EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000019877 (Gene tree)
Gene ID: 445634
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 3089 bases
Position: chr3:4998536-5001624
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000035696	MMR_HSR1	PF01926.23	5.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000036515	-	1274	-	ENSCINP00000035696	198 (aa)	-	H2Y1B2

Gene Model

Click here to download ENSCING00000019877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000019877's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000019877	-	91	91.713	ENSG00000129472	RAB2B	100	93.548	Homo_sapiens
ENSCING00000019877	-	91	97.238	ENSG00000104388	RAB2A	94	90.816	Homo_sapiens
ENSCING00000019877	-	91	97.238	ENSAPOG00000009138	rab2a	85	97.238	Acanthochromis_polyacanthus
ENSCING00000019877	-	91	91.713	ENSAMEG00000006285	RAB2B	84	91.713	Ailuropoda_melanoleuca
ENSCING00000019877	-	91	97.238	ENSAOCG00000014658	rab2a	85	97.238	Amphiprion_ocellaris
ENSCING00000019877	-	91	97.238	ENSAPEG00000010294	rab2a	85	97.238	Amphiprion_percula
ENSCING00000019877	-	91	97.238	ENSATEG00000002553	rab2a	91	97.238	Anabas_testudineus
ENSCING00000019877	-	91	77.348	ENSACAG00000003034	RAB2B	87	77.348	Anolis_carolinensis
ENSCING00000019877	-	91	97.238	ENSACAG00000005694	RAB2A	85	97.238	Anolis_carolinensis
ENSCING00000019877	-	91	91.713	ENSANAG00000018900	RAB2B	84	91.713	Aotus_nancymaae
ENSCING00000019877	-	91	97.238	ENSANAG00000035405	RAB2A	85	97.238	Aotus_nancymaae
ENSCING00000019877	-	91	97.238	ENSAMXG00000036772	rab2a	85	97.238	Astyanax_mexicanus
ENSCING00000019877	-	91	91.713	ENSBTAG00000044207	RAB2B	84	91.713	Bos_taurus
ENSCING00000019877	-	80	96.855	ENSBTAG00000000948	RAB2A	84	96.855	Bos_taurus
ENSCING00000019877	-	91	95.580	WBGene00006833	unc-108	85	95.580	Caenorhabditis_elegans
ENSCING00000019877	-	91	91.713	ENSCJAG00000008981	RAB2B	84	91.713	Callithrix_jacchus
ENSCING00000019877	-	91	91.713	ENSCAFG00000005641	RAB2B	84	91.713	Canis_familiaris
ENSCING00000019877	-	91	97.238	ENSCAFG00000007153	RAB2A	78	97.238	Canis_familiaris
ENSCING00000019877	-	87	97.110	ENSCAFG00020021797	-	79	97.110	Canis_lupus_dingo
ENSCING00000019877	-	91	91.713	ENSCHIG00000017531	-	87	91.713	Capra_hircus
ENSCING00000019877	-	91	97.238	ENSCHIG00000020374	RAB2A	85	97.238	Capra_hircus
ENSCING00000019877	-	91	91.713	ENSTSYG00000033832	RAB2B	84	91.713	Carlito_syrichta
ENSCING00000019877	-	91	97.238	ENSTSYG00000030301	RAB2A	85	97.238	Carlito_syrichta
ENSCING00000019877	-	91	91.713	ENSCPOG00000026575	RAB2B	84	91.713	Cavia_porcellus
