EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020685 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2944 bases
Position: chr11:871073-874016
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000030376	tRNA_anti-codon	PF01336.25	3.1e-12	1	1
ENSCINP00000030376	tRNA-synt_2	PF00152.20	1.6e-92	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000037294	-	1782	-	ENSCINP00000030376	594 (aa)	-	H2XL44

Gene Model

Click here to download ENSCING00000020685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020685's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020685	-	100	47.533	ENSG00000117593	DARS2	93	47.533	Homo_sapiens
ENSCING00000020685	-	98	46.434	ENSAPOG00000023313	dars2	89	46.434	Acanthochromis_polyacanthus
ENSCING00000020685	-	99	46.569	ENSAMEG00000015617	DARS2	92	46.569	Ailuropoda_melanoleuca
ENSCING00000020685	-	98	46.520	ENSACIG00000001777	dars2	89	46.520	Amphilophus_citrinellus
ENSCING00000020685	-	98	46.555	ENSAOCG00000011976	dars2	84	46.555	Amphiprion_ocellaris
ENSCING00000020685	-	98	47.059	ENSAPEG00000007891	dars2	94	46.589	Amphiprion_percula
ENSCING00000020685	-	98	46.284	ENSATEG00000002262	dars2	89	46.284	Anabas_testudineus
ENSCING00000020685	-	98	45.364	ENSAPLG00000009344	DARS2	99	45.364	Anas_platyrhynchos
ENSCING00000020685	-	55	38.202	ENSACAG00000012231	NARS2	69	38.202	Anolis_carolinensis
ENSCING00000020685	-	98	46.192	ENSACAG00000015426	DARS2	93	46.192	Anolis_carolinensis
ENSCING00000020685	-	100	48.350	ENSANAG00000021693	DARS2	93	48.350	Aotus_nancymaae
ENSCING00000020685	-	98	46.064	ENSACLG00000002899	dars2	93	46.064	Astatotilapia_calliptera
ENSCING00000020685	-	98	46.870	ENSAMXG00000009468	dars2	95	46.870	Astyanax_mexicanus
ENSCING00000020685	-	99	46.341	ENSBTAG00000004358	DARS2	92	46.341	Bos_taurus
ENSCING00000020685	-	98	40.167	WBGene00001095	dars-2	96	40.167	Caenorhabditis_elegans
ENSCING00000020685	-	100	47.855	ENSCJAG00000009241	DARS2	93	47.855	Callithrix_jacchus
ENSCING00000020685	-	99	46.667	ENSCAFG00000014522	DARS2	92	46.667	Canis_familiaris
ENSCING00000020685	-	99	46.667	ENSCAFG00020017227	DARS2	95	46.700	Canis_lupus_dingo
ENSCING00000020685	-	99	46.179	ENSCHIG00000024830	DARS2	92	46.179	Capra_hircus
ENSCING00000020685	-	99	47.308	ENSTSYG00000001617	DARS2	74	47.308	Carlito_syrichta
ENSCING00000020685	-	99	36.738	ENSCAPG00000008510	DARS2	98	36.738	Cavia_aperea
ENSCING00000020685	-	99	48.130	ENSCPOG00000010575	DARS2	92	48.130	Cavia_porcellus
ENSCING00000020685	-	100	47.855	ENSCCAG00000029862	DARS2	93	47.855	Cebus_capucinus
ENSCING00000020685	-	100	46.580	ENSCATG00000032831	DARS2	93	46.580	Cercocebus_atys
ENSCING00000020685	-	99	47.213	ENSCLAG00000008286	DARS2	92	47.213	Chinchilla_lanigera
ENSCING00000020685	-	100	46.840	ENSCSAG00000011807	DARS2	93	46.840	Chlorocebus_sabaeus
