EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020618 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2222 bases
Position: chrHT000075.1:89166-91387
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000006383	zf-C2H2	PF00096.26	4e-51	1	10
ENSCINP00000006383	zf-C2H2	PF00096.26	4e-51	2	10
ENSCINP00000006383	zf-C2H2	PF00096.26	4e-51	3	10
ENSCINP00000006383	zf-C2H2	PF00096.26	4e-51	4	10
ENSCINP00000006383	zf-C2H2	PF00096.26	4e-51	5	10
ENSCINP00000006383	zf-C2H2	PF00096.26	4e-51	6	10
ENSCINP00000006383	zf-C2H2	PF00096.26	4e-51	7	10
ENSCINP00000006383	zf-C2H2	PF00096.26	4e-51	8	10
ENSCINP00000006383	zf-C2H2	PF00096.26	4e-51	9	10
ENSCINP00000006383	zf-C2H2	PF00096.26	4e-51	10	10
ENSCINP00000006383	zf-met	PF12874.7	5.1e-22	1	4
ENSCINP00000006383	zf-met	PF12874.7	5.1e-22	2	4
ENSCINP00000006383	zf-met	PF12874.7	5.1e-22	3	4
ENSCINP00000006383	zf-met	PF12874.7	5.1e-22	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000006383	-	987	-	ENSCINP00000006383	329 (aa)	-	F6R6Q8

Gene Model

Click here to download ENSCING00000020618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020618	-	97	43.522	ENSATEG00000003344	-	71	43.189	Anabas_testudineus
ENSCING00000020618	-	98	42.857	ENSACLG00000019270	-	80	42.857	Astatotilapia_calliptera
ENSCING00000020618	-	97	42.193	ENSACLG00000011642	-	91	41.121	Astatotilapia_calliptera
ENSCING00000020618	-	100	51.316	ENSCING00000003072	-	100	51.316	Ciona_intestinalis
ENSCING00000020618	-	98	49.007	ENSCING00000000609	-	99	48.923	Ciona_intestinalis
ENSCING00000020618	-	91	47.651	ENSDARG00000110710	CU210890.1	93	47.651	Danio_rerio
ENSCING00000020618	-	98	46.237	ENSDNOG00000045100	-	97	46.237	Dasypus_novemcinctus
ENSCING00000020618	-	95	41.722	ENSEBUG00000015155	-	76	41.722	Eptatretus_burgeri
ENSCING00000020618	-	94	44.538	ENSEBUG00000015661	-	75	44.538	Eptatretus_burgeri
ENSCING00000020618	-	94	37.015	ENSEBUG00000013392	-	58	39.194	Eptatretus_burgeri
ENSCING00000020618	-	92	46.875	ENSIPUG00000007934	-	93	46.875	Ictalurus_punctatus
ENSCING00000020618	-	91	45.498	ENSIPUG00000005581	-	71	45.498	Ictalurus_punctatus
ENSCING00000020618	-	99	45.098	MGP_CAROLIEiJ_G0015655	-	80	45.098	Mus_caroli
ENSCING00000020618	-	91	46.405	ENSSLDG00000006217	-	77	46.405	Seriola_lalandi_dorsalis
ENSCING00000020618	-	91	46.405	ENSSLDG00000005868	-	79	46.405	Seriola_lalandi_dorsalis