EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020631 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 777 bases
Position: chr5:3372757-3373533
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000031593	RRM_1	PF00076.22	1.4e-29	1	2
ENSCINP00000031593	RRM_1	PF00076.22	1.4e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000033636	-	729	-	ENSCINP00000031593	243 (aa)	-	H2XPK9

Gene Model

Click here to download ENSCING00000020631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020631's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020631	-	90	52.344	ENSG00000116350	SRSF4	67	61.290	Homo_sapiens
ENSCING00000020631	-	79	54.974	ENSAPOG00000023399	-	59	52.880	Acanthochromis_polyacanthus
ENSCING00000020631	-	80	56.923	ENSACIG00000018649	srsf4	89	58.394	Amphilophus_citrinellus
ENSCING00000020631	-	72	56.250	ENSAOCG00000005997	srsf4	90	57.386	Amphiprion_ocellaris
ENSCING00000020631	-	98	49.091	ENSATEG00000005680	srsf4	62	57.868	Anabas_testudineus
ENSCING00000020631	-	79	57.292	ENSACLG00000021269	-	50	54.872	Astatotilapia_calliptera
ENSCING00000020631	-	80	62.564	ENSACLG00000003395	srsf4	67	68.293	Astatotilapia_calliptera
ENSCING00000020631	-	80	59.487	ENSAMXG00000034811	srsf4	79	64.198	Astyanax_mexicanus
ENSCING00000020631	-	80	46.798	WBGene00004698	rsp-1	97	44.521	Caenorhabditis_elegans
ENSCING00000020631	-	96	57.872	ENSCHIG00000022096	SRSF4	53	54.661	Capra_hircus
ENSCING00000020631	-	80	61.735	ENSCING00000024718	-	57	63.131	Ciona_intestinalis
ENSCING00000020631	-	80	66.169	ENSCING00000012370	-	69	66.169	Ciona_intestinalis
ENSCING00000020631	-	77	48.936	ENSCING00000011362	-	65	48.223	Ciona_intestinalis
ENSCING00000020631	-	80	63.131	ENSCSAVG00000002581	-	71	61.809	Ciona_savignyi
ENSCING00000020631	-	80	63.077	ENSCSEG00000010058	srsf4	75	58.394	Cynoglossus_semilaevis
ENSCING00000020631	-	80	57.436	ENSDARG00000105293	srsf4	74	64.103	Danio_rerio
ENSCING00000020631	-	80	59.278	FBgn0004587	B52	97	55.396	Drosophila_melanogaster
ENSCING00000020631	-	72	44.318	ENSEBUG00000003129	srsf4	65	44.848	Eptatretus_burgeri
ENSCING00000020631	-	90	47.511	ENSEBUG00000001681	srsf4	67	48.168	Eptatretus_burgeri
ENSCING00000020631	-	98	49.425	ENSELUG00000017551	srsf4	92	57.246	Esox_lucius
ENSCING00000020631	-	79	62.176	ENSFHEG00000007472	srsf4	87	69.512	Fundulus_heteroclitus
ENSCING00000020631	-	79	57.513	ENSGMOG00000012906	srsf4	56	57.071	Gadus_morhua
ENSCING00000020631	-	80	61.538	ENSGAFG00000018496	srsf4	65	53.608	Gambusia_affinis
ENSCING00000020631	-	80	60.000	ENSGACG00000002389	srsf4	55	58.081	Gasterosteus_aculeatus
ENSCING00000020631	-	79	57.292	ENSHBUG00000011326	-	50	54.872	Haplochromis_burtoni
ENSCING00000020631	-	81	60.101	ENSHCOG00000012540	srsf4	68	59.794	Hippocampus_comes
ENSCING00000020631	-	80	60.513	ENSKMAG00000013631	srsf4	81	51.802	Kryptolebias_marmoratus
ENSCING00000020631	-	79	62.694	ENSMAMG00000004888	srsf4	70	59.124	Mastacembelus_armatus
ENSCING00000020631	-	80	62.564	ENSMZEG00005026275	srsf4	67	68.293	Maylandia_zebra
ENSCING00000020631	-	81	60.406	ENSMMOG00000013653	srsf4	65	55.670	Mola_mola
ENSCING00000020631	-	79	61.340	ENSMODG00000011052	SRSF4	55	57.653	Monodelphis_domestica
ENSCING00000020631	-	80	61.856	ENSMALG00000013392	srsf4	66	59.278	Monopterus_albus
ENSCING00000020631	-	79	52.083	ENSNLEG00000030787	-	61	51.562	Nomascus_leucogenys
ENSCING00000020631	-	54	44.366	ENSORLG00000009430	-	54	45.588	Oryzias_latipes
ENSCING00000020631	-	81	58.163	ENSORLG00020016052	srsf4	66	59.278	Oryzias_latipes_hni
ENSCING00000020631	-	99	55.000	ENSORLG00015007566	srsf4	70	59.278	Oryzias_latipes_hsok
ENSCING00000020631	-	81	58.163	ENSOMEG00000005541	srsf4	51	59.278	Oryzias_melastigma
ENSCING00000020631	-	80	59.000	ENSPMGG00000013436	srsf4	94	58.394	Periophthalmus_magnuspinnatus
ENSCING00000020631	-	79	51.309	ENSPMAG00000009397	srsf4	67	48.731	Petromyzon_marinus
ENSCING00000020631	-	80	61.538	ENSPLAG00000008812	srsf4	63	53.886	Poecilia_latipinna
ENSCING00000020631	-	79	61.658	ENSPMEG00000023638	srsf4	52	59.585	Poecilia_mexicana
ENSCING00000020631	-	80	61.538	ENSPREG00000009639	srsf4	50	59.585	Poecilia_reticulata
ENSCING00000020631	-	80	57.949	ENSPNYG00000003796	srsf4	56	58.763	Pundamilia_nyererei
ENSCING00000020631	-	79	61.257	ENSPNAG00000023844	srsf4	53	57.216	Pygocentrus_nattereri
ENSCING00000020631	-	81	59.391	ENSSFOG00015020292	srsf4	74	68.750	Scleropages_formosus
ENSCING00000020631	-	81	60.204	ENSSMAG00000001707	srsf4	50	59.794	Scophthalmus_maximus
ENSCING00000020631	-	80	57.949	ENSSDUG00000007387	srsf4	54	59.184	Seriola_dumerili
ENSCING00000020631	-	80	51.282	ENSSLDG00000009745	srsf4	61	50.000	Seriola_lalandi_dorsalis
ENSCING00000020631	-	90	54.661	ENSSPAG00000014538	srsf4	73	69.136	Stegastes_partitus
ENSCING00000020631	-	81	58.163	ENSTRUG00000011891	srsf4	62	59.391	Takifugu_rubripes
ENSCING00000020631	-	80	61.026	ENSXCOG00000018826	srsf4	89	57.252	Xiphophorus_couchianus
ENSCING00000020631	-	82	53.266	ENSXCOG00000003212	-	59	51.869	Xiphophorus_couchianus