EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020481 (Gene tree)
Gene ID: 100183985
Gene Symbol: -
Alias: -
Full Name: pre-mRNA-splicing factor 18-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2572 bases
Position: chrHT001093.1:15675-18246
Accession: 100183985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000030051	PRP4	PF08799.11	1.5e-11	1	1
ENSCINP00000030051	Prp18	PF02840.15	6.8e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000033296	-	1094	XM_002129748	ENSCINP00000030051	348 (aa)	XP_002129784	H2XK69

Gene Model

Click here to download ENSCING00000020481's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020481's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020481	-	97	54.706	ENSG00000165630	PRPF18	99	54.706	Homo_sapiens
ENSCING00000020481	-	97	56.176	ENSAPOG00000024177	prpf18	99	56.176	Acanthochromis_polyacanthus
ENSCING00000020481	-	97	54.412	ENSAMEG00000013591	-	99	54.412	Ailuropoda_melanoleuca
ENSCING00000020481	-	97	55.072	ENSACIG00000001186	prpf18	99	55.882	Amphilophus_citrinellus
ENSCING00000020481	-	98	54.441	ENSAOCG00000006572	prpf18	96	54.441	Amphiprion_ocellaris
ENSCING00000020481	-	97	56.176	ENSAPEG00000004564	prpf18	99	56.176	Amphiprion_percula
ENSCING00000020481	-	97	57.143	ENSATEG00000000303	prpf18	99	57.143	Anabas_testudineus
ENSCING00000020481	-	98	53.448	ENSAPLG00000003387	-	99	54.227	Anas_platyrhynchos
ENSCING00000020481	-	97	56.305	ENSACAG00000000818	-	99	56.305	Anolis_carolinensis
ENSCING00000020481	-	97	54.706	ENSANAG00000037445	-	99	54.706	Aotus_nancymaae
ENSCING00000020481	-	97	55.072	ENSACLG00000026296	prpf18	99	55.882	Astatotilapia_calliptera
ENSCING00000020481	-	97	55.908	ENSAMXG00000012848	prpf18	99	55.908	Astyanax_mexicanus
ENSCING00000020481	-	97	54.412	ENSBTAG00000017244	PRPF18	99	54.412	Bos_taurus
ENSCING00000020481	-	98	37.288	WBGene00009320	F32B6.3	99	37.288	Caenorhabditis_elegans
ENSCING00000020481	-	97	54.706	ENSCJAG00000009432	-	99	54.706	Callithrix_jacchus
ENSCING00000020481	-	97	54.412	ENSCAFG00000004735	-	99	54.412	Canis_familiaris
ENSCING00000020481	-	97	54.412	ENSCAFG00020007712	-	99	54.412	Canis_lupus_dingo
ENSCING00000020481	-	97	54.412	ENSCHIG00000000499	-	99	54.412	Capra_hircus
ENSCING00000020481	-	97	55.294	ENSTSYG00000003517	-	99	55.294	Carlito_syrichta
ENSCING00000020481	-	97	54.706	ENSCPOG00000021069	-	99	54.706	Cavia_porcellus
ENSCING00000020481	-	97	54.706	ENSCCAG00000036822	-	99	54.706	Cebus_capucinus
ENSCING00000020481	-	97	46.765	ENSCATG00000016633	-	99	46.765	Cercocebus_atys
ENSCING00000020481	-	97	54.412	ENSCLAG00000011770	-	99	54.412	Chinchilla_lanigera
