EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020531 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerase II subunit RPB11-a
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1434 bases
Position: chr2:355792-357225
Accession: 100181341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000030207	RNA_pol_L_2	PF13656.6	6.9e-30	1	1
ENSCINP00000030207	RNA_pol_L	PF01193.24	1.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031742	-	797	-	ENSCINP00000030207	117 (aa)	XP_009857532	H2XKM5

Gene Model

Click here to download ENSCING00000020531's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020531's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020531	-	100	81.197	ENSG00000005075	POLR2J	100	81.197	Homo_sapiens
ENSCING00000020531	-	91	83.019	ENSG00000228049	POLR2J2	94	80.734	Homo_sapiens
ENSCING00000020531	-	100	82.051	ENSAPOG00000019538	polr2j	100	82.051	Acanthochromis_polyacanthus
ENSCING00000020531	-	100	74.803	ENSAMEG00000015480	-	100	74.803	Ailuropoda_melanoleuca
ENSCING00000020531	-	93	63.636	ENSACIG00000014549	POLR2J2	91	63.636	Amphilophus_citrinellus
ENSCING00000020531	-	100	81.197	ENSAOCG00000006937	polr2j	100	81.197	Amphiprion_ocellaris
ENSCING00000020531	-	100	82.051	ENSAPEG00000021761	polr2j	100	82.051	Amphiprion_percula
ENSCING00000020531	-	100	82.051	ENSATEG00000013312	-	100	82.051	Anabas_testudineus
ENSCING00000020531	-	100	82.051	ENSATEG00000009731	polr2j	100	82.051	Anabas_testudineus
ENSCING00000020531	-	86	78.218	ENSAPLG00000003744	-	100	78.218	Anas_platyrhynchos
ENSCING00000020531	-	100	74.359	ENSACAG00000000251	POLR2J	100	74.359	Anolis_carolinensis
ENSCING00000020531	-	100	82.051	ENSACLG00000014564	polr2j	100	82.051	Astatotilapia_calliptera
ENSCING00000020531	-	100	82.051	ENSAMXG00000007517	polr2j	100	82.051	Astyanax_mexicanus
ENSCING00000020531	-	62	58.904	ENSBTAG00000048046	-	61	58.904	Bos_taurus
ENSCING00000020531	-	98	65.217	WBGene00012187	rpb-11	93	65.217	Caenorhabditis_elegans
ENSCING00000020531	-	100	81.197	ENSCJAG00000016203	-	100	81.197	Callithrix_jacchus
ENSCING00000020531	-	100	81.197	ENSCAFG00000013683	-	100	81.197	Canis_familiaris
ENSCING00000020531	-	85	79.798	ENSTSYG00000029243	-	85	79.798	Carlito_syrichta
ENSCING00000020531	-	100	81.197	ENSCPOG00000001401	-	100	81.197	Cavia_porcellus
ENSCING00000020531	-	100	62.393	ENSCATG00000016595	-	86	78.049	Cercocebus_atys
ENSCING00000020531	-	100	81.197	ENSCLAG00000005238	-	100	81.197	Chinchilla_lanigera
ENSCING00000020531	-	100	81.197	ENSCSAG00000018092	-	100	81.197	Chlorocebus_sabaeus
ENSCING00000020531	-	100	97.436	ENSCSAVG00000006948	-	100	97.436	Ciona_savignyi
ENSCING00000020531	-	100	81.197	ENSCGRG00001012814	Polr2j	100	81.197	Cricetulus_griseus_chok1gshd