ENSCING00000019877	-	91	97.238	ENSCCAG00000025945	RAB2A	85	97.238	Cebus_capucinus
ENSCING00000019877	-	91	72.928	ENSCCAG00000028745	RAB2B	80	72.928	Cebus_capucinus
ENSCING00000019877	-	91	97.238	ENSCATG00000028334	RAB2A	85	97.238	Cercocebus_atys
ENSCING00000019877	-	91	91.713	ENSCATG00000044849	RAB2B	84	91.713	Cercocebus_atys
ENSCING00000019877	-	91	91.160	ENSCLAG00000002400	RAB2B	84	91.160	Chinchilla_lanigera
ENSCING00000019877	-	91	97.238	ENSCLAG00000005708	RAB2A	85	97.238	Chinchilla_lanigera
ENSCING00000019877	-	91	97.238	ENSCSAG00000014359	RAB2A	85	97.238	Chlorocebus_sabaeus
ENSCING00000019877	-	91	91.713	ENSCSAG00000016480	RAB2B	84	91.713	Chlorocebus_sabaeus
ENSCING00000019877	-	92	89.617	ENSCHOG00000000710	RAB2B	92	89.617	Choloepus_hoffmanni
ENSCING00000019877	-	91	90.608	ENSCPBG00000012691	RAB2B	84	90.608	Chrysemys_picta_bellii
ENSCING00000019877	-	91	97.238	ENSCPBG00000023254	RAB2A	85	97.238	Chrysemys_picta_bellii
ENSCING00000019877	-	91	100.000	ENSCSAVG00000002088	-	85	100.000	Ciona_savignyi
ENSCING00000019877	-	91	91.713	ENSCANG00000029206	RAB2B	87	91.713	Colobus_angolensis_palliatus
ENSCING00000019877	-	91	97.238	ENSCGRG00001020076	Rab2a	85	97.238	Cricetulus_griseus_chok1gshd
ENSCING00000019877	-	91	91.713	ENSCGRG00001020833	-	84	91.713	Cricetulus_griseus_chok1gshd
ENSCING00000019877	-	91	91.713	ENSCGRG00000010264	-	84	91.713	Cricetulus_griseus_crigri
ENSCING00000019877	-	91	97.238	ENSCSEG00000017211	rab2a	85	97.238	Cynoglossus_semilaevis
ENSCING00000019877	-	91	96.685	ENSCVAG00000017623	rab2a	85	96.685	Cyprinodon_variegatus
ENSCING00000019877	-	91	97.238	ENSDARG00000020261	rab2a	85	97.238	Danio_rerio
ENSCING00000019877	-	91	97.238	ENSDORG00000025014	Rab2a	85	97.238	Dipodomys_ordii
ENSCING00000019877	-	91	91.713	ENSDORG00000012048	Rab2b	84	91.713	Dipodomys_ordii
ENSCING00000019877	-	91	95.580	FBgn0014009	Rab2	85	95.580	Drosophila_melanogaster
ENSCING00000019877	-	91	97.238	ENSETEG00000010340	RAB2A	85	97.238	Echinops_telfairi
ENSCING00000019877	-	91	97.238	ENSEASG00005016261	RAB2A	85	97.238	Equus_asinus_asinus
ENSCING00000019877	-	80	93.711	ENSEASG00005011485	RAB2B	82	93.711	Equus_asinus_asinus
ENSCING00000019877	-	91	91.713	ENSECAG00000006219	RAB2B	84	91.713	Equus_caballus
ENSCING00000019877	-	91	97.238	ENSECAG00000012124	RAB2A	85	97.238	Equus_caballus
ENSCING00000019877	-	91	97.238	ENSELUG00000023964	rab2a	85	97.238	Esox_lucius
ENSCING00000019877	-	91	97.238	ENSFCAG00000024352	RAB2A	85	97.238	Felis_catus
ENSCING00000019877	-	91	91.713	ENSFCAG00000007745	RAB2B	84	91.713	Felis_catus
