EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000019896 (Gene tree)
Gene ID: 100185381
Gene Symbol: -
Alias: -
Full Name: 39S ribosomal protein L54%2C mitochondrial
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2268 bases
Position: chr10:628943-631210
Accession: 100185381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000033515	Ribosomal_L37	PF08561.10	4.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031127	-	964	-	ENSCINP00000033515	142 (aa)	XP_002125406	H2XV31

Gene Model

Click here to download ENSCING00000019896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000019896's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000019896	-	75	39.252	ENSG00000183617	MRPL54	78	39.252	Homo_sapiens
ENSCING00000019896	-	82	31.624	ENSAPOG00000022643	mrpl54	85	31.624	Acanthochromis_polyacanthus
ENSCING00000019896	-	56	43.750	ENSAMEG00000005908	MRPL54	70	40.625	Ailuropoda_melanoleuca
ENSCING00000019896	-	54	40.260	ENSACIG00000006438	mrpl54	83	34.211	Amphilophus_citrinellus
ENSCING00000019896	-	56	40.000	ENSAOCG00000006430	mrpl54	85	36.134	Amphiprion_ocellaris
ENSCING00000019896	-	56	40.000	ENSAPEG00000023406	mrpl54	85	36.134	Amphiprion_percula
ENSCING00000019896	-	56	36.250	ENSATEG00000004969	mrpl54	85	34.454	Anabas_testudineus
ENSCING00000019896	-	73	43.689	ENSACAG00000017747	-	95	43.689	Anolis_carolinensis
ENSCING00000019896	-	67	36.842	ENSANAG00000028692	MRPL54	69	36.842	Aotus_nancymaae
ENSCING00000019896	-	54	37.662	ENSACLG00000001877	mrpl54	83	32.456	Astatotilapia_calliptera
ENSCING00000019896	-	56	37.500	ENSAMXG00000018143	mrpl54	71	34.000	Astyanax_mexicanus
ENSCING00000019896	-	56	43.750	ENSBTAG00000008396	MRPL54	70	39.583	Bos_taurus
ENSCING00000019896	-	50	36.000	WBGene00009128	mrpl-54	87	31.624	Caenorhabditis_elegans
ENSCING00000019896	-	67	35.789	ENSCJAG00000014998	MRPL54	69	35.789	Callithrix_jacchus
ENSCING00000019896	-	53	42.667	ENSCAFG00000019192	MRPL54	70	38.542	Canis_familiaris
ENSCING00000019896	-	53	42.667	ENSCAFG00020018333	MRPL54	70	38.542	Canis_lupus_dingo
ENSCING00000019896	-	56	43.750	ENSCHIG00000026538	MRPL54	70	39.583	Capra_hircus
ENSCING00000019896	-	68	42.708	ENSCAPG00000012166	MRPL54	98	42.708	Cavia_aperea
ENSCING00000019896	-	74	41.509	ENSCPOG00000031082	MRPL54	77	41.509	Cavia_porcellus
ENSCING00000019896	-	67	35.789	ENSCCAG00000000138	MRPL54	69	35.789	Cebus_capucinus
ENSCING00000019896	-	71	40.196	ENSCATG00000014066	MRPL54	74	40.196	Cercocebus_atys
ENSCING00000019896	-	74	41.667	ENSCLAG00000007908	MRPL54	76	41.667	Chinchilla_lanigera
ENSCING00000019896	-	71	40.196	ENSCSAG00000010950	MRPL54	74	40.196	Chlorocebus_sabaeus
ENSCING00000019896	-	100	74.306	ENSCSAVG00000009604	-	99	74.306	Ciona_savignyi
ENSCING00000019896	-	71	41.176	ENSCANG00000027841	MRPL54	74	41.176	Colobus_angolensis_palliatus
ENSCING00000019896	-	71	39.216	ENSCGRG00001019482	Mrpl54	74	39.216	Cricetulus_griseus_chok1gshd
