EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020677 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1065 bases
Position: chr10:2442560-2443624
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000029821	TGT	PF01702.18	2.3e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031661	-	1008	-	ENSCINP00000029821	336 (aa)	-	H2XJI9

Gene Model

Click here to download ENSCING00000020677's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020677's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020677	-	100	33.065	ENSG00000151576	QTRT2	93	33.788	Homo_sapiens
ENSCING00000020677	-	100	34.595	ENSAPOG00000001940	qtrt2	84	34.595	Acanthochromis_polyacanthus
ENSCING00000020677	-	100	32.796	ENSAMEG00000005349	-	85	32.796	Ailuropoda_melanoleuca
ENSCING00000020677	-	73	32.258	ENSAMEG00000017447	-	83	32.258	Ailuropoda_melanoleuca
ENSCING00000020677	-	100	35.043	ENSACIG00000021458	qtrt2	84	35.043	Amphilophus_citrinellus
ENSCING00000020677	-	100	34.807	ENSAOCG00000008581	qtrt2	86	34.807	Amphiprion_ocellaris
ENSCING00000020677	-	100	34.807	ENSAPEG00000019285	qtrt2	86	34.807	Amphiprion_percula
ENSCING00000020677	-	100	35.754	ENSATEG00000009688	qtrt2	85	35.754	Anabas_testudineus
ENSCING00000020677	-	99	33.784	ENSAPLG00000001359	QTRT2	88	33.784	Anas_platyrhynchos
ENSCING00000020677	-	100	32.533	ENSACAG00000009920	QTRT2	85	32.533	Anolis_carolinensis
ENSCING00000020677	-	100	32.796	ENSANAG00000028433	QTRT2	87	32.796	Aotus_nancymaae
ENSCING00000020677	-	100	32.447	ENSACLG00000026851	qtrt2	85	32.447	Astatotilapia_calliptera
ENSCING00000020677	-	100	33.244	ENSAMXG00000038440	qtrt2	88	33.244	Astyanax_mexicanus
ENSCING00000020677	-	100	33.065	ENSBTAG00000004977	QTRT2	87	33.065	Bos_taurus
ENSCING00000020677	-	100	32.796	ENSCJAG00000009294	QTRT2	88	34.810	Callithrix_jacchus
ENSCING00000020677	-	100	32.796	ENSCAFG00000010759	QTRT2	87	32.796	Canis_familiaris
ENSCING00000020677	-	100	32.796	ENSCAFG00020006930	QTRT2	87	32.796	Canis_lupus_dingo
ENSCING00000020677	-	100	33.693	ENSCHIG00000016908	QTRT2	87	33.693	Capra_hircus
ENSCING00000020677	-	100	33.871	ENSTSYG00000001882	QTRT2	87	33.871	Carlito_syrichta
ENSCING00000020677	-	56	33.032	ENSCAPG00000007379	QTRT2	67	33.032	Cavia_aperea
ENSCING00000020677	-	100	33.333	ENSCPOG00000013988	QTRT2	87	33.333	Cavia_porcellus
ENSCING00000020677	-	100	32.527	ENSCCAG00000025622	QTRT2	87	32.527	Cebus_capucinus
ENSCING00000020677	-	100	32.527	ENSCATG00000035474	QTRT2	93	33.447	Cercocebus_atys
ENSCING00000020677	-	100	31.989	ENSCLAG00000012056	QTRT2	87	31.989	Chinchilla_lanigera
ENSCING00000020677	-	100	32.527	ENSCSAG00000006914	QTRT2	87	32.527	Chlorocebus_sabaeus
ENSCING00000020677	-	93	30.286	ENSCHOG00000004763	QTRT2	90	30.286	Choloepus_hoffmanni
ENSCING00000020677	-	100	33.154	ENSCPBG00000003124	QTRT2	87	33.154	Chrysemys_picta_bellii
ENSCING00000020677	-	100	32.796	ENSCANG00000040661	QTRT2	93	33.447	Colobus_angolensis_palliatus
ENSCING00000020677	-	56	32.127	ENSCGRG00001019383	Qtrt2	62	32.127	Cricetulus_griseus_chok1gshd
ENSCING00000020677	-	100	32.258	ENSCGRG00000006970	Qtrt2	87	32.258	Cricetulus_griseus_crigri