ENSCING00000019877	-	91	97.238	ENSFALG00000005613	RAB2A	85	97.238	Ficedula_albicollis
ENSCING00000019877	-	91	91.713	ENSFDAG00000017456	RAB2B	84	91.713	Fukomys_damarensis
ENSCING00000019877	-	91	97.238	ENSFHEG00000001296	rab2a	85	97.238	Fundulus_heteroclitus
ENSCING00000019877	-	91	97.238	ENSGALG00000015450	RAB2A	91	97.238	Gallus_gallus
ENSCING00000019877	-	91	96.685	ENSGAFG00000006846	rab2a	85	96.685	Gambusia_affinis
ENSCING00000019877	-	99	90.955	ENSGACG00000014905	rab2a	91	90.955	Gasterosteus_aculeatus
ENSCING00000019877	-	91	96.685	ENSGAGG00000005606	RAB2A	85	96.685	Gopherus_agassizii
ENSCING00000019877	-	91	91.160	ENSGAGG00000023041	RAB2B	84	91.160	Gopherus_agassizii
ENSCING00000019877	-	91	91.713	ENSGGOG00000014650	RAB2B	87	91.713	Gorilla_gorilla
ENSCING00000019877	-	91	97.238	ENSGGOG00000043049	RAB2A	85	97.238	Gorilla_gorilla
ENSCING00000019877	-	91	97.238	ENSHBUG00000019164	rab2a	85	97.238	Haplochromis_burtoni
ENSCING00000019877	-	91	91.713	ENSHGLG00000004071	RAB2B	84	91.713	Heterocephalus_glaber_female
ENSCING00000019877	-	91	97.238	ENSHGLG00000019399	RAB2A	85	97.238	Heterocephalus_glaber_female
ENSCING00000019877	-	91	97.238	ENSHGLG00100015803	RAB2A	85	97.238	Heterocephalus_glaber_male
ENSCING00000019877	-	91	97.238	ENSHCOG00000014428	rab2a	85	97.238	Hippocampus_comes
ENSCING00000019877	-	91	97.238	ENSIPUG00000007539	rab2a	85	97.238	Ictalurus_punctatus
ENSCING00000019877	-	91	91.713	ENSSTOG00000001886	RAB2B	84	91.713	Ictidomys_tridecemlineatus
ENSCING00000019877	-	91	97.238	ENSJJAG00000000676	Rab2a	85	97.238	Jaculus_jaculus
ENSCING00000019877	-	91	97.238	ENSKMAG00000009799	rab2a	85	97.238	Kryptolebias_marmoratus
ENSCING00000019877	-	91	97.238	ENSLBEG00000020796	rab2a	85	97.238	Labrus_bergylta
ENSCING00000019877	-	81	93.125	ENSLACG00000014446	RAB2B	97	93.125	Latimeria_chalumnae
ENSCING00000019877	-	91	97.238	ENSLACG00000012521	RAB2A	85	97.238	Latimeria_chalumnae
ENSCING00000019877	-	91	97.238	ENSLOCG00000005108	rab2a	85	97.238	Lepisosteus_oculatus
ENSCING00000019877	-	91	97.238	ENSLAFG00000015567	RAB2A	85	97.238	Loxodonta_africana
ENSCING00000019877	-	91	91.713	ENSMFAG00000027114	RAB2B	84	91.713	Macaca_fascicularis
ENSCING00000019877	-	91	97.238	ENSMFAG00000037805	RAB2A	85	97.238	Macaca_fascicularis
ENSCING00000019877	-	91	91.713	ENSMMUG00000014992	RAB2B	87	91.713	Macaca_mulatta
ENSCING00000019877	-	95	93.651	ENSMMUG00000017038	RAB2A	96	96.226	Macaca_mulatta
ENSCING00000019877	-	91	91.713	ENSMNEG00000032275	RAB2B	84	91.713	Macaca_nemestrina
ENSCING00000019877	-	91	97.238	ENSMNEG00000037175	RAB2A	85	97.238	Macaca_nemestrina