ENSCING00000019896	-	71	39.216	ENSCGRG00000010923	Mrpl54	74	39.216	Cricetulus_griseus_crigri
ENSCING00000019896	-	56	37.500	ENSCSEG00000019883	mrpl54	69	34.906	Cynoglossus_semilaevis
ENSCING00000019896	-	80	36.842	ENSCVAG00000002210	mrpl54	81	36.842	Cyprinodon_variegatus
ENSCING00000019896	-	80	34.513	ENSDARG00000071468	mrpl54	82	34.513	Danio_rerio
ENSCING00000019896	-	56	40.000	ENSDNOG00000007387	MRPL54	77	38.095	Dasypus_novemcinctus
ENSCING00000019896	-	56	43.750	ENSDORG00000005326	Mrpl54	74	39.796	Dipodomys_ordii
ENSCING00000019896	-	53	37.333	FBgn0034579	mRpL54	57	37.333	Drosophila_melanogaster
ENSCING00000019896	-	82	40.678	ENSETEG00000017500	MRPL54	88	40.678	Echinops_telfairi
ENSCING00000019896	-	51	43.056	ENSEBUG00000003179	mrpl54	62	43.056	Eptatretus_burgeri
ENSCING00000019896	-	56	40.000	ENSEASG00005022283	MRPL54	77	38.679	Equus_asinus_asinus
ENSCING00000019896	-	56	41.250	ENSECAG00000001515	MRPL54	77	39.623	Equus_caballus
ENSCING00000019896	-	54	38.961	ENSELUG00000022358	mrpl54	70	37.113	Esox_lucius
ENSCING00000019896	-	56	43.750	ENSFCAG00000007144	MRPL54	70	39.583	Felis_catus
ENSCING00000019896	-	67	43.750	ENSFALG00000011660	MRPL54	89	43.750	Ficedula_albicollis
ENSCING00000019896	-	74	42.593	ENSFDAG00000020803	MRPL54	77	42.593	Fukomys_damarensis
ENSCING00000019896	-	54	46.053	ENSGALG00000027611	MRPL54	76	41.304	Gallus_gallus
ENSCING00000019896	-	54	38.961	ENSGAFG00000016193	mrpl54	70	37.113	Gambusia_affinis
ENSCING00000019896	-	84	36.134	ENSGAGG00000020238	MRPL54	87	36.134	Gopherus_agassizii
ENSCING00000019896	-	72	39.806	ENSGGOG00000014722	MRPL54	75	39.806	Gorilla_gorilla
ENSCING00000019896	-	54	37.662	ENSHBUG00000009028	mrpl54	67	32.456	Haplochromis_burtoni
ENSCING00000019896	-	64	43.617	ENSHGLG00000006157	MRPL54	70	43.617	Heterocephalus_glaber_female
ENSCING00000019896	-	64	43.617	ENSHGLG00100000788	MRPL54	70	43.617	Heterocephalus_glaber_male
ENSCING00000019896	-	56	38.750	ENSHCOG00000000536	mrpl54	82	34.746	Hippocampus_comes
ENSCING00000019896	-	54	38.961	ENSIPUG00000024854	mrpl54	80	30.631	Ictalurus_punctatus
ENSCING00000019896	-	65	40.860	ENSSTOG00000022378	MRPL54	95	40.860	Ictidomys_tridecemlineatus
ENSCING00000019896	-	71	41.176	ENSJJAG00000020405	Mrpl54	74	41.176	Jaculus_jaculus
ENSCING00000019896	-	77	36.697	ENSKMAG00000022310	mrpl54	78	36.697	Kryptolebias_marmoratus
ENSCING00000019896	-	85	34.959	ENSLBEG00000005935	mrpl54	89	34.959	Labrus_bergylta
ENSCING00000019896	-	82	36.207	ENSLACG00000013912	MRPL54	80	36.207	Latimeria_chalumnae
ENSCING00000019896	-	54	38.961	ENSLOCG00000003860	mrpl54	56	38.961	Lepisosteus_oculatus
ENSCING00000019896	-	56	42.500	ENSLAFG00000029657	MRPL54	77	39.252	Loxodonta_africana
ENSCING00000019896	-	71	40.196	ENSMFAG00000003311	MRPL54	74	40.196	Macaca_fascicularis
ENSCING00000019896	-	71	40.196	ENSMMUG00000044080	MRPL54	74	40.196	Macaca_mulatta
ENSCING00000019896	-	71	40.196	ENSMNEG00000039499	MRPL54	74	40.196	Macaca_nemestrina
