EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020658 (Gene tree)
Gene ID: 100181824
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 5600 bases
Position: chr11:3695179-3700778
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000036023	AARP2CN	PF08142.12	1.6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000034394	-	2397	-	ENSCINP00000036023	784 (aa)	-	H2Y288

Gene Model

Click here to download ENSCING00000020658's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020658's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020658	-	99	46.164	ENSG00000167721	TSR1	97	46.599	Homo_sapiens
ENSCING00000020658	-	99	44.458	ENSAPOG00000020891	tsr1	96	45.000	Acanthochromis_polyacanthus
ENSCING00000020658	-	99	45.297	ENSAMEG00000007599	TSR1	96	45.297	Ailuropoda_melanoleuca
ENSCING00000020658	-	99	44.221	ENSACIG00000007090	tsr1	96	44.221	Amphilophus_citrinellus
ENSCING00000020658	-	99	43.941	ENSAOCG00000023284	tsr1	96	44.743	Amphiprion_ocellaris
ENSCING00000020658	-	93	43.247	ENSAPEG00000008452	tsr1	97	43.969	Amphiprion_percula
ENSCING00000020658	-	99	43.917	ENSATEG00000021961	tsr1	96	44.282	Anabas_testudineus
ENSCING00000020658	-	91	47.418	ENSAPLG00000013422	TSR1	97	48.027	Anas_platyrhynchos
ENSCING00000020658	-	71	36.145	ENSACAG00000000859	TSR1	92	37.265	Anolis_carolinensis
ENSCING00000020658	-	99	46.918	ENSANAG00000031071	TSR1	97	47.236	Aotus_nancymaae
ENSCING00000020658	-	99	43.842	ENSACLG00000007595	tsr1	96	44.568	Astatotilapia_calliptera
ENSCING00000020658	-	52	39.007	ENSAMXG00000008470	tsr1	93	38.512	Astyanax_mexicanus
ENSCING00000020658	-	99	46.550	ENSBTAG00000004225	TSR1	97	47.051	Bos_taurus
ENSCING00000020658	-	99	37.781	WBGene00006497	tag-151	96	38.184	Caenorhabditis_elegans
ENSCING00000020658	-	99	46.154	ENSCJAG00000012456	TSR1	97	46.474	Callithrix_jacchus
ENSCING00000020658	-	99	46.384	ENSCAFG00000002106	-	97	46.299	Canis_familiaris
ENSCING00000020658	-	92	43.683	ENSCAFG00000019273	-	97	47.840	Canis_familiaris
ENSCING00000020658	-	99	46.269	ENSCAFG00020009728	TSR1	97	46.183	Canis_lupus_dingo
ENSCING00000020658	-	99	46.096	ENSCHIG00000023935	TSR1	97	46.599	Capra_hircus
ENSCING00000020658	-	99	45.397	ENSTSYG00000005468	TSR1	97	45.592	Carlito_syrichta
ENSCING00000020658	-	94	43.931	ENSCPOG00000014833	TSR1	99	44.299	Cavia_porcellus
ENSCING00000020658	-	96	44.778	ENSCCAG00000028962	TSR1	98	45.111	Cebus_capucinus
ENSCING00000020658	-	99	45.603	ENSCATG00000044262	TSR1	97	45.786	Cercocebus_atys
ENSCING00000020658	-	99	46.280	ENSCLAG00000005567	TSR1	97	46.532	Chinchilla_lanigera
ENSCING00000020658	-	99	45.603	ENSCSAG00000013788	TSR1	97	45.786	Chlorocebus_sabaeus
ENSCING00000020658	-	98	46.280	ENSCPBG00000020363	TSR1	94	46.633	Chrysemys_picta_bellii
ENSCING00000020658	-	99	69.434	ENSCSAVG00000001875	-	100	68.844	Ciona_savignyi
ENSCING00000020658	-	99	43.750	ENSCANG00000033056	TSR1	97	43.750	Colobus_angolensis_palliatus
ENSCING00000020658	-	99	45.283	ENSCGRG00001023942	Tsr1	97	46.038	Cricetulus_griseus_chok1gshd