ENSCING00000020531	-	100	67.521	ENSCGRG00000008433	Polr2j	100	67.521	Cricetulus_griseus_crigri
ENSCING00000020531	-	100	81.197	ENSCSEG00000020352	polr2j	100	81.197	Cynoglossus_semilaevis
ENSCING00000020531	-	100	82.051	ENSCVAG00000014267	polr2j	100	82.051	Cyprinodon_variegatus
ENSCING00000020531	-	100	82.051	ENSDARG00000035146	polr2j	100	82.051	Danio_rerio
ENSCING00000020531	-	100	81.197	ENSDORG00000005934	Polr2j	100	81.197	Dipodomys_ordii
ENSCING00000020531	-	98	72.174	FBgn0032634	Rpb11	98	72.174	Drosophila_melanogaster
ENSCING00000020531	-	100	57.265	ENSEBUG00000016100	polr2j	100	57.265	Eptatretus_burgeri
ENSCING00000020531	-	100	81.197	ENSEASG00005016864	-	100	81.197	Equus_asinus_asinus
ENSCING00000020531	-	100	81.197	ENSELUG00000012822	polr2j	100	81.197	Esox_lucius
ENSCING00000020531	-	100	81.197	ENSFCAG00000000377	-	100	81.197	Felis_catus
ENSCING00000020531	-	100	81.197	ENSFALG00000009523	POLR2J	100	81.197	Ficedula_albicollis
ENSCING00000020531	-	100	81.197	ENSFDAG00000010507	-	100	81.197	Fukomys_damarensis
ENSCING00000020531	-	100	82.051	ENSFHEG00000006625	polr2j	100	82.051	Fundulus_heteroclitus
ENSCING00000020531	-	100	82.051	ENSGMOG00000018207	polr2j	100	82.051	Gadus_morhua
ENSCING00000020531	-	100	81.197	ENSGALG00000030808	-	100	81.197	Gallus_gallus
ENSCING00000020531	-	100	82.051	ENSGAFG00000019555	polr2j	100	82.051	Gambusia_affinis
ENSCING00000020531	-	100	82.051	ENSGACG00000003310	polr2j	100	82.051	Gasterosteus_aculeatus
ENSCING00000020531	-	97	73.451	ENSGAGG00000018304	-	96	73.451	Gopherus_agassizii
ENSCING00000020531	-	85	76.000	ENSGGOG00000004519	-	80	76.000	Gorilla_gorilla
ENSCING00000020531	-	100	82.051	ENSHBUG00000008467	polr2j	100	82.051	Haplochromis_burtoni
ENSCING00000020531	-	100	81.197	ENSHGLG00000013598	POLR2J	100	81.197	Heterocephalus_glaber_female
ENSCING00000020531	-	100	81.197	ENSHGLG00100011242	POLR2J	100	81.197	Heterocephalus_glaber_male
ENSCING00000020531	-	100	81.197	ENSHCOG00000014827	polr2j	68	81.197	Hippocampus_comes
ENSCING00000020531	-	100	82.051	ENSIPUG00000023960	polr2j	100	82.051	Ictalurus_punctatus
ENSCING00000020531	-	100	81.197	ENSSTOG00000006377	POLR2J	100	81.197	Ictidomys_tridecemlineatus
ENSCING00000020531	-	100	81.197	ENSJJAG00000013854	-	100	81.197	Jaculus_jaculus
ENSCING00000020531	-	100	77.778	ENSJJAG00000018834	-	100	77.778	Jaculus_jaculus
ENSCING00000020531	-	100	82.051	ENSKMAG00000014581	polr2j	79	82.051	Kryptolebias_marmoratus
ENSCING00000020531	-	100	82.906	ENSLBEG00000005885	polr2j	100	82.906	Labrus_bergylta
ENSCING00000020531	-	100	82.051	ENSLOCG00000001885	polr2j	89	82.051	Lepisosteus_oculatus
ENSCING00000020531	-	100	81.197	ENSLAFG00000021507	-	100	81.197	Loxodonta_africana