ENSCING00000019896	-	77	34.545	ENSMAMG00000003291	mrpl54	84	34.545	Mastacembelus_armatus
ENSCING00000019896	-	54	37.662	ENSMZEG00005009023	mrpl54	67	32.456	Maylandia_zebra
ENSCING00000019896	-	65	40.217	ENSMGAG00000000951	MRPL54	95	40.217	Meleagris_gallopavo
ENSCING00000019896	-	64	39.560	ENSMAUG00000009543	Mrpl54	67	39.560	Mesocricetus_auratus
ENSCING00000019896	-	56	42.500	ENSMICG00000034581	MRPL54	67	39.623	Microcebus_murinus
ENSCING00000019896	-	73	38.462	ENSMOCG00000017895	Mrpl54	75	38.462	Microtus_ochrogaster
ENSCING00000019896	-	83	31.933	ENSMMOG00000020370	mrpl54	93	34.483	Mola_mola
ENSCING00000019896	-	77	35.780	ENSMODG00000000602	MRPL54	77	35.780	Monodelphis_domestica
ENSCING00000019896	-	54	41.558	ENSMALG00000020280	mrpl54	83	34.211	Monopterus_albus
ENSCING00000019896	-	54	37.662	MGP_CAROLIEiJ_G0015629	Mrpl54	70	37.500	Mus_caroli
ENSCING00000019896	-	54	37.662	ENSMUSG00000034932	Mrpl54	84	34.783	Mus_musculus
ENSCING00000019896	-	63	39.130	MGP_PahariEiJ_G0031042	Mrpl54	68	39.130	Mus_pahari
ENSCING00000019896	-	54	37.662	MGP_SPRETEiJ_G0016447	Mrpl54	84	34.783	Mus_spretus
ENSCING00000019896	-	56	42.500	ENSMLUG00000010801	MRPL54	90	40.000	Myotis_lucifugus
ENSCING00000019896	-	56	37.500	ENSNGAG00000021044	Mrpl54	69	36.458	Nannospalax_galili
ENSCING00000019896	-	56	37.500	ENSNBRG00000000568	mrpl54	85	32.479	Neolamprologus_brichardi
ENSCING00000019896	-	61	42.222	ENSMEUG00000013033	MRPL54	68	42.222	Notamacropus_eugenii
ENSCING00000019896	-	70	35.000	ENSOPRG00000010035	-	72	35.000	Ochotona_princeps
ENSCING00000019896	-	65	42.105	ENSODEG00000013969	MRPL54	69	42.105	Octodon_degus
ENSCING00000019896	-	54	37.662	ENSONIG00000002312	mrpl54	74	32.456	Oreochromis_niloticus
ENSCING00000019896	-	77	35.780	ENSORLG00000016960	mrpl54	81	35.780	Oryzias_latipes
ENSCING00000019896	-	80	36.842	ENSORLG00020014934	mrpl54	93	38.144	Oryzias_latipes_hni
ENSCING00000019896	-	61	39.080	ENSORLG00015010788	mrpl54	68	39.080	Oryzias_latipes_hsok
ENSCING00000019896	-	56	37.500	ENSOMEG00000009005	mrpl54	72	36.000	Oryzias_melastigma
ENSCING00000019896	-	54	41.558	ENSOGAG00000026254	-	74	39.216	Otolemur_garnettii
ENSCING00000019896	-	56	41.250	ENSOGAG00000033519	-	77	38.679	Otolemur_garnettii
ENSCING00000019896	-	75	39.252	ENSPPAG00000042418	MRPL54	78	39.252	Pan_paniscus
ENSCING00000019896	-	65	39.785	ENSPPRG00000012325	MRPL54	70	39.785	Panthera_pardus
ENSCING00000019896	-	56	43.750	ENSPTIG00000017727	MRPL54	70	41.414	Panthera_tigris_altaica
ENSCING00000019896	-	75	39.252	ENSPTRG00000010276	MRPL54	78	39.252	Pan_troglodytes
ENSCING00000019896	-	71	40.196	ENSPANG00000033944	MRPL54	74	40.196	Papio_anubis
ENSCING00000019896	-	72	33.333	ENSPKIG00000009984	mrpl54	59	33.333	Paramormyrops_kingsleyae
ENSCING00000019896	-	73	41.346	ENSPSIG00000013587	MRPL54	100	41.346	Pelodiscus_sinensis
ENSCING00000019896	-	56	38.750	ENSPMGG00000015972	mrpl54	79	32.500	Periophthalmus_magnuspinnatus