ENSCING00000020481	-	97	52.101	ENSCSAG00000013109	-	99	52.661	Chlorocebus_sabaeus
ENSCING00000020481	-	97	51.676	ENSCPBG00000003100	-	99	54.469	Chrysemys_picta_bellii
ENSCING00000020481	-	99	85.423	ENSCSAVG00000010546	-	99	85.423	Ciona_savignyi
ENSCING00000020481	-	97	54.706	ENSCANG00000034900	-	99	54.706	Colobus_angolensis_palliatus
ENSCING00000020481	-	97	54.706	ENSCGRG00001023665	Prpf18	99	54.706	Cricetulus_griseus_chok1gshd
ENSCING00000020481	-	97	54.706	ENSCGRG00000014690	Prpf18	99	54.706	Cricetulus_griseus_crigri
ENSCING00000020481	-	97	55.588	ENSCSEG00000005536	prpf18	99	55.588	Cynoglossus_semilaevis
ENSCING00000020481	-	97	55.882	ENSCVAG00000012401	prpf18	99	55.882	Cyprinodon_variegatus
ENSCING00000020481	-	97	56.395	ENSDARG00000058306	prpf18	99	56.395	Danio_rerio
ENSCING00000020481	-	97	54.706	ENSDNOG00000035607	-	99	54.706	Dasypus_novemcinctus
ENSCING00000020481	-	97	54.706	ENSDORG00000000858	Prpf18	99	54.706	Dipodomys_ordii
ENSCING00000020481	-	97	47.929	FBgn0027784	Prp18	97	47.929	Drosophila_melanogaster
ENSCING00000020481	-	76	55.263	ENSETEG00000015060	-	99	48.547	Echinops_telfairi
ENSCING00000020481	-	99	53.736	ENSEBUG00000016502	prpf18	99	53.736	Eptatretus_burgeri
ENSCING00000020481	-	97	54.706	ENSEASG00005019373	-	99	54.706	Equus_asinus_asinus
ENSCING00000020481	-	97	54.706	ENSECAG00000006997	PRPF18	99	54.706	Equus_caballus
ENSCING00000020481	-	72	86.538	ENSEEUG00000001171	-	79	86.538	Erinaceus_europaeus
ENSCING00000020481	-	97	56.936	ENSELUG00000022190	prpf18	99	56.936	Esox_lucius
ENSCING00000020481	-	97	54.412	ENSFCAG00000004436	-	99	54.412	Felis_catus
ENSCING00000020481	-	90	51.515	ENSFALG00000001912	-	97	53.251	Ficedula_albicollis
ENSCING00000020481	-	91	55.346	ENSFDAG00000014026	-	99	55.346	Fukomys_damarensis
ENSCING00000020481	-	89	40.317	ENSFDAG00000010713	-	90	40.317	Fukomys_damarensis
ENSCING00000020481	-	78	58.824	ENSFHEG00000020125	prpf18	99	58.824	Fundulus_heteroclitus
ENSCING00000020481	-	98	56.598	ENSGMOG00000012210	prpf18	99	56.598	Gadus_morhua
ENSCING00000020481	-	97	54.624	ENSGALG00000043593	-	99	55.425	Gallus_gallus
ENSCING00000020481	-	97	56.851	ENSGAFG00000006034	prpf18	99	56.851	Gambusia_affinis
ENSCING00000020481	-	97	55.102	ENSGACG00000012232	prpf18	99	55.102	Gasterosteus_aculeatus
ENSCING00000020481	-	97	54.070	ENSGAGG00000016878	-	99	54.942	Gopherus_agassizii
ENSCING00000020481	-	90	53.016	ENSGGOG00000025188	-	96	53.016	Gorilla_gorilla
ENSCING00000020481	-	97	55.620	ENSHBUG00000010264	prpf18	99	55.882	Haplochromis_burtoni
ENSCING00000020481	-	97	54.706	ENSHGLG00000018534	PRPF18	99	54.706	Heterocephalus_glaber_female