ENSCING00000019877	-	91	91.713	ENSMLEG00000043065	RAB2B	84	91.713	Mandrillus_leucophaeus
ENSCING00000019877	-	91	97.238	ENSMAMG00000011549	rab2a	85	97.238	Mastacembelus_armatus
ENSCING00000019877	-	91	97.238	ENSMZEG00005010611	rab2a	85	97.238	Maylandia_zebra
ENSCING00000019877	-	91	97.238	ENSMAUG00000017792	Rab2a	85	97.238	Mesocricetus_auratus
ENSCING00000019877	-	91	97.238	ENSMICG00000034540	RAB2A	85	97.238	Microcebus_murinus
ENSCING00000019877	-	91	97.238	ENSMOCG00000014140	Rab2a	85	97.238	Microtus_ochrogaster
ENSCING00000019877	-	91	91.713	ENSMOCG00000013161	Rab2b	84	91.713	Microtus_ochrogaster
ENSCING00000019877	-	91	92.265	ENSMODG00000006121	RAB2B	84	92.265	Monodelphis_domestica
ENSCING00000019877	-	91	97.238	ENSMODG00000008556	RAB2A	85	97.238	Monodelphis_domestica
ENSCING00000019877	-	99	90.594	ENSMALG00000004342	rab2a	85	97.238	Monopterus_albus
ENSCING00000019877	-	91	91.160	MGP_CAROLIEiJ_G0019238	Rab2b	82	93.711	Mus_caroli
ENSCING00000019877	-	91	97.238	MGP_CAROLIEiJ_G0025796	Rab2a	85	97.238	Mus_caroli
ENSCING00000019877	-	91	91.160	ENSMUSG00000022159	Rab2b	82	93.711	Mus_musculus
ENSCING00000019877	-	91	97.238	ENSMUSG00000047187	Rab2a	85	97.238	Mus_musculus
ENSCING00000019877	-	91	97.238	MGP_PahariEiJ_G0023919	Rab2a	85	97.238	Mus_pahari
ENSCING00000019877	-	99	83.663	MGP_PahariEiJ_G0030259	Rab2b	94	83.663	Mus_pahari
ENSCING00000019877	-	91	91.160	MGP_SPRETEiJ_G0020130	Rab2b	82	93.711	Mus_spretus
ENSCING00000019877	-	91	97.238	MGP_SPRETEiJ_G0026744	Rab2a	85	97.238	Mus_spretus
ENSCING00000019877	-	91	91.209	ENSMPUG00000000177	RAB2B	82	91.209	Mustela_putorius_furo
ENSCING00000019877	-	91	91.713	ENSMLUG00000001902	RAB2B	84	91.713	Myotis_lucifugus
ENSCING00000019877	-	91	97.238	ENSMLUG00000002855	RAB2A	85	97.238	Myotis_lucifugus
ENSCING00000019877	-	91	92.265	ENSNGAG00000017091	Rab2b	84	92.265	Nannospalax_galili
ENSCING00000019877	-	91	97.238	ENSNGAG00000020764	Rab2a	85	97.238	Nannospalax_galili
ENSCING00000019877	-	91	97.238	ENSNBRG00000001241	rab2a	85	97.238	Neolamprologus_brichardi
ENSCING00000019877	-	91	91.713	ENSNLEG00000014534	RAB2B	87	91.713	Nomascus_leucogenys
ENSCING00000019877	-	91	97.238	ENSNLEG00000036148	RAB2A	85	97.238	Nomascus_leucogenys
ENSCING00000019877	-	91	92.265	ENSMEUG00000010489	RAB2B	84	92.265	Notamacropus_eugenii
ENSCING00000019877	-	91	91.713	ENSOPRG00000016163	RAB2B	84	91.713	Ochotona_princeps
ENSCING00000019877	-	91	91.713	ENSODEG00000016788	-	91	91.713	Octodon_degus
ENSCING00000019877	-	91	91.160	ENSODEG00000001343	RAB2B	84	91.160	Octodon_degus