ENSCING00000019896	-	69	40.404	ENSPEMG00000022929	Mrpl54	72	40.404	Peromyscus_maniculatus_bairdii
ENSCING00000019896	-	77	37.615	ENSPCIG00000025383	MRPL54	77	37.615	Phascolarctos_cinereus
ENSCING00000019896	-	54	37.662	ENSPFOG00000007409	mrpl54	56	37.662	Poecilia_formosa
ENSCING00000019896	-	54	37.662	ENSPLAG00000001633	mrpl54	56	37.662	Poecilia_latipinna
ENSCING00000019896	-	54	37.662	ENSPLAG00000001640	mrpl54	56	37.662	Poecilia_latipinna
ENSCING00000019896	-	54	37.662	ENSPMEG00000021068	mrpl54	56	37.662	Poecilia_mexicana
ENSCING00000019896	-	54	37.662	ENSPMEG00000021078	mrpl54	56	37.662	Poecilia_mexicana
ENSCING00000019896	-	54	38.961	ENSPREG00000012425	mrpl54	56	38.961	Poecilia_reticulata
ENSCING00000019896	-	72	40.777	ENSPPYG00000009386	MRPL54	75	40.777	Pongo_abelii
ENSCING00000019896	-	74	40.566	ENSPCAG00000000690	MRPL54	77	40.566	Procavia_capensis
ENSCING00000019896	-	56	42.500	ENSPCOG00000027550	MRPL54	77	39.623	Propithecus_coquereli
ENSCING00000019896	-	54	38.961	ENSPNYG00000022006	mrpl54	67	33.333	Pundamilia_nyererei
ENSCING00000019896	-	56	40.000	ENSPNAG00000000077	mrpl54	81	33.628	Pygocentrus_nattereri
ENSCING00000019896	-	63	39.130	ENSRNOG00000020464	Mrpl54	68	39.130	Rattus_norvegicus
ENSCING00000019896	-	71	41.176	ENSRBIG00000027038	MRPL54	76	41.176	Rhinopithecus_bieti
ENSCING00000019896	-	71	41.176	ENSRROG00000018776	MRPL54	76	41.176	Rhinopithecus_roxellana
ENSCING00000019896	-	65	38.043	ENSSBOG00000028081	MRPL54	67	38.043	Saimiri_boliviensis_boliviensis
ENSCING00000019896	-	54	42.105	ENSSHAG00000002557	MRPL54	82	39.655	Sarcophilus_harrisii
ENSCING00000019896	-	83	35.000	ENSSMAG00000009226	mrpl54	86	37.190	Scophthalmus_maximus
ENSCING00000019896	-	65	36.842	ENSSDUG00000009545	mrpl54	69	36.842	Seriola_dumerili
ENSCING00000019896	-	65	38.947	ENSSLDG00000001781	mrpl54	69	38.947	Seriola_lalandi_dorsalis
ENSCING00000019896	-	76	36.111	ENSSPUG00000015361	MRPL54	75	36.111	Sphenodon_punctatus
ENSCING00000019896	-	79	31.858	ENSSPAG00000003775	-	82	31.858	Stegastes_partitus
ENSCING00000019896	-	79	31.858	ENSSPAG00000015601	mrpl54	82	31.858	Stegastes_partitus
ENSCING00000019896	-	56	43.750	ENSSSCG00000024242	MRPL54	77	38.679	Sus_scrofa
ENSCING00000019896	-	56	40.000	ENSTRUG00000004609	mrpl54	86	32.773	Takifugu_rubripes
ENSCING00000019896	-	56	37.500	ENSTNIG00000015468	mrpl54	88	33.058	Tetraodon_nigroviridis
ENSCING00000019896	-	64	42.553	ENSTTRG00000004410	MRPL54	70	42.553	Tursiops_truncatus
ENSCING00000019896	-	56	43.750	ENSUAMG00000021572	MRPL54	70	40.625	Ursus_americanus
ENSCING00000019896	-	56	43.750	ENSUMAG00000007416	MRPL54	75	38.835	Ursus_maritimus
ENSCING00000019896	-	53	42.667	ENSVVUG00000004420	MRPL54	70	38.542	Vulpes_vulpes
ENSCING00000019896	-	73	35.577	ENSXETG00000033250	MRPL54	77	35.577	Xenopus_tropicalis
ENSCING00000019896	-	59	40.476	ENSXMAG00000003500	mrpl54	70	40.206	Xiphophorus_maculatus