ENSCING00000020685	-	100	45.990	ENSCHOG00000007949	DARS2	93	45.990	Choloepus_hoffmanni
ENSCING00000020685	-	98	45.270	ENSCPBG00000014727	DARS2	91	45.270	Chrysemys_picta_bellii
ENSCING00000020685	-	53	34.146	ENSCSAVG00000011225	-	68	34.146	Ciona_savignyi
ENSCING00000020685	-	100	47.049	ENSCANG00000018132	DARS2	93	47.049	Colobus_angolensis_palliatus
ENSCING00000020685	-	99	47.595	ENSCGRG00001021217	Dars2	92	47.595	Cricetulus_griseus_chok1gshd
ENSCING00000020685	-	99	47.595	ENSCGRG00000018286	Dars2	92	47.595	Cricetulus_griseus_crigri
ENSCING00000020685	-	98	46.891	ENSCSEG00000017136	dars2	88	46.891	Cynoglossus_semilaevis
ENSCING00000020685	-	55	32.222	ENSCSEG00000005464	nars2	68	32.222	Cynoglossus_semilaevis
ENSCING00000020685	-	98	47.466	ENSCVAG00000017840	dars2	90	47.466	Cyprinodon_variegatus
ENSCING00000020685	-	98	47.563	ENSDARG00000060861	dars2	89	47.563	Danio_rerio
ENSCING00000020685	-	99	46.305	ENSDNOG00000007070	DARS2	91	46.305	Dasypus_novemcinctus
ENSCING00000020685	-	99	47.619	ENSDORG00000014074	Dars2	92	47.619	Dipodomys_ordii
ENSCING00000020685	-	98	44.093	FBgn0051739	AspRS-m	63	44.093	Drosophila_melanogaster
ENSCING00000020685	-	77	54.008	ENSETEG00000019311	DARS2	72	54.008	Echinops_telfairi
ENSCING00000020685	-	98	44.706	ENSEBUG00000010331	dars2	91	44.706	Eptatretus_burgeri
ENSCING00000020685	-	99	47.862	ENSEASG00005017080	DARS2	92	47.862	Equus_asinus_asinus
ENSCING00000020685	-	99	47.697	ENSECAG00000004044	DARS2	95	47.697	Equus_caballus
ENSCING00000020685	-	99	47.913	ENSELUG00000010663	dars2	90	47.517	Esox_lucius
ENSCING00000020685	-	55	37.349	ENSELUG00000023629	nars2	70	37.349	Esox_lucius
ENSCING00000020685	-	99	45.691	ENSFCAG00000014922	DARS2	93	45.691	Felis_catus
ENSCING00000020685	-	99	45.320	ENSFALG00000007984	DARS2	94	45.320	Ficedula_albicollis
ENSCING00000020685	-	99	47.377	ENSFDAG00000003561	DARS2	92	47.377	Fukomys_damarensis
ENSCING00000020685	-	98	46.387	ENSFHEG00000001285	dars2	90	45.805	Fundulus_heteroclitus
ENSCING00000020685	-	84	46.498	ENSGMOG00000016195	dars2	99	46.498	Gadus_morhua
ENSCING00000020685	-	56	32.468	ENSGMOG00000012599	nars	60	32.468	Gadus_morhua
ENSCING00000020685	-	99	45.649	ENSGALG00000023749	DARS2	93	45.649	Gallus_gallus
ENSCING00000020685	-	53	32.468	ENSGAFG00000006981	nars	56	32.468	Gambusia_affinis
ENSCING00000020685	-	98	47.395	ENSGAFG00000006807	dars2	89	47.395	Gambusia_affinis
ENSCING00000020685	-	57	35.294	ENSGACG00000012085	nars2	73	35.294	Gasterosteus_aculeatus
ENSCING00000020685	-	85	44.574	ENSGACG00000014921	dars2	100	44.574	Gasterosteus_aculeatus
ENSCING00000020685	-	98	41.903	ENSGAGG00000018149	DARS2	91	41.903	Gopherus_agassizii
ENSCING00000020685	-	100	47.049	ENSGGOG00000000323	DARS2	93	47.049	Gorilla_gorilla