ENSCING00000020531	-	100	73.077	ENSMMUG00000012019	POLR2J	100	73.077	Macaca_mulatta
ENSCING00000020531	-	100	82.906	ENSMAMG00000009374	polr2j	100	82.906	Mastacembelus_armatus
ENSCING00000020531	-	100	82.051	ENSMZEG00005011932	polr2j	100	82.051	Maylandia_zebra
ENSCING00000020531	-	100	81.197	ENSMGAG00000003534	POLR2J	100	81.197	Meleagris_gallopavo
ENSCING00000020531	-	100	81.197	ENSMAUG00000013049	Polr2j	100	81.197	Mesocricetus_auratus
ENSCING00000020531	-	80	79.787	ENSMICG00000026811	-	95	79.787	Microcebus_murinus
ENSCING00000020531	-	100	81.197	ENSMOCG00000001294	Polr2j	100	81.197	Microtus_ochrogaster
ENSCING00000020531	-	100	82.051	ENSMMOG00000013265	polr2j	100	82.051	Mola_mola
ENSCING00000020531	-	100	74.219	ENSMODG00000013617	-	100	74.219	Monodelphis_domestica
ENSCING00000020531	-	100	82.906	ENSMALG00000020749	polr2j	100	82.906	Monopterus_albus
ENSCING00000020531	-	100	81.197	MGP_CAROLIEiJ_G0027851	Polr2j	100	81.197	Mus_caroli
ENSCING00000020531	-	100	81.197	ENSMUSG00000039771	Polr2j	100	81.197	Mus_musculus
ENSCING00000020531	-	100	81.197	MGP_PahariEiJ_G0024434	Polr2j	100	81.197	Mus_pahari
ENSCING00000020531	-	100	81.197	MGP_SPRETEiJ_G0028853	Polr2j	100	81.197	Mus_spretus
ENSCING00000020531	-	100	81.197	ENSMLUG00000010467	POLR2J	100	81.197	Myotis_lucifugus
ENSCING00000020531	-	100	81.197	ENSNGAG00000023412	Polr2j	100	81.197	Nannospalax_galili
ENSCING00000020531	-	66	83.117	ENSNBRG00000006580	polr2j	59	83.117	Neolamprologus_brichardi
ENSCING00000020531	-	100	81.197	ENSODEG00000015648	-	100	81.250	Octodon_degus
ENSCING00000020531	-	100	66.667	ENSODEG00000008559	-	100	66.667	Octodon_degus
ENSCING00000020531	-	100	82.051	ENSONIG00000000259	polr2j	100	82.051	Oreochromis_niloticus
ENSCING00000020531	-	100	78.632	ENSOANG00000020912	POLR2J	100	78.632	Ornithorhynchus_anatinus
ENSCING00000020531	-	100	74.803	ENSOCUG00000023609	POLR2J	100	74.803	Oryctolagus_cuniculus
ENSCING00000020531	-	100	82.051	ENSORLG00000029046	polr2j	83	82.051	Oryzias_latipes
ENSCING00000020531	-	100	82.051	ENSORLG00020007625	polr2j	83	82.051	Oryzias_latipes_hni
ENSCING00000020531	-	100	82.051	ENSORLG00015003457	polr2j	83	82.051	Oryzias_latipes_hsok
ENSCING00000020531	-	100	82.051	ENSOMEG00000002097	polr2j	100	82.051	Oryzias_melastigma
ENSCING00000020531	-	100	60.156	ENSOGAG00000008250	-	100	60.156	Otolemur_garnettii
ENSCING00000020531	-	100	81.197	ENSOARG00000014204	-	98	81.197	Ovis_aries
ENSCING00000020531	-	100	81.197	ENSPPRG00000012439	-	100	81.197	Panthera_pardus
ENSCING00000020531	-	97	72.807	ENSPTIG00000018714	-	100	77.670	Panthera_tigris_altaica
ENSCING00000020531	-	85	79.000	ENSPSIG00000010173	-	100	79.000	Pelodiscus_sinensis