ENSCING00000020658	-	99	42.839	ENSCGRG00000013015	Tsr1	97	43.219	Cricetulus_griseus_crigri
ENSCING00000020658	-	99	44.212	ENSCSEG00000013009	tsr1	96	44.951	Cynoglossus_semilaevis
ENSCING00000020658	-	99	44.704	ENSCVAG00000000506	tsr1	96	45.387	Cyprinodon_variegatus
ENSCING00000020658	-	99	44.099	ENSDARG00000007744	tsr1	96	44.472	Danio_rerio
ENSCING00000020658	-	99	46.299	ENSDNOG00000004715	TSR1	96	47.761	Dasypus_novemcinctus
ENSCING00000020658	-	98	41.335	ENSDORG00000023234	-	99	41.313	Dipodomys_ordii
ENSCING00000020658	-	99	45.466	ENSDORG00000016371	-	97	46.038	Dipodomys_ordii
ENSCING00000020658	-	99	39.583	FBgn0037073	Tsr1	96	40.074	Drosophila_melanogaster
ENSCING00000020658	-	89	61.189	ENSETEG00000017534	TSR1	89	61.189	Echinops_telfairi
ENSCING00000020658	-	96	46.675	ENSEBUG00000013731	TSR1	96	46.803	Eptatretus_burgeri
ENSCING00000020658	-	99	46.550	ENSEASG00005009302	TSR1	95	46.675	Equus_asinus_asinus
ENSCING00000020658	-	99	46.442	ENSECAG00000009114	TSR1	97	46.509	Equus_caballus
ENSCING00000020658	-	99	43.452	ENSELUG00000020984	tsr1	93	43.574	Esox_lucius
ENSCING00000020658	-	99	46.801	ENSFCAG00000006313	TSR1	97	46.801	Felis_catus
ENSCING00000020658	-	100	46.040	ENSFALG00000006532	TSR1	97	46.163	Ficedula_albicollis
ENSCING00000020658	-	99	46.541	ENSFDAG00000006038	TSR1	97	46.792	Fukomys_damarensis
ENSCING00000020658	-	99	43.682	ENSFHEG00000003626	tsr1	96	44.351	Fundulus_heteroclitus
ENSCING00000020658	-	99	44.862	ENSGMOG00000010336	tsr1	96	45.500	Gadus_morhua
ENSCING00000020658	-	99	44.975	ENSGAFG00000012993	tsr1	96	45.466	Gambusia_affinis
ENSCING00000020658	-	99	44.472	ENSGACG00000010843	tsr1	96	45.105	Gasterosteus_aculeatus
ENSCING00000020658	-	98	46.397	ENSGAGG00000025619	-	97	46.867	Gopherus_agassizii
ENSCING00000020658	-	99	45.891	ENSGGOG00000001704	TSR1	97	46.348	Gorilla_gorilla
ENSCING00000020658	-	99	43.788	ENSHBUG00000017904	tsr1	97	43.734	Haplochromis_burtoni
ENSCING00000020658	-	93	40.940	ENSHGLG00000015688	-	97	40.693	Heterocephalus_glaber_female
ENSCING00000020658	-	99	46.096	ENSHGLG00000012806	-	97	46.222	Heterocephalus_glaber_female
ENSCING00000020658	-	99	46.096	ENSHGLG00100015392	TSR1	97	46.222	Heterocephalus_glaber_male
ENSCING00000020658	-	100	44.458	ENSHCOG00000001432	tsr1	97	44.969	Hippocampus_comes
ENSCING00000020658	-	99	44.485	ENSIPUG00000004618	tsr1	96	45.244	Ictalurus_punctatus
ENSCING00000020658	-	99	46.617	ENSSTOG00000011819	TSR1	97	46.742	Ictidomys_tridecemlineatus
ENSCING00000020658	-	91	44.884	ENSJJAG00000019505	Tsr1	93	44.475	Jaculus_jaculus
ENSCING00000020658	-	99	44.540	ENSKMAG00000005763	tsr1	96	45.644	Kryptolebias_marmoratus
ENSCING00000020658	-	99	43.932	ENSLBEG00000021823	tsr1	96	44.606	Labrus_bergylta
ENSCING00000020658	-	99	47.329	ENSLACG00000002197	TSR1	97	47.643	Latimeria_chalumnae
ENSCING00000020658	-	90	49.231	ENSLOCG00000006491	TSR1	95	49.231	Lepisosteus_oculatus
ENSCING00000020658	-	99	45.729	ENSMFAG00000021330	TSR1	97	45.912	Macaca_fascicularis
ENSCING00000020658	-	99	45.729	ENSMMUG00000017519	TSR1	97	45.912	Macaca_mulatta