ENSCING00000020685	-	98	48.167	ENSHBUG00000019027	dars2	95	47.255	Haplochromis_burtoni
ENSCING00000020685	-	99	48.293	ENSHGLG00000006680	DARS2	90	48.293	Heterocephalus_glaber_female
ENSCING00000020685	-	99	48.293	ENSHGLG00100008754	DARS2	91	48.293	Heterocephalus_glaber_male
ENSCING00000020685	-	97	40.630	ENSHCOG00000014226	dars2	94	40.820	Hippocampus_comes
ENSCING00000020685	-	97	46.037	ENSIPUG00000017874	dars2	88	46.037	Ictalurus_punctatus
ENSCING00000020685	-	99	47.145	ENSSTOG00000015250	DARS2	91	47.145	Ictidomys_tridecemlineatus
ENSCING00000020685	-	99	46.029	ENSJJAG00000024152	Dars2	91	46.029	Jaculus_jaculus
ENSCING00000020685	-	98	46.128	ENSKMAG00000009973	dars2	93	45.826	Kryptolebias_marmoratus
ENSCING00000020685	-	53	32.468	ENSKMAG00000007257	nars	56	32.468	Kryptolebias_marmoratus
ENSCING00000020685	-	98	47.288	ENSLBEG00000020557	dars2	93	45.151	Labrus_bergylta
ENSCING00000020685	-	98	47.138	ENSLACG00000011843	DARS2	94	47.138	Latimeria_chalumnae
ENSCING00000020685	-	99	46.906	ENSLOCG00000009206	dars2	99	46.895	Lepisosteus_oculatus
ENSCING00000020685	-	99	46.865	ENSLAFG00000008719	DARS2	91	46.865	Loxodonta_africana
ENSCING00000020685	-	100	46.906	ENSMFAG00000003036	DARS2	93	46.906	Macaca_fascicularis
ENSCING00000020685	-	100	46.906	ENSMMUG00000022798	DARS2	93	46.906	Macaca_mulatta
ENSCING00000020685	-	94	46.805	ENSMNEG00000045415	DARS2	93	46.805	Macaca_nemestrina
ENSCING00000020685	-	100	45.617	ENSMLEG00000044248	DARS2	93	45.617	Mandrillus_leucophaeus
ENSCING00000020685	-	98	46.309	ENSMAMG00000011486	dars2	89	46.309	Mastacembelus_armatus
ENSCING00000020685	-	57	36.471	ENSMAMG00000012198	nars2	70	36.471	Mastacembelus_armatus
ENSCING00000020685	-	98	47.167	ENSMZEG00005010481	dars2	89	47.167	Maylandia_zebra
ENSCING00000020685	-	98	45.591	ENSMGAG00000003388	DARS2	92	45.591	Meleagris_gallopavo
ENSCING00000020685	-	62	53.770	ENSMAUG00000002392	Dars2	86	53.770	Mesocricetus_auratus
ENSCING00000020685	-	99	44.059	ENSMICG00000002969	DARS2	93	44.059	Microcebus_murinus
ENSCING00000020685	-	99	45.409	ENSMOCG00000020112	Dars2	91	45.409	Microtus_ochrogaster
ENSCING00000020685	-	53	32.468	ENSMMOG00000012206	nars	65	32.468	Mola_mola
ENSCING00000020685	-	98	45.178	ENSMMOG00000021524	dars2	99	45.178	Mola_mola
ENSCING00000020685	-	99	45.395	ENSMODG00000004188	DARS2	86	45.395	Monodelphis_domestica
ENSCING00000020685	-	98	40.847	ENSMALG00000003413	-	83	40.847	Monopterus_albus
ENSCING00000020685	-	99	45.977	MGP_CAROLIEiJ_G0014759	Dars2	91	45.977	Mus_caroli
ENSCING00000020685	-	99	46.755	ENSMUSG00000026709	Dars2	91	46.755	Mus_musculus
ENSCING00000020685	-	98	47.635	MGP_PahariEiJ_G0027995	Dars2	90	47.635	Mus_pahari
ENSCING00000020685	-	99	46.423	MGP_SPRETEiJ_G0015566	Dars2	91	46.423	Mus_spretus