ENSCING00000020677	-	100	32.804	ENSCSEG00000017068	qtrt2	85	32.804	Cynoglossus_semilaevis
ENSCING00000020677	-	100	32.337	ENSCVAG00000005581	qtrt2	85	32.337	Cyprinodon_variegatus
ENSCING00000020677	-	100	32.884	ENSDARG00000016093	qtrt2	87	32.884	Danio_rerio
ENSCING00000020677	-	78	32.197	ENSDNOG00000031370	QTRT2	71	32.197	Dasypus_novemcinctus
ENSCING00000020677	-	100	31.183	ENSDORG00000004310	Qtrt2	87	31.183	Dipodomys_ordii
ENSCING00000020677	-	100	30.831	ENSETEG00000018508	QTRT2	87	30.831	Echinops_telfairi
ENSCING00000020677	-	100	31.989	ENSEASG00005012420	QTRT2	87	31.989	Equus_asinus_asinus
ENSCING00000020677	-	100	31.989	ENSECAG00000002091	QTRT2	83	31.989	Equus_caballus
ENSCING00000020677	-	60	44.681	ENSEEUG00000012169	-	72	44.681	Erinaceus_europaeus
ENSCING00000020677	-	100	31.378	ENSELUG00000013496	qtrt2	87	31.378	Esox_lucius
ENSCING00000020677	-	100	32.796	ENSFCAG00000027207	QTRT2	87	32.796	Felis_catus
ENSCING00000020677	-	100	33.693	ENSFALG00000006002	QTRT2	87	33.693	Ficedula_albicollis
ENSCING00000020677	-	100	30.749	ENSFDAG00000015038	QTRT2	84	30.966	Fukomys_damarensis
ENSCING00000020677	-	100	32.609	ENSFHEG00000017445	qtrt2	85	32.609	Fundulus_heteroclitus
ENSCING00000020677	-	100	31.635	ENSGMOG00000015771	qtrt2	88	31.481	Gadus_morhua
ENSCING00000020677	-	100	33.780	ENSGALG00000037485	QTRT2	85	33.780	Gallus_gallus
ENSCING00000020677	-	100	32.609	ENSGAFG00000007550	qtrt2	85	32.609	Gambusia_affinis
ENSCING00000020677	-	100	34.232	ENSGACG00000003260	qtrt2	86	34.232	Gasterosteus_aculeatus
ENSCING00000020677	-	78	33.080	ENSGAGG00000010771	QTRT2	75	33.080	Gopherus_agassizii
ENSCING00000020677	-	100	32.796	ENSGGOG00000011830	QTRT2	93	33.447	Gorilla_gorilla
ENSCING00000020677	-	100	32.181	ENSHBUG00000017045	qtrt2	84	32.181	Haplochromis_burtoni
ENSCING00000020677	-	56	31.674	ENSHGLG00000010705	-	62	31.674	Heterocephalus_glaber_female
ENSCING00000020677	-	56	31.674	ENSHGLG00100003163	-	62	31.674	Heterocephalus_glaber_male
ENSCING00000020677	-	100	33.880	ENSHCOG00000018359	qtrt2	85	33.880	Hippocampus_comes
ENSCING00000020677	-	100	31.903	ENSIPUG00000010893	qtrt2	81	31.903	Ictalurus_punctatus
ENSCING00000020677	-	100	32.796	ENSSTOG00000000303	QTRT2	87	32.796	Ictidomys_tridecemlineatus
ENSCING00000020677	-	100	33.889	ENSKMAG00000009788	qtrt2	85	33.889	Kryptolebias_marmoratus
ENSCING00000020677	-	100	34.574	ENSLBEG00000018687	qtrt2	85	34.574	Labrus_bergylta
ENSCING00000020677	-	78	32.824	ENSLACG00000008339	QTRT2	74	32.824	Latimeria_chalumnae
ENSCING00000020677	-	100	34.146	ENSLOCG00000003146	qtrt2	84	34.146	Lepisosteus_oculatus
ENSCING00000020677	-	56	32.127	ENSLAFG00000005036	QTRT2	63	32.127	Loxodonta_africana
ENSCING00000020677	-	100	32.258	ENSMFAG00000039762	QTRT2	93	33.447	Macaca_fascicularis
ENSCING00000020677	-	100	32.258	ENSMMUG00000001953	QTRT2	93	33.447	Macaca_mulatta
ENSCING00000020677	-	100	32.527	ENSMNEG00000029857	QTRT2	93	33.447	Macaca_nemestrina
ENSCING00000020677	-	100	32.527	ENSMLEG00000034589	QTRT2	93	33.447	Mandrillus_leucophaeus
ENSCING00000020677	-	100	33.777	ENSMAMG00000001620	qtrt2	84	33.777	Mastacembelus_armatus