ENSCING00000020481	-	91	55.660	ENSHGLG00100012161	-	97	55.660	Heterocephalus_glaber_male
ENSCING00000020481	-	97	56.176	ENSHCOG00000015987	prpf18	99	56.176	Hippocampus_comes
ENSCING00000020481	-	97	53.868	ENSIPUG00000007432	prpf18	99	54.131	Ictalurus_punctatus
ENSCING00000020481	-	97	54.118	ENSSTOG00000008735	-	99	54.118	Ictidomys_tridecemlineatus
ENSCING00000020481	-	97	54.706	ENSJJAG00000024041	-	99	54.706	Jaculus_jaculus
ENSCING00000020481	-	97	38.416	ENSJJAG00000015191	-	99	38.416	Jaculus_jaculus
ENSCING00000020481	-	97	55.043	ENSKMAG00000012124	prpf18	99	56.268	Kryptolebias_marmoratus
ENSCING00000020481	-	95	55.060	ENSLBEG00000028466	prpf18	97	55.060	Labrus_bergylta
ENSCING00000020481	-	97	55.294	ENSLACG00000009885	prpf18	99	56.305	Latimeria_chalumnae
ENSCING00000020481	-	97	56.395	ENSLOCG00000016736	prpf18	99	56.395	Lepisosteus_oculatus
ENSCING00000020481	-	97	54.706	ENSLAFG00000007753	-	99	54.706	Loxodonta_africana
ENSCING00000020481	-	97	54.706	ENSMFAG00000000540	-	99	54.706	Macaca_fascicularis
ENSCING00000020481	-	97	54.706	ENSMMUG00000015071	PRPF18	95	63.462	Macaca_mulatta
ENSCING00000020481	-	97	54.706	ENSMNEG00000024679	-	99	54.706	Macaca_nemestrina
ENSCING00000020481	-	97	41.471	ENSMLEG00000031715	-	99	41.471	Mandrillus_leucophaeus
ENSCING00000020481	-	97	56.560	ENSMAMG00000006610	prpf18	99	56.560	Mastacembelus_armatus
ENSCING00000020481	-	97	55.620	ENSMZEG00005019392	prpf18	99	55.882	Maylandia_zebra
ENSCING00000020481	-	97	54.624	ENSMGAG00000005023	-	99	55.425	Meleagris_gallopavo
ENSCING00000020481	-	97	55.000	ENSMICG00000006572	-	99	55.000	Microcebus_murinus
ENSCING00000020481	-	97	54.706	ENSMOCG00000021468	Prpf18	99	54.706	Microtus_ochrogaster
ENSCING00000020481	-	97	56.725	ENSMMOG00000013012	prpf18	99	56.725	Mola_mola
ENSCING00000020481	-	90	50.301	ENSMODG00000016902	-	90	50.904	Monodelphis_domestica
ENSCING00000020481	-	97	53.982	ENSMODG00000024043	-	99	53.982	Monodelphis_domestica
ENSCING00000020481	-	97	51.977	ENSMALG00000005486	prpf18	99	52.542	Monopterus_albus
ENSCING00000020481	-	97	54.706	MGP_CAROLIEiJ_G0023143	Prpf18	100	64.384	Mus_caroli
ENSCING00000020481	-	97	55.000	ENSMUSG00000039449	Prpf18	100	64.384	Mus_musculus
ENSCING00000020481	-	97	54.706	MGP_PahariEiJ_G0019203	Prpf18	100	64.384	Mus_pahari
ENSCING00000020481	-	97	55.000	MGP_SPRETEiJ_G0024061	Prpf18	100	64.384	Mus_spretus
ENSCING00000020481	-	97	54.118	ENSMPUG00000000938	-	99	54.118	Mustela_putorius_furo
ENSCING00000020481	-	97	54.706	ENSMLUG00000009200	-	99	54.706	Myotis_lucifugus
ENSCING00000020481	-	97	54.706	ENSNGAG00000012500	-	99	54.706	Nannospalax_galili
ENSCING00000020481	-	66	51.515	ENSNGAG00000023550	-	83	51.515	Nannospalax_galili
