EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020099 (Gene tree)
Gene ID: 100175214
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4140 bases
Position: chr7:5729397-5733536
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000007919	RimK	PF08443.11	3.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000007919	-	2117	-	ENSCINP00000007919	678 (aa)	-	F6YQT3

Gene Model

Click here to download ENSCING00000020099's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin00280	Valine, leucine and isoleucine degradation	KEGG
cin01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020099's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020099	-	99	57.540	ENSG00000078070	MCCC1	96	70.743	Homo_sapiens
ENSCING00000020099	-	99	56.579	ENSAMEG00000015967	MCCC1	92	56.871	Ailuropoda_melanoleuca
ENSCING00000020099	-	81	55.197	ENSACIG00000023146	mccc1	93	70.433	Amphilophus_citrinellus
ENSCING00000020099	-	99	58.017	ENSAPLG00000008989	MCCC1	94	58.017	Anas_platyrhynchos
ENSCING00000020099	-	99	56.369	ENSANAG00000028235	MCCC1	97	68.409	Aotus_nancymaae
ENSCING00000020099	-	96	59.276	ENSACLG00000026110	mccc1	98	58.394	Astatotilapia_calliptera
ENSCING00000020099	-	96	60.120	ENSAMXG00000001531	mccc1	94	59.064	Astyanax_mexicanus
ENSCING00000020099	-	99	56.515	ENSBTAG00000006548	MCCC1	92	56.808	Bos_taurus
ENSCING00000020099	-	99	56.076	ENSCJAG00000005103	MCCC1	97	69.596	Callithrix_jacchus
ENSCING00000020099	-	99	56.515	ENSCAFG00000011749	MCCC1	92	56.808	Canis_familiaris
ENSCING00000020099	-	99	56.515	ENSCAFG00020001000	MCCC1	92	56.808	Canis_lupus_dingo
ENSCING00000020099	-	99	57.247	ENSCHIG00000025794	MCCC1	96	56.214	Capra_hircus
ENSCING00000020099	-	99	57.247	ENSTSYG00000012606	MCCC1	95	70.531	Carlito_syrichta
ENSCING00000020099	-	99	57.456	ENSCAPG00000012269	MCCC1	97	57.456	Cavia_aperea
ENSCING00000020099	-	99	57.833	ENSCPOG00000010866	MCCC1	92	57.687	Cavia_porcellus
ENSCING00000020099	-	99	57.101	ENSCATG00000037699	MCCC1	97	69.359	Cercocebus_atys
ENSCING00000020099	-	87	57.475	ENSCLAG00000014174	MCCC1	99	57.237	Chinchilla_lanigera
ENSCING00000020099	-	99	57.247	ENSCSAG00000013226	MCCC1	92	57.247	Chlorocebus_sabaeus
ENSCING00000020099	-	99	57.580	ENSCPBG00000000534	MCCC1	94	57.580	Chrysemys_picta_bellii
ENSCING00000020099	-	99	98.220	ENSCING00000019260	-	93	98.220	Ciona_intestinalis
ENSCING00000020099	-	99	73.692	ENSCSAVG00000007062	-	100	71.186	Ciona_savignyi
ENSCING00000020099	-	90	56.501	ENSCANG00000037917	MCCC1	98	70.321	Colobus_angolensis_palliatus
ENSCING00000020099	-	96	59.063	ENSCGRG00001012469	Mccc1	94	58.041	Cricetulus_griseus_chok1gshd