ENSCING00000019877	-	91	97.238	ENSODEG00000002369	-	85	97.238	Octodon_degus
ENSCING00000019877	-	91	97.238	ENSONIG00000016622	rab2a	85	97.238	Oreochromis_niloticus
ENSCING00000019877	-	91	97.238	ENSOANG00000005041	RAB2A	85	97.238	Ornithorhynchus_anatinus
ENSCING00000019877	-	91	91.713	ENSOCUG00000000331	RAB2B	84	91.713	Oryctolagus_cuniculus
ENSCING00000019877	-	91	97.238	ENSORLG00000013432	rab2a	85	97.238	Oryzias_latipes
ENSCING00000019877	-	91	97.238	ENSORLG00020020035	rab2a	85	97.238	Oryzias_latipes_hni
ENSCING00000019877	-	91	97.238	ENSORLG00015020900	rab2a	85	97.238	Oryzias_latipes_hsok
ENSCING00000019877	-	91	97.238	ENSOMEG00000016752	rab2a	85	97.238	Oryzias_melastigma
ENSCING00000019877	-	91	91.713	ENSOGAG00000002728	-	84	91.713	Otolemur_garnettii
ENSCING00000019877	-	91	91.713	ENSOARG00000019625	RAB2B	82	91.713	Ovis_aries
ENSCING00000019877	-	91	91.713	ENSPPAG00000035840	RAB2B	84	91.713	Pan_paniscus
ENSCING00000019877	-	91	97.238	ENSPPRG00000012945	RAB2A	85	97.238	Panthera_pardus
ENSCING00000019877	-	91	91.713	ENSPPRG00000005831	RAB2B	84	91.713	Panthera_pardus
ENSCING00000019877	-	91	91.713	ENSPTIG00000021935	RAB2B	84	91.713	Panthera_tigris_altaica
ENSCING00000019877	-	91	91.713	ENSPTRG00000006125	-	100	91.713	Pan_troglodytes
ENSCING00000019877	-	91	97.238	ENSPTRG00000020284	RAB2A	85	97.238	Pan_troglodytes
ENSCING00000019877	-	91	91.713	ENSPANG00000021789	RAB2B	84	91.713	Papio_anubis
ENSCING00000019877	-	91	97.238	ENSPANG00000021867	RAB2A	85	97.238	Papio_anubis
ENSCING00000019877	-	91	96.685	ENSPKIG00000005764	RAB2A	85	96.685	Paramormyrops_kingsleyae
ENSCING00000019877	-	91	96.685	ENSPKIG00000009739	rab2a	85	96.685	Paramormyrops_kingsleyae
ENSCING00000019877	-	91	96.685	ENSPSIG00000011994	RAB2A	85	96.685	Pelodiscus_sinensis
ENSCING00000019877	-	91	96.133	ENSPMAG00000006171	-	85	96.133	Petromyzon_marinus
ENSCING00000019877	-	90	93.855	ENSPMAG00000008764	RAB2B	97	93.855	Petromyzon_marinus
ENSCING00000019877	-	91	89.796	ENSPCIG00000000024	-	84	89.796	Phascolarctos_cinereus
ENSCING00000019877	-	91	92.265	ENSPCIG00000021943	RAB2B	88	92.265	Phascolarctos_cinereus
ENSCING00000019877	-	91	97.238	ENSPFOG00000004786	rab2a	85	97.238	Poecilia_formosa
ENSCING00000019877	-	91	97.238	ENSPLAG00000023374	rab2a	85	97.238	Poecilia_latipinna
ENSCING00000019877	-	91	97.238	ENSPREG00000014888	rab2a	85	97.238	Poecilia_reticulata
ENSCING00000019877	-	91	97.238	ENSPPYG00000018617	RAB2A	85	97.238	Pongo_abelii
ENSCING00000019877	-	91	90.608	ENSPPYG00000005597	RAB2B	84	90.608	Pongo_abelii