ENSCING00000020481	-	97	56.851	ENSNBRG00000001778	prpf18	99	56.851	Neolamprologus_brichardi
ENSCING00000020481	-	97	54.706	ENSNLEG00000012186	-	99	54.706	Nomascus_leucogenys
ENSCING00000020481	-	74	47.674	ENSMEUG00000005032	-	75	47.674	Notamacropus_eugenii
ENSCING00000020481	-	76	34.848	ENSOPRG00000002153	-	99	34.848	Ochotona_princeps
ENSCING00000020481	-	97	54.706	ENSODEG00000003770	-	99	54.706	Octodon_degus
ENSCING00000020481	-	96	54.572	ENSONIG00000014854	prpf18	95	55.389	Oreochromis_niloticus
ENSCING00000020481	-	97	54.118	ENSOANG00000015404	-	99	54.545	Ornithorhynchus_anatinus
ENSCING00000020481	-	97	54.412	ENSOCUG00000027756	-	93	55.346	Oryctolagus_cuniculus
ENSCING00000020481	-	97	54.179	ENSORLG00000010293	prpf18	99	54.179	Oryzias_latipes
ENSCING00000020481	-	97	54.179	ENSORLG00020001530	prpf18	99	54.706	Oryzias_latipes_hni
ENSCING00000020481	-	97	53.890	ENSORLG00015013705	prpf18	99	54.412	Oryzias_latipes_hsok
ENSCING00000020481	-	97	54.493	ENSOMEG00000009167	prpf18	99	55.588	Oryzias_melastigma
ENSCING00000020481	-	97	53.529	ENSOGAG00000007294	-	99	53.529	Otolemur_garnettii
ENSCING00000020481	-	97	53.235	ENSOARG00000006243	-	99	53.235	Ovis_aries
ENSCING00000020481	-	97	54.706	ENSPPAG00000041959	-	99	54.706	Pan_paniscus
ENSCING00000020481	-	97	54.412	ENSPPRG00000000107	-	99	54.412	Panthera_pardus
ENSCING00000020481	-	97	54.412	ENSPTIG00000021094	-	99	54.412	Panthera_tigris_altaica
ENSCING00000020481	-	97	54.706	ENSPTRG00000002306	PRPF18	99	54.706	Pan_troglodytes
ENSCING00000020481	-	97	55.000	ENSPANG00000023346	-	99	55.000	Papio_anubis
ENSCING00000020481	-	90	84.906	ENSPKIG00000014128	prpf18	75	84.906	Paramormyrops_kingsleyae
ENSCING00000020481	-	97	54.335	ENSPSIG00000016064	-	99	56.012	Pelodiscus_sinensis
ENSCING00000020481	-	97	52.174	ENSPMGG00000016486	prpf18	99	52.632	Periophthalmus_magnuspinnatus
ENSCING00000020481	-	97	54.706	ENSPEMG00000013704	Prpf18	99	54.706	Peromyscus_maniculatus_bairdii
ENSCING00000020481	-	99	57.184	ENSPMAG00000000204	prpf18	99	57.184	Petromyzon_marinus
ENSCING00000020481	-	90	52.698	ENSPCIG00000012963	-	98	52.698	Phascolarctos_cinereus
ENSCING00000020481	-	97	55.331	ENSPFOG00000017611	prpf18	99	55.331	Poecilia_formosa
ENSCING00000020481	-	97	55.362	ENSPLAG00000000369	prpf18	99	56.176	Poecilia_latipinna
ENSCING00000020481	-	97	55.362	ENSPMEG00000005183	prpf18	99	56.176	Poecilia_mexicana
ENSCING00000020481	-	97	55.882	ENSPREG00000015232	prpf18	99	55.882	Poecilia_reticulata
ENSCING00000020481	-	97	54.706	ENSPPYG00000002101	PRPF18	99	54.706	Pongo_abelii
ENSCING00000020481	-	97	41.471	ENSPCAG00000010833	-	99	41.471	Procavia_capensis