ENSCING00000020099	-	96	59.063	ENSCGRG00000002616	Mccc1	94	58.041	Cricetulus_griseus_crigri
ENSCING00000020099	-	99	59.031	ENSCSEG00000019501	mccc1	93	58.892	Cynoglossus_semilaevis
ENSCING00000020099	-	99	57.941	ENSDARG00000102538	mccc1	95	57.956	Danio_rerio
ENSCING00000020099	-	99	56.268	ENSDNOG00000012070	MCCC1	92	56.268	Dasypus_novemcinctus
ENSCING00000020099	-	99	56.058	ENSDORG00000000473	Mccc1	97	56.058	Dipodomys_ordii
ENSCING00000020099	-	99	55.409	ENSETEG00000008384	MCCC1	92	55.409	Echinops_telfairi
ENSCING00000020099	-	56	70.725	ENSEBUG00000016250	-	91	70.725	Eptatretus_burgeri
ENSCING00000020099	-	85	72.149	ENSEASG00005015339	MCCC1	97	72.149	Equus_asinus_asinus
ENSCING00000020099	-	99	57.310	ENSECAG00000008214	MCCC1	93	57.310	Equus_caballus
ENSCING00000020099	-	92	50.789	ENSEEUG00000011233	MCCC1	90	50.625	Erinaceus_europaeus
ENSCING00000020099	-	97	59.193	ENSELUG00000010299	mccc1	99	58.394	Esox_lucius
ENSCING00000020099	-	90	55.466	ENSFCAG00000000940	MCCC1	95	70.290	Felis_catus
ENSCING00000020099	-	99	58.333	ENSFALG00000008252	MCCC1	94	58.333	Ficedula_albicollis
ENSCING00000020099	-	98	56.287	ENSFDAG00000009183	MCCC1	92	56.083	Fukomys_damarensis
ENSCING00000020099	-	97	57.630	ENSGMOG00000008521	mccc1	95	57.630	Gadus_morhua
ENSCING00000020099	-	99	57.540	ENSGALG00000008785	MCCC1	88	57.540	Gallus_gallus
ENSCING00000020099	-	98	58.910	ENSGAFG00000010643	mccc1	95	58.892	Gambusia_affinis
ENSCING00000020099	-	97	56.425	ENSGAGG00000000770	MCCC1	99	56.425	Gopherus_agassizii
ENSCING00000020099	-	99	57.394	ENSGGOG00000002784	MCCC1	96	71.223	Gorilla_gorilla
ENSCING00000020099	-	96	59.276	ENSHBUG00000000956	mccc1	94	58.540	Haplochromis_burtoni
ENSCING00000020099	-	99	57.540	ENSHGLG00000014650	MCCC1	93	57.540	Heterocephalus_glaber_female
ENSCING00000020099	-	99	57.540	ENSHGLG00100015295	MCCC1	93	57.540	Heterocephalus_glaber_male
ENSCING00000020099	-	97	58.569	ENSHCOG00000010503	mccc1	98	57.720	Hippocampus_comes
ENSCING00000020099	-	98	58.850	ENSIPUG00000024615	mccc1	95	58.540	Ictalurus_punctatus
ENSCING00000020099	-	99	56.955	ENSSTOG00000010361	MCCC1	92	56.955	Ictidomys_tridecemlineatus
ENSCING00000020099	-	99	53.947	ENSJJAG00000003543	Mccc1	93	54.240	Jaculus_jaculus
ENSCING00000020099	-	97	59.520	ENSLBEG00000001741	mccc1	91	59.205	Labrus_bergylta
ENSCING00000020099	-	99	58.832	ENSLACG00000018119	MCCC1	94	58.832	Latimeria_chalumnae
ENSCING00000020099	-	99	55.202	ENSLOCG00000000778	mccc1	94	55.202	Lepisosteus_oculatus
ENSCING00000020099	-	99	56.369	ENSLAFG00000018018	MCCC1	93	56.369	Loxodonta_africana