ENSCING00000020531	-	100	82.051	ENSPMGG00000021256	polr2j	100	82.051	Periophthalmus_magnuspinnatus
ENSCING00000020531	-	100	81.197	ENSPEMG00000015733	Polr2j	100	81.197	Peromyscus_maniculatus_bairdii
ENSCING00000020531	-	100	81.197	ENSPCIG00000009026	-	100	81.197	Phascolarctos_cinereus
ENSCING00000020531	-	100	82.051	ENSPFOG00000012001	polr2j	99	82.051	Poecilia_formosa
ENSCING00000020531	-	100	82.051	ENSPLAG00000014075	polr2j	100	82.051	Poecilia_latipinna
ENSCING00000020531	-	100	82.051	ENSPMEG00000020585	polr2j	100	82.051	Poecilia_mexicana
ENSCING00000020531	-	100	82.051	ENSPREG00000015255	polr2j	100	82.051	Poecilia_reticulata
ENSCING00000020531	-	100	81.197	ENSPCOG00000024573	-	100	81.197	Propithecus_coquereli
ENSCING00000020531	-	99	78.448	ENSPVAG00000017770	-	66	78.448	Pteropus_vampyrus
ENSCING00000020531	-	100	82.051	ENSPNYG00000014832	polr2j	100	82.051	Pundamilia_nyererei
ENSCING00000020531	-	100	83.761	ENSPNAG00000016595	polr2j	100	83.761	Pygocentrus_nattereri
ENSCING00000020531	-	100	81.197	ENSRNOG00000001430	Polr2j	100	81.197	Rattus_norvegicus
ENSCING00000020531	-	100	81.197	ENSSBOG00000025579	-	100	81.197	Saimiri_boliviensis_boliviensis
ENSCING00000020531	-	59	82.609	ENSSHAG00000010443	-	81	82.609	Sarcophilus_harrisii
ENSCING00000020531	-	93	83.486	ENSSFOG00015003371	polr2j	83	83.486	Scleropages_formosus
ENSCING00000020531	-	100	82.051	ENSSMAG00000006729	polr2j	100	82.051	Scophthalmus_maximus
ENSCING00000020531	-	100	82.051	ENSSDUG00000018490	polr2j	100	82.051	Seriola_dumerili
ENSCING00000020531	-	100	82.051	ENSSLDG00000022354	polr2j	100	82.051	Seriola_lalandi_dorsalis
ENSCING00000020531	-	100	81.197	ENSSPUG00000010802	-	100	81.197	Sphenodon_punctatus
ENSCING00000020531	-	100	82.051	ENSSPAG00000021953	polr2j	100	82.051	Stegastes_partitus
ENSCING00000020531	-	100	81.197	ENSSSCG00000007688	-	100	81.197	Sus_scrofa
ENSCING00000020531	-	100	66.667	ENSSSCG00000003703	-	83	66.667	Sus_scrofa
ENSCING00000020531	-	59	82.609	ENSTGUG00000004510	-	100	82.609	Taeniopygia_guttata
ENSCING00000020531	-	85	79.000	ENSTGUG00000004501	-	100	79.000	Taeniopygia_guttata
ENSCING00000020531	-	100	82.051	ENSTRUG00000020842	polr2j	100	82.051	Takifugu_rubripes
ENSCING00000020531	-	100	81.197	ENSTNIG00000002994	polr2j	100	81.197	Tetraodon_nigroviridis
ENSCING00000020531	-	91	72.642	ENSTBEG00000005797	-	70	72.642	Tupaia_belangeri
ENSCING00000020531	-	100	81.197	ENSUAMG00000011310	-	100	81.197	Ursus_americanus
ENSCING00000020531	-	100	81.197	ENSUMAG00000012594	-	100	81.197	Ursus_maritimus
ENSCING00000020531	-	100	81.197	ENSXETG00000001108	polr2j	100	81.197	Xenopus_tropicalis
ENSCING00000020531	-	100	82.051	ENSXMAG00000012422	polr2j	100	82.051	Xiphophorus_maculatus