815	Seriola_lalandi_dorsalis
ENSCING00000019824	-	86	43.066	ENSSPUG00000009968	YAF2	76	43.571	Sphenodon_punctatus
ENSCING00000019824	-	85	48.936	ENSSPAG00000003132	YAF2	68	48.936	Stegastes_partitus
ENSCING00000019824	-	86	43.382	ENSSPAG00000013452	yaf2	72	43.382	Stegastes_partitus
ENSCING00000019824	-	86	44.361	ENSSSCG00000031775	YAF2	76	45.714	Sus_scrofa
ENSCING00000019824	-	86	39.007	ENSSSCG00000025053	RYBP	72	44.521	Sus_scrofa
ENSCING00000019824	-	86	41.353	ENSTGUG00000005817	YAF2	76	43.571	Taeniopygia_guttata
ENSCING00000019824	-	86	50.000	ENSTRUG00000016786	YAF2	97	47.170	Takifugu_rubripes
ENSCING00000019824	-	86	46.715	ENSTRUG00000016767	yaf2	72	46.715	Takifugu_rubripes
ENSCING00000019824	-	86	46.715	ENSTNIG00000018505	yaf2	72	46.715	Tetraodon_nigroviridis
ENSCING00000019824	-	74	47.899	ENSTTRG00000001376	YAF2	69	48.361	Tursiops_truncatus
ENSCING00000019824	-	74	47.899	ENSUAMG00000016872	YAF2	64	75.676	Ursus_americanus
ENSCING00000019824	-	80	47.692	ENSVPAG00000012039	YAF2	74	48.462	Vicugna_pacos
ENSCING00000019824	-	97	41.772	ENSXETG00000006795	yaf2	86	41.772	Xenopus_tropicalis
ENSCING00000019824	-	86	37.736	ENSXCOG00000009651	rybpb	76	38.365	Xiphophorus_couchianus
ENSCING00000019824	-	84	47.692	ENSXCOG00000020837	YAF2	77	45.455	Xiphophorus_couchianus
ENSCING00000019824	-	86	42.647	ENSXMAG00000009358	yaf2	72	42.647	Xiphophorus_maculatus
ENSCING00000019824	-	86	47.482	ENSXMAG00000025433	YAF2	74	47.482	Xiphophorus_maculatus