ENSCING00000020658	-	99	45.980	ENSMNEG00000031382	TSR1	97	46.164	Macaca_nemestrina
ENSCING00000020658	-	99	45.477	ENSMLEG00000036733	TSR1	97	45.660	Mandrillus_leucophaeus
ENSCING00000020658	-	99	43.689	ENSMAMG00000017918	tsr1	96	44.053	Mastacembelus_armatus
ENSCING00000020658	-	99	43.849	ENSMZEG00005007477	tsr1	96	44.540	Maylandia_zebra
ENSCING00000020658	-	100	47.212	ENSMGAG00000005576	TSR1	98	47.088	Meleagris_gallopavo
ENSCING00000020658	-	99	46.675	ENSMICG00000012943	TSR1	97	46.742	Microcebus_murinus
ENSCING00000020658	-	99	45.854	ENSMOCG00000022764	Tsr1	97	46.106	Microtus_ochrogaster
ENSCING00000020658	-	99	44.103	ENSMMOG00000014280	tsr1	96	44.747	Mola_mola
ENSCING00000020658	-	99	47.541	ENSMODG00000010658	TSR1	97	47.541	Monodelphis_domestica
ENSCING00000020658	-	99	43.712	ENSMALG00000011681	tsr1	96	44.322	Monopterus_albus
ENSCING00000020658	-	99	45.076	MGP_CAROLIEiJ_G0016727	Tsr1	97	45.076	Mus_caroli
ENSCING00000020658	-	99	45.455	ENSMUSG00000038335	Tsr1	97	45.455	Mus_musculus
ENSCING00000020658	-	99	45.190	MGP_PahariEiJ_G0017864	Tsr1	97	45.190	Mus_pahari
ENSCING00000020658	-	99	45.455	MGP_SPRETEiJ_G0017570	Tsr1	97	45.455	Mus_spretus
ENSCING00000020658	-	80	47.450	ENSMPUG00000013000	TSR1	97	48.142	Mustela_putorius_furo
ENSCING00000020658	-	99	46.424	ENSMLUG00000003505	TSR1	97	46.357	Myotis_lucifugus
ENSCING00000020658	-	99	43.415	ENSNBRG00000020728	tsr1	96	44.308	Neolamprologus_brichardi
ENSCING00000020658	-	99	42.602	ENSNLEG00000017184	TSR1	97	43.583	Nomascus_leucogenys
ENSCING00000020658	-	99	42.191	ENSMEUG00000015828	TSR1	97	43.145	Notamacropus_eugenii
ENSCING00000020658	-	99	44.772	ENSONIG00000013131	tsr1	96	44.772	Oreochromis_niloticus
ENSCING00000020658	-	96	43.995	ENSOANG00000008637	TSR1	97	43.995	Ornithorhynchus_anatinus
ENSCING00000020658	-	99	47.434	ENSOCUG00000014256	TSR1	97	47.625	Oryctolagus_cuniculus
ENSCING00000020658	-	99	44.240	ENSORLG00000004926	tsr1	96	45.031	Oryzias_latipes
ENSCING00000020658	-	99	44.294	ENSORLG00020008792	tsr1	96	44.840	Oryzias_latipes_hni
ENSCING00000020658	-	99	44.240	ENSORLG00015013838	tsr1	96	45.031	Oryzias_latipes_hsok
ENSCING00000020658	-	99	44.608	ENSOMEG00000004830	tsr1	96	45.466	Oryzias_melastigma
ENSCING00000020658	-	99	46.567	ENSOGAG00000004492	TSR1	97	47.453	Otolemur_garnettii
ENSCING00000020658	-	99	46.222	ENSOARG00000015437	TSR1	95	46.725	Ovis_aries
ENSCING00000020658	-	99	46.038	ENSPPAG00000036355	TSR1	97	46.474	Pan_paniscus
ENSCING00000020658	-	99	46.675	ENSPPRG00000015519	-	97	46.675	Panthera_pardus
ENSCING00000020658	-	99	46.801	ENSPTIG00000010608	TSR1	97	46.801	Panthera_tigris_altaica
ENSCING00000020658	-	99	46.038	ENSPTRG00000008547	TSR1	97	46.474	Pan_troglodytes
ENSCING00000020658	-	99	44.472	ENSPANG00000024463	TSR1	97	44.906	Papio_anubis
ENSCING00000020658	-	99	45.997	ENSPKIG00000013972	tsr1	96	46.261	Paramormyrops_kingsleyae
ENSCING00000020658	-	86	47.475	ENSPSIG00000018258	TSR1	96	48.132	Pelodiscus_sinensis
ENSCING00000020658	-	99	46.532	ENSPMGG00000011577	tsr1	96	46.348	Periophthalmus_magnuspinnatus