ENSCING00000019877	-	91	97.238	ENSPCOG00000020717	RAB2A	85	97.238	Propithecus_coquereli
ENSCING00000019877	-	91	91.713	ENSPVAG00000000273	RAB2B	84	91.713	Pteropus_vampyrus
ENSCING00000019877	-	91	97.238	ENSPNYG00000012426	rab2a	85	97.238	Pundamilia_nyererei
ENSCING00000019877	-	91	97.238	ENSPNAG00000011193	rab2a	85	97.238	Pygocentrus_nattereri
ENSCING00000019877	-	99	82.927	ENSRNOG00000012488	Rab2b	93	82.927	Rattus_norvegicus
ENSCING00000019877	-	88	97.714	ENSRNOG00000005963	Rab2a	85	97.714	Rattus_norvegicus
ENSCING00000019877	-	91	91.713	ENSRBIG00000027517	RAB2B	87	91.713	Rhinopithecus_bieti
ENSCING00000019877	-	91	97.238	ENSRBIG00000037603	RAB2A	86	97.238	Rhinopithecus_bieti
ENSCING00000019877	-	91	97.238	ENSRROG00000031181	RAB2A	85	97.238	Rhinopithecus_roxellana
ENSCING00000019877	-	91	91.713	ENSRROG00000039326	RAB2B	87	91.713	Rhinopithecus_roxellana
ENSCING00000019877	-	91	97.238	ENSSBOG00000025313	RAB2A	85	97.238	Saimiri_boliviensis_boliviensis
ENSCING00000019877	-	91	72.928	ENSSBOG00000034839	RAB2B	80	72.928	Saimiri_boliviensis_boliviensis
ENSCING00000019877	-	91	88.950	ENSSHAG00000013149	-	85	88.950	Sarcophilus_harrisii
ENSCING00000019877	-	91	97.238	ENSSFOG00015015034	rab2a	85	97.238	Scleropages_formosus
ENSCING00000019877	-	91	96.685	ENSSFOG00015000865	-	85	96.685	Scleropages_formosus
ENSCING00000019877	-	91	97.238	ENSSMAG00000001002	rab2a	85	97.238	Scophthalmus_maximus
ENSCING00000019877	-	91	97.238	ENSSDUG00000013724	rab2a	85	97.238	Seriola_dumerili
ENSCING00000019877	-	91	97.238	ENSSLDG00000022555	rab2a	85	97.238	Seriola_lalandi_dorsalis
ENSCING00000019877	-	91	92.265	ENSSPUG00000010112	RAB2B	83	92.265	Sphenodon_punctatus
ENSCING00000019877	-	91	91.713	ENSSSCG00000029544	RAB2B	84	91.713	Sus_scrofa
ENSCING00000019877	-	91	97.238	ENSSSCG00000006232	RAB2A	85	97.238	Sus_scrofa
ENSCING00000019877	-	91	97.238	ENSTGUG00000011182	RAB2A	85	97.238	Taeniopygia_guttata
ENSCING00000019877	-	91	97.238	ENSTRUG00000003363	rab2a	85	97.238	Takifugu_rubripes
ENSCING00000019877	-	91	95.055	ENSTNIG00000003472	rab2a	85	95.055	Tetraodon_nigroviridis
ENSCING00000019877	-	91	91.713	ENSUMAG00000004940	RAB2B	84	91.713	Ursus_maritimus
ENSCING00000019877	-	91	90.055	ENSVPAG00000007360	RAB2B	85	90.055	Vicugna_pacos
ENSCING00000019877	-	91	97.238	ENSVVUG00000018053	-	85	97.238	Vulpes_vulpes
ENSCING00000019877	-	91	94.475	ENSVVUG00000011426	-	86	94.475	Vulpes_vulpes
ENSCING00000019877	-	91	91.160	ENSXETG00000017184	rab2b	84	91.160	Xenopus_tropicalis
ENSCING00000019877	-	91	97.238	ENSXMAG00000024267	rab2a	85	97.238	Xiphophorus_maculatus