EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020446 (Gene tree)
Gene ID: 100180561
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 5137 bases
Position: chr11:3219284-3224420
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000033888	NUC153	PF08159.12	1.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031726	-	2251	-	ENSCINP00000033888	622 (aa)	-	H2XW54

Gene Model

Click here to download ENSCING00000020446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020446's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020446	-	89	50.746	ENSG00000089048	ESF1	68	45.260	Homo_sapiens
ENSCING00000020446	-	73	40.625	ENSACIG00000018305	esf1	91	37.838	Amphilophus_citrinellus
ENSCING00000020446	-	73	38.889	ENSAOCG00000006033	esf1	92	37.885	Amphiprion_ocellaris
ENSCING00000020446	-	73	38.163	ENSAPEG00000022385	esf1	89	35.942	Amphiprion_percula
ENSCING00000020446	-	88	55.224	ENSAPLG00000012113	ESF1	71	42.424	Anas_platyrhynchos
ENSCING00000020446	-	90	50.000	ENSACAG00000000963	ESF1	64	50.000	Anolis_carolinensis
ENSCING00000020446	-	73	39.802	ENSACLG00000002972	esf1	90	37.355	Astatotilapia_calliptera
ENSCING00000020446	-	52	46.547	ENSAMXG00000001172	esf1	92	37.719	Astyanax_mexicanus
ENSCING00000020446	-	88	50.000	ENSCHIG00000021188	ESF1	68	50.746	Capra_hircus
ENSCING00000020446	-	73	38.095	ENSCAPG00000010333	-	67	39.407	Cavia_aperea
ENSCING00000020446	-	99	70.032	ENSCSAVG00000009015	-	91	69.181	Ciona_savignyi
ENSCING00000020446	-	77	36.283	ENSCSEG00000001159	esf1	64	37.452	Cynoglossus_semilaevis
ENSCING00000020446	-	77	39.104	ENSCVAG00000007894	esf1	89	38.520	Cyprinodon_variegatus
ENSCING00000020446	-	89	51.562	ENSDNOG00000019409	ESF1	67	52.239	Dasypus_novemcinctus
ENSCING00000020446	-	87	50.794	ENSDORG00000016313	Esf1	67	51.515	Dipodomys_ordii
ENSCING00000020446	-	99	36.561	FBgn0024364	CG11417	64	40.200	Drosophila_melanogaster
ENSCING00000020446	-	66	51.562	ENSETEG00000004471	ESF1	50	46.591	Echinops_telfairi
ENSCING00000020446	-	63	52.239	ENSELUG00000000408	esf1	72	52.703	Esox_lucius
ENSCING00000020446	-	89	53.731	ENSFALG00000010914	ESF1	67	53.731	Ficedula_albicollis
ENSCING00000020446	-	89	52.239	ENSGALG00000034768	ESF1	75	45.977	Gallus_gallus
ENSCING00000020446	-	53	41.379	ENSGAFG00000000540	esf1	88	37.126	Gambusia_affinis
ENSCING00000020446	-	73	40.244	ENSHBUG00000001890	esf1	90	37.300	Haplochromis_burtoni
ENSCING00000020446	-	73	37.452	ENSIPUG00000006507	esf1	50	52.239	Ictalurus_punctatus
ENSCING00000020446	-	89	50.746	ENSLACG00000016439	ESF1	70	43.011	Latimeria_chalumnae
ENSCING00000020446	-	64	50.000	ENSLOCG00000015979	esf1	51	48.148	Lepisosteus_oculatus
ENSCING00000020446	-	95	51.562	ENSLAFG00000005479	ESF1	51	52.239	Loxodonta_africana
ENSCING00000020446	-	73	40.741	ENSMAMG00000018648	esf1	92	39.446	Mastacembelus_armatus
ENSCING00000020446	-	91	53.731	ENSMGAG00000004291	ESF1	68	53.731	Meleagris_gallopavo
ENSCING00000020446	-	89	50.794	ENSMAUG00000015975	Esf1	68	51.515	Mesocricetus_auratus
ENSCING00000020446	-	89	50.794	ENSMOCG00000005902	Esf1	68	51.515	Microtus_ochrogaster
ENSCING00000020446	-	89	53.030	ENSMODG00000005066	ESF1	66	53.030	Monodelphis_domestica
ENSCING00000020446	-	98	37.557	ENSMALG00000007338	esf1	90	38.152	Monopterus_albus
ENSCING00000020446	-	88	50.000	ENSNLEG00000014563	ESF1	66	50.746	Nomascus_leucogenys
ENSCING00000020446	-	70	38.320	ENSOPRG00000004862	ESF1	71	46.465	Ochotona_princeps
ENSCING00000020446	-	64	52.941	ENSONIG00000006804	esf1	90	36.963	Oreochromis_niloticus
ENSCING00000020446	-	98	40.039	ENSOANG00000008432	-	67	52.239	Ornithorhynchus_anatinus
ENSCING00000020446	-	68	37.691	ENSOMEG00000009311	esf1	87	38.972	Oryzias_melastigma
ENSCING00000020446	-	64	51.429	ENSPKIG00000024448	esf1	81	51.429	Paramormyrops_kingsleyae
ENSCING00000020446	-	65	49.333	ENSPMGG00000016911	esf1	51	48.718	Periophthalmus_magnuspinnatus
ENSCING00000020446	-	62	50.794	ENSPCIG00000019331	ESF1	69	51.515	Phascolarctos_cinereus
ENSCING00000020446	-	98	35.559	ENSPFOG00000010101	esf1	63	39.437	Poecilia_formosa
ENSCING00000020446	-	69	38.581	ENSPLAG00000006452	esf1	88	37.391	Poecilia_latipinna
ENSCING00000020446	-	98	36.686	ENSPMEG00000000713	esf1	89	36.484	Poecilia_mexicana
ENSCING00000020446	-	73	38.716	ENSPREG00000004431	esf1	63	37.449	Poecilia_reticulata
ENSCING00000020446	-	85	44.817	ENSPCAG00000006881	ESF1	61	45.455	Procavia_capensis
ENSCING00000020446	-	73	40.361	ENSPNYG00000015735	esf1	90	36.934	Pundamilia_nyererei
ENSCING00000020446	-	89	50.794	ENSRNOG00000004777	Esf1	58	43.500	Rattus_norvegicus
ENSCING00000020446	-	71	34.711	YDR365C	-	60	33.021	Saccharomyces_cerevisiae
ENSCING00000020446	-	97	50.794	ENSSHAG00000000449	ESF1	74	51.515	Sarcophilus_harrisii
ENSCING00000020446	-	73	39.407	ENSSDUG00000019460	esf1	90	38.695	Seriola_dumerili
ENSCING00000020446	-	90	51.515	ENSSPUG00000012635	ESF1	75	41.165	Sphenodon_punctatus
ENSCING00000020446	-	73	39.250	ENSSPAG00000019077	esf1	89	38.604	Stegastes_partitus
ENSCING00000020446	-	88	51.562	ENSTGUG00000002450	ESF1	66	52.239	Taeniopygia_guttata
ENSCING00000020446	-	98	36.111	ENSTRUG00000009445	esf1	92	37.647	Takifugu_rubripes
ENSCING00000020446	-	89	48.438	ENSTTRG00000005335	ESF1	67	49.254	Tursiops_truncatus
ENSCING00000020446	-	89	48.485	ENSXETG00000008079	esf1	76	49.254	Xenopus_tropicalis
ENSCING00000020446	-	73	38.320	ENSXMAG00000017651	esf1	92	36.202	Xiphophorus_maculatus