ENSCING00000020099	-	99	57.101	ENSMFAG00000000043	MCCC1	96	70.504	Macaca_fascicularis
ENSCING00000020099	-	90	56.431	ENSMMUG00000010553	MCCC1	97	70.944	Macaca_mulatta
ENSCING00000020099	-	98	54.748	ENSMNEG00000017163	MCCC1	97	66.588	Macaca_nemestrina
ENSCING00000020099	-	99	55.637	ENSMLEG00000039351	MCCC1	97	69.596	Mandrillus_leucophaeus
ENSCING00000020099	-	96	59.276	ENSMZEG00005015532	mccc1	94	58.540	Maylandia_zebra
ENSCING00000020099	-	99	57.980	ENSMGAG00000009494	MCCC1	97	57.787	Meleagris_gallopavo
ENSCING00000020099	-	99	56.955	ENSMICG00000048884	MCCC1	96	70.504	Microcebus_murinus
ENSCING00000020099	-	99	57.687	ENSMOCG00000003671	Mccc1	93	57.687	Microtus_ochrogaster
ENSCING00000020099	-	99	57.394	ENSMODG00000021288	MCCC1	92	57.394	Monodelphis_domestica
ENSCING00000020099	-	99	57.602	MGP_CAROLIEiJ_G0024932	Mccc1	93	57.602	Mus_caroli
ENSCING00000020099	-	99	57.687	ENSMUSG00000027709	Mccc1	93	57.687	Mus_musculus
ENSCING00000020099	-	99	57.687	MGP_SPRETEiJ_G0025866	Mccc1	93	57.687	Mus_spretus
ENSCING00000020099	-	99	56.433	ENSMPUG00000002371	MCCC1	84	56.433	Mustela_putorius_furo
ENSCING00000020099	-	96	58.761	ENSMLUG00000012257	MCCC1	90	58.761	Myotis_lucifugus
ENSCING00000020099	-	99	57.833	ENSNGAG00000001216	Mccc1	94	57.833	Nannospalax_galili
ENSCING00000020099	-	99	55.637	ENSNLEG00000005989	MCCC1	96	70.743	Nomascus_leucogenys
ENSCING00000020099	-	99	55.409	ENSOPRG00000007258	MCCC1	92	55.409	Ochotona_princeps
ENSCING00000020099	-	99	57.101	ENSODEG00000012286	MCCC1	97	56.831	Octodon_degus
ENSCING00000020099	-	96	59.729	ENSONIG00000008395	mccc1	94	58.978	Oreochromis_niloticus
ENSCING00000020099	-	97	56.972	ENSOANG00000011253	MCCC1	99	56.972	Ornithorhynchus_anatinus
ENSCING00000020099	-	99	54.466	ENSOCUG00000012393	MCCC1	92	54.466	Oryctolagus_cuniculus
ENSCING00000020099	-	98	58.763	ENSORLG00000011678	mccc1	96	58.746	Oryzias_latipes
ENSCING00000020099	-	98	58.910	ENSORLG00020005680	mccc1	96	58.892	Oryzias_latipes_hni
ENSCING00000020099	-	98	59.057	ENSORLG00015003526	mccc1	96	59.038	Oryzias_latipes_hsok
ENSCING00000020099	-	98	59.057	ENSOMEG00000011470	mccc1	94	59.038	Oryzias_melastigma
ENSCING00000020099	-	96	55.354	ENSOGAG00000000659	MCCC1	99	55.354	Otolemur_garnettii
ENSCING00000020099	-	99	56.662	ENSOARG00000020660	MCCC1	96	56.662	Ovis_aries
ENSCING00000020099	-	99	57.687	ENSPPAG00000036167	MCCC1	96	70.983	Pan_paniscus
ENSCING00000020099	-	90	55.466	ENSPPRG00000000127	MCCC1	95	70.290	Panthera_pardus
ENSCING00000020099	-	99	56.223	ENSPTIG00000018514	MCCC1	95	69.807	Panthera_tigris_altaica
ENSCING00000020099	-	99	57.687	ENSPTRG00000015662	MCCC1	96	70.983	Pan_troglodytes