ENSCING00000020677	-	100	32.447	ENSMZEG00005021955	qtrt2	84	32.447	Maylandia_zebra
ENSCING00000020677	-	86	35.802	ENSMGAG00000014322	QTRT2	89	35.802	Meleagris_gallopavo
ENSCING00000020677	-	100	32.258	ENSMAUG00000013256	Qtrt2	87	32.258	Mesocricetus_auratus
ENSCING00000020677	-	100	32.527	ENSMICG00000049101	QTRT2	87	32.527	Microcebus_murinus
ENSCING00000020677	-	100	31.989	ENSMOCG00000020315	Qtrt2	87	31.989	Microtus_ochrogaster
ENSCING00000020677	-	100	32.708	ENSMMOG00000002808	qtrt2	85	32.708	Mola_mola
ENSCING00000020677	-	100	31.806	ENSMODG00000018172	QTRT2	87	31.806	Monodelphis_domestica
ENSCING00000020677	-	100	34.133	ENSMALG00000021589	qtrt2	77	34.133	Monopterus_albus
ENSCING00000020677	-	100	31.720	MGP_CAROLIEiJ_G0020758	Qtrt2	87	31.720	Mus_caroli
ENSCING00000020677	-	56	31.390	ENSMUSG00000022704	Qtrt2	63	31.390	Mus_musculus
ENSCING00000020677	-	100	31.720	MGP_PahariEiJ_G0016458	Qtrt2	87	31.720	Mus_pahari
ENSCING00000020677	-	100	31.720	MGP_SPRETEiJ_G0021657	Qtrt2	87	31.720	Mus_spretus
ENSCING00000020677	-	100	32.258	ENSMPUG00000000279	QTRT2	87	32.258	Mustela_putorius_furo
ENSCING00000020677	-	100	33.333	ENSMLUG00000004733	QTRT2	87	33.333	Myotis_lucifugus
ENSCING00000020677	-	100	31.989	ENSNGAG00000023502	Qtrt2	87	31.989	Nannospalax_galili
ENSCING00000020677	-	82	36.275	ENSNBRG00000022845	qtrt2	76	36.275	Neolamprologus_brichardi
ENSCING00000020677	-	76	33.904	ENSNLEG00000035353	QTRT2	90	33.788	Nomascus_leucogenys
ENSCING00000020677	-	83	33.861	ENSMEUG00000004034	QTRT2	89	33.861	Notamacropus_eugenii
ENSCING00000020677	-	85	47.692	ENSOPRG00000014419	QTRT2	67	47.692	Ochotona_princeps
ENSCING00000020677	-	100	32.527	ENSODEG00000005189	-	87	32.527	Octodon_degus
ENSCING00000020677	-	100	31.720	ENSODEG00000001407	-	87	31.720	Octodon_degus
ENSCING00000020677	-	100	32.713	ENSONIG00000014074	qtrt2	87	32.713	Oreochromis_niloticus
ENSCING00000020677	-	100	31.989	ENSOANG00000002883	QTRT2	77	31.989	Ornithorhynchus_anatinus
ENSCING00000020677	-	100	31.452	ENSOCUG00000002603	QTRT2	87	31.452	Oryctolagus_cuniculus
ENSCING00000020677	-	100	34.501	ENSORLG00000009211	qtrt2	86	34.501	Oryzias_latipes
ENSCING00000020677	-	100	34.501	ENSORLG00020013554	qtrt2	86	34.501	Oryzias_latipes_hni
ENSCING00000020677	-	100	34.501	ENSORLG00015013318	qtrt2	84	34.501	Oryzias_latipes_hsok
ENSCING00000020677	-	100	34.667	ENSOMEG00000006725	qtrt2	86	34.667	Oryzias_melastigma
ENSCING00000020677	-	100	32.527	ENSOGAG00000015070	QTRT2	87	32.527	Otolemur_garnettii
ENSCING00000020677	-	100	33.065	ENSOARG00000019572	QTRT2	85	33.065	Ovis_aries
ENSCING00000020677	-	100	32.796	ENSPPAG00000039629	QTRT2	93	33.447	Pan_paniscus
ENSCING00000020677	-	100	32.796	ENSPPRG00000002158	QTRT2	87	32.796	Panthera_pardus
ENSCING00000020677	-	100	32.796	ENSPTIG00000009811	QTRT2	87	32.796	Panthera_tigris_altaica
ENSCING00000020677	-	100	32.796	ENSPTRG00000015240	QTRT2	93	33.447	Pan_troglodytes
ENSCING00000020677	-	100	32.527	ENSPANG00000006514	QTRT2	93	33.447	Papio_anubis
ENSCING00000020677	-	94	36.152	ENSPKIG00000013085	qtrt2	84	36.152	Paramormyrops_kingsleyae