ENSCING00000020658	-	99	45.340	ENSPEMG00000018033	Tsr1	97	45.181	Peromyscus_maniculatus_bairdii
ENSCING00000020658	-	99	46.299	ENSPCIG00000009357	TSR1	95	46.424	Phascolarctos_cinereus
ENSCING00000020658	-	99	45.499	ENSPFOG00000004483	TSR1	96	46.022	Poecilia_formosa
ENSCING00000020658	-	99	45.990	ENSPLAG00000022320	tsr1	96	45.990	Poecilia_latipinna
ENSCING00000020658	-	99	45.067	ENSPMEG00000004577	tsr1	96	45.345	Poecilia_mexicana
ENSCING00000020658	-	99	44.553	ENSPREG00000010354	tsr1	94	45.322	Poecilia_reticulata
ENSCING00000020658	-	99	42.910	ENSPPYG00000007792	TSR1	97	43.088	Pongo_abelii
ENSCING00000020658	-	99	45.776	ENSPCOG00000017928	TSR1	97	46.038	Propithecus_coquereli
ENSCING00000020658	-	99	46.106	ENSPVAG00000002162	TSR1	97	46.357	Pteropus_vampyrus
ENSCING00000020658	-	99	43.966	ENSPNYG00000016163	tsr1	96	44.691	Pundamilia_nyererei
ENSCING00000020658	-	99	44.756	ENSPNAG00000008659	tsr1	96	44.957	Pygocentrus_nattereri
ENSCING00000020658	-	99	45.250	ENSRNOG00000002980	Tsr1	97	45.786	Rattus_norvegicus
ENSCING00000020658	-	99	45.912	ENSRBIG00000040016	TSR1	97	46.038	Rhinopithecus_bieti
ENSCING00000020658	-	99	45.912	ENSRROG00000030361	TSR1	97	46.038	Rhinopithecus_roxellana
ENSCING00000020658	-	99	46.456	ENSSBOG00000020785	TSR1	97	46.784	Saimiri_boliviensis_boliviensis
ENSCING00000020658	-	99	46.816	ENSSHAG00000011394	TSR1	97	47.302	Sarcophilus_harrisii
ENSCING00000020658	-	99	46.486	ENSSFOG00015005455	tsr1	96	46.211	Scleropages_formosus
ENSCING00000020658	-	99	43.834	ENSSMAG00000009504	tsr1	96	43.956	Scophthalmus_maximus
ENSCING00000020658	-	100	43.976	ENSSDUG00000012074	tsr1	97	44.284	Seriola_dumerili
ENSCING00000020658	-	100	43.932	ENSSLDG00000002031	tsr1	97	44.284	Seriola_lalandi_dorsalis
ENSCING00000020658	-	92	47.414	ENSSARG00000000759	TSR1	90	47.414	Sorex_araneus
ENSCING00000020658	-	100	45.161	ENSSPUG00000007042	TSR1	98	45.916	Sphenodon_punctatus
ENSCING00000020658	-	99	44.756	ENSSPAG00000021951	tsr1	96	44.756	Stegastes_partitus
ENSCING00000020658	-	99	46.482	ENSSSCG00000038534	TSR1	97	47.051	Sus_scrofa
ENSCING00000020658	-	91	46.259	ENSTGUG00000005883	TSR1	99	46.467	Taeniopygia_guttata
ENSCING00000020658	-	99	45.006	ENSTRUG00000004665	tsr1	96	45.253	Takifugu_rubripes
ENSCING00000020658	-	99	45.363	ENSTNIG00000016196	tsr1	97	45.865	Tetraodon_nigroviridis
ENSCING00000020658	-	65	70.370	ENSTBEG00000015275	-	64	70.370	Tupaia_belangeri
ENSCING00000020658	-	99	46.608	ENSTTRG00000001177	TSR1	97	47.103	Tursiops_truncatus
ENSCING00000020658	-	99	46.212	ENSUAMG00000025160	TSR1	97	46.154	Ursus_americanus
ENSCING00000020658	-	96	45.288	ENSUMAG00000009294	TSR1	96	45.763	Ursus_maritimus
ENSCING00000020658	-	85	40.588	ENSVPAG00000000228	TSR1	99	41.116	Vicugna_pacos
ENSCING00000020658	-	99	46.384	ENSVVUG00000021767	TSR1	97	46.299	Vulpes_vulpes
ENSCING00000020658	-	99	42.105	ENSXETG00000023797	tsr1	96	42.356	Xenopus_tropicalis
ENSCING00000020658	-	99	45.217	ENSXCOG00000009635	tsr1	96	45.533	Xiphophorus_couchianus
ENSCING00000020658	-	99	44.485	ENSXMAG00000001397	tsr1	93	45.387	Xiphophorus_maculatus