ENSCING00000020099	-	99	57.394	ENSPANG00000006870	MCCC1	96	70.743	Papio_anubis
ENSCING00000020099	-	99	57.328	ENSPSIG00000017510	MCCC1	99	57.037	Pelodiscus_sinensis
ENSCING00000020099	-	97	54.641	ENSPMGG00000000155	mccc1	95	54.667	Periophthalmus_magnuspinnatus
ENSCING00000020099	-	99	57.749	ENSPEMG00000014164	Mccc1	94	57.749	Peromyscus_maniculatus_bairdii
ENSCING00000020099	-	99	57.226	ENSPCIG00000013027	MCCC1	79	57.226	Phascolarctos_cinereus
ENSCING00000020099	-	99	58.918	ENSPFOG00000019171	mccc1	94	59.184	Poecilia_formosa
ENSCING00000020099	-	98	59.352	ENSPLAG00000022735	mccc1	94	59.329	Poecilia_latipinna
ENSCING00000020099	-	98	59.057	ENSPMEG00000000664	mccc1	94	59.038	Poecilia_mexicana
ENSCING00000020099	-	99	57.687	ENSPPYG00000014331	MCCC1	92	57.687	Pongo_abelii
ENSCING00000020099	-	99	53.587	ENSPCAG00000003195	MCCC1	92	53.587	Procavia_capensis
ENSCING00000020099	-	99	56.955	ENSPCOG00000020095	MCCC1	96	70.264	Propithecus_coquereli
ENSCING00000020099	-	96	56.430	ENSPVAG00000013436	MCCC1	91	56.430	Pteropus_vampyrus
ENSCING00000020099	-	99	55.977	ENSPNAG00000025069	mccc1	95	55.988	Pygocentrus_nattereri
ENSCING00000020099	-	99	57.394	ENSRNOG00000013293	Mccc1	94	57.394	Rattus_norvegicus
ENSCING00000020099	-	99	57.456	ENSRBIG00000038726	MCCC1	96	70.504	Rhinopithecus_bieti
ENSCING00000020099	-	99	57.310	ENSRROG00000041247	MCCC1	96	70.264	Rhinopithecus_roxellana
ENSCING00000020099	-	97	55.772	ENSSBOG00000026219	MCCC1	98	69.359	Saimiri_boliviensis_boliviensis
ENSCING00000020099	-	99	56.749	ENSSHAG00000016104	MCCC1	97	56.749	Sarcophilus_harrisii
ENSCING00000020099	-	97	60.090	ENSSFOG00015007784	mccc1	95	59.190	Scleropages_formosus
ENSCING00000020099	-	98	58.616	ENSSMAG00000019667	mccc1	94	58.455	Scophthalmus_maximus
ENSCING00000020099	-	97	58.084	ENSSPUG00000014366	MCCC1	99	58.084	Sphenodon_punctatus
ENSCING00000020099	-	96	59.729	ENSSPAG00000011206	mccc1	99	56.661	Stegastes_partitus
ENSCING00000020099	-	99	54.026	ENSSSCG00000025942	MCCC1	95	56.522	Sus_scrofa
ENSCING00000020099	-	99	58.187	ENSTGUG00000010506	MCCC1	99	58.187	Taeniopygia_guttata
ENSCING00000020099	-	99	56.433	ENSTBEG00000007988	MCCC1	99	56.433	Tupaia_belangeri
ENSCING00000020099	-	99	56.808	ENSTTRG00000016518	MCCC1	92	56.808	Tursiops_truncatus
ENSCING00000020099	-	63	68.894	ENSUAMG00000008378	MCCC1	98	70.192	Ursus_americanus
ENSCING00000020099	-	99	56.662	ENSUMAG00000006927	MCCC1	92	56.662	Ursus_maritimus
ENSCING00000020099	-	99	56.223	ENSVVUG00000006835	MCCC1	92	56.223	Vulpes_vulpes
ENSCING00000020099	-	99	58.163	ENSXETG00000016826	mccc1	94	58.163	Xenopus_tropicalis