ENSCING00000020677	-	100	33.693	ENSPSIG00000002503	QTRT2	84	33.693	Pelodiscus_sinensis
ENSCING00000020677	-	100	34.254	ENSPMGG00000023703	qtrt2	85	34.254	Periophthalmus_magnuspinnatus
ENSCING00000020677	-	100	31.452	ENSPEMG00000008488	Qtrt2	87	31.452	Peromyscus_maniculatus_bairdii
ENSCING00000020677	-	100	32.345	ENSPCIG00000019843	QTRT2	87	32.345	Phascolarctos_cinereus
ENSCING00000020677	-	100	33.060	ENSPFOG00000009940	qtrt2	86	32.787	Poecilia_formosa
ENSCING00000020677	-	99	32.877	ENSPLAG00000002496	qtrt2	85	32.877	Poecilia_latipinna
ENSCING00000020677	-	100	32.609	ENSPMEG00000016642	qtrt2	86	32.432	Poecilia_mexicana
ENSCING00000020677	-	100	33.152	ENSPREG00000018812	qtrt2	85	32.880	Poecilia_reticulata
ENSCING00000020677	-	100	33.065	ENSPPYG00000013531	QTRT2	85	33.065	Pongo_abelii
ENSCING00000020677	-	100	33.065	ENSPCOG00000020933	QTRT2	93	33.788	Propithecus_coquereli
ENSCING00000020677	-	100	33.065	ENSPVAG00000008515	QTRT2	87	33.065	Pteropus_vampyrus
ENSCING00000020677	-	94	31.161	ENSPNAG00000020484	qtrt2	86	31.161	Pygocentrus_nattereri
ENSCING00000020677	-	100	31.183	ENSRNOG00000060729	Qtrt2	87	31.183	Rattus_norvegicus
ENSCING00000020677	-	100	33.333	ENSRBIG00000039154	QTRT2	93	33.447	Rhinopithecus_bieti
ENSCING00000020677	-	100	32.796	ENSRROG00000034546	QTRT2	93	33.447	Rhinopithecus_roxellana
ENSCING00000020677	-	100	32.527	ENSSBOG00000024610	QTRT2	87	32.527	Saimiri_boliviensis_boliviensis
ENSCING00000020677	-	100	32.527	ENSSHAG00000006503	QTRT2	87	32.527	Sarcophilus_harrisii
ENSCING00000020677	-	82	34.211	ENSSFOG00015016750	qtrt2	83	33.028	Scleropages_formosus
ENSCING00000020677	-	100	34.167	ENSSMAG00000014011	qtrt2	87	33.423	Scophthalmus_maximus
ENSCING00000020677	-	100	34.807	ENSSDUG00000015365	qtrt2	84	34.807	Seriola_dumerili
ENSCING00000020677	-	100	33.693	ENSSLDG00000003543	qtrt2	84	33.693	Seriola_lalandi_dorsalis
ENSCING00000020677	-	86	33.645	ENSSPUG00000002159	QTRT2	88	33.645	Sphenodon_punctatus
ENSCING00000020677	-	100	35.593	ENSSPAG00000015433	qtrt2	84	35.593	Stegastes_partitus
ENSCING00000020677	-	100	33.065	ENSSSCG00000011912	QTRT2	87	33.065	Sus_scrofa
ENSCING00000020677	-	100	34.232	ENSTGUG00000013406	QTRT2	86	34.232	Taeniopygia_guttata
ENSCING00000020677	-	100	34.831	ENSTRUG00000000756	qtrt2	87	34.831	Takifugu_rubripes
ENSCING00000020677	-	100	32.800	ENSTNIG00000012725	qtrt2	85	32.800	Tetraodon_nigroviridis
ENSCING00000020677	-	78	35.333	ENSTBEG00000003357	QTRT2	70	35.333	Tupaia_belangeri
ENSCING00000020677	-	83	35.443	ENSTTRG00000000180	QTRT2	89	35.443	Tursiops_truncatus
ENSCING00000020677	-	83	34.810	ENSUAMG00000018473	QTRT2	81	34.810	Ursus_americanus
ENSCING00000020677	-	57	37.306	ENSUMAG00000025344	-	94	37.306	Ursus_maritimus
ENSCING00000020677	-	78	37.333	ENSVPAG00000011963	QTRT2	71	37.333	Vicugna_pacos
ENSCING00000020677	-	100	33.065	ENSVVUG00000022159	QTRT2	87	33.065	Vulpes_vulpes
ENSCING00000020677	-	100	32.425	ENSXCOG00000009508	qtrt2	84	32.425	Xiphophorus_couchianus
ENSCING00000020677	-	100	32.880	ENSXMAG00000010094	qtrt2	85	32.609	Xiphophorus_maculatus