ENSCING00000020481	-	97	52.059	ENSPCOG00000013057	-	99	52.647	Propithecus_coquereli
ENSCING00000020481	-	97	32.059	ENSPVAG00000002947	-	99	32.059	Pteropus_vampyrus
ENSCING00000020481	-	97	55.908	ENSPNYG00000003554	prpf18	99	56.176	Pundamilia_nyererei
ENSCING00000020481	-	97	53.143	ENSPNAG00000023151	prpf18	99	54.598	Pygocentrus_nattereri
ENSCING00000020481	-	97	54.412	ENSRNOG00000018396	Prpf18	99	54.412	Rattus_norvegicus
ENSCING00000020481	-	97	55.000	ENSRBIG00000028028	-	99	55.000	Rhinopithecus_bieti
ENSCING00000020481	-	97	54.706	ENSRROG00000040695	-	99	54.706	Rhinopithecus_roxellana
ENSCING00000020481	-	97	54.706	ENSSBOG00000034482	-	99	54.706	Saimiri_boliviensis_boliviensis
ENSCING00000020481	-	97	54.118	ENSSHAG00000016463	-	99	54.118	Sarcophilus_harrisii
ENSCING00000020481	-	97	52.199	ENSSHAG00000009669	-	99	52.199	Sarcophilus_harrisii
ENSCING00000020481	-	68	34.043	ENSSFOG00015021154	-	90	34.043	Scleropages_formosus
ENSCING00000020481	-	96	56.433	ENSSFOG00015022118	prpf18	99	53.043	Scleropages_formosus
ENSCING00000020481	-	97	55.685	ENSSMAG00000005308	prpf18	99	55.685	Scophthalmus_maximus
ENSCING00000020481	-	97	56.851	ENSSDUG00000015428	prpf18	99	56.851	Seriola_dumerili
ENSCING00000020481	-	97	56.560	ENSSLDG00000023989	prpf18	99	56.560	Seriola_lalandi_dorsalis
ENSCING00000020481	-	97	36.176	ENSSARG00000005307	-	99	37.135	Sorex_araneus
ENSCING00000020481	-	97	54.651	ENSSPUG00000002619	-	99	55.685	Sphenodon_punctatus
ENSCING00000020481	-	97	55.294	ENSSPAG00000019502	prpf18	99	55.294	Stegastes_partitus
ENSCING00000020481	-	97	54.412	ENSSSCG00000026354	-	99	54.412	Sus_scrofa
ENSCING00000020481	-	97	54.913	ENSTGUG00000002286	-	99	56.433	Taeniopygia_guttata
ENSCING00000020481	-	97	56.765	ENSTRUG00000011278	prpf18	99	56.765	Takifugu_rubripes
ENSCING00000020481	-	97	56.471	ENSTNIG00000000911	prpf18	99	56.471	Tetraodon_nigroviridis
ENSCING00000020481	-	56	83.117	ENSTBEG00000013011	-	78	83.117	Tupaia_belangeri
ENSCING00000020481	-	97	54.706	ENSTTRG00000011117	PRPF18	99	54.706	Tursiops_truncatus
ENSCING00000020481	-	76	59.023	ENSUAMG00000001815	-	93	54.662	Ursus_americanus
ENSCING00000020481	-	97	52.353	ENSUMAG00000012329	-	99	52.353	Ursus_maritimus
ENSCING00000020481	-	97	50.294	ENSVPAG00000011486	-	99	50.294	Vicugna_pacos
ENSCING00000020481	-	97	54.412	ENSVVUG00000005453	-	99	54.412	Vulpes_vulpes
ENSCING00000020481	-	97	53.936	ENSXETG00000024057	prpf18	99	53.936	Xenopus_tropicalis
ENSCING00000020481	-	97	56.105	ENSXCOG00000020414	prpf18	99	56.105	Xiphophorus_couchianus
ENSCING00000020481	-	97	55.294	ENSXMAG00000004713	prpf18	90	55.294	Xiphophorus_maculatus