ENSCING00000020685	-	99	46.569	ENSMPUG00000004716	DARS2	92	46.569	Mustela_putorius_furo
ENSCING00000020685	-	99	47.557	ENSMLUG00000011038	DARS2	92	47.557	Myotis_lucifugus
ENSCING00000020685	-	99	45.915	ENSNGAG00000000825	Dars2	92	45.915	Nannospalax_galili
ENSCING00000020685	-	81	50.000	ENSNBRG00000000638	dars2	92	50.000	Neolamprologus_brichardi
ENSCING00000020685	-	100	45.928	ENSNLEG00000015309	DARS2	93	45.928	Nomascus_leucogenys
ENSCING00000020685	-	98	42.905	ENSMEUG00000001563	DARS2	91	42.905	Notamacropus_eugenii
ENSCING00000020685	-	72	49.718	ENSOPRG00000013012	DARS2	68	49.718	Ochotona_princeps
ENSCING00000020685	-	100	46.721	ENSODEG00000012436	DARS2	93	46.721	Octodon_degus
ENSCING00000020685	-	98	47.716	ENSONIG00000016633	dars2	98	47.716	Oreochromis_niloticus
ENSCING00000020685	-	53	32.468	ENSOANG00000001717	-	63	32.468	Ornithorhynchus_anatinus
ENSCING00000020685	-	99	47.145	ENSOANG00000000921	DARS2	92	47.145	Ornithorhynchus_anatinus
ENSCING00000020685	-	99	46.546	ENSOCUG00000007841	DARS2	93	46.546	Oryctolagus_cuniculus
ENSCING00000020685	-	99	45.902	ENSORLG00000013328	dars2	92	45.902	Oryzias_latipes
ENSCING00000020685	-	56	35.165	ENSORLG00000002778	nars2	71	35.165	Oryzias_latipes
ENSCING00000020685	-	56	35.165	ENSORLG00020015748	nars2	71	35.165	Oryzias_latipes_hni
ENSCING00000020685	-	98	46.399	ENSORLG00020004408	dars2	97	46.399	Oryzias_latipes_hni
ENSCING00000020685	-	98	46.218	ENSORLG00015021058	dars2	90	46.218	Oryzias_latipes_hsok
ENSCING00000020685	-	56	35.165	ENSORLG00015021491	nars2	71	35.165	Oryzias_latipes_hsok
ENSCING00000020685	-	56	35.165	ENSOMEG00000001474	nars2	71	35.165	Oryzias_melastigma
ENSCING00000020685	-	98	46.891	ENSOMEG00000016596	dars2	89	46.891	Oryzias_melastigma
ENSCING00000020685	-	99	47.791	ENSOGAG00000004039	DARS2	93	47.791	Otolemur_garnettii
ENSCING00000020685	-	99	46.104	ENSOARG00000012642	DARS2	92	46.104	Ovis_aries
ENSCING00000020685	-	100	47.049	ENSPPAG00000041909	DARS2	93	47.049	Pan_paniscus
ENSCING00000020685	-	100	46.515	ENSPPRG00000010631	DARS2	93	46.515	Panthera_pardus
ENSCING00000020685	-	100	46.353	ENSPTIG00000019809	DARS2	93	46.353	Panthera_tigris_altaica
ENSCING00000020685	-	100	47.049	ENSPTRG00000001698	DARS2	93	47.049	Pan_troglodytes
ENSCING00000020685	-	99	46.053	ENSPANG00000016074	DARS2	92	46.053	Papio_anubis
ENSCING00000020685	-	96	46.167	ENSPKIG00000006591	dars2	90	46.465	Paramormyrops_kingsleyae
ENSCING00000020685	-	99	42.975	ENSPSIG00000016813	DARS2	93	42.975	Pelodiscus_sinensis
ENSCING00000020685	-	97	47.619	ENSPMGG00000018525	dars2	94	47.619	Periophthalmus_magnuspinnatus
ENSCING00000020685	-	99	45.409	ENSPEMG00000009176	Dars2	91	45.409	Peromyscus_maniculatus_bairdii
ENSCING00000020685	-	98	44.670	ENSPMAG00000008987	dars2	96	44.670	Petromyzon_marinus
ENSCING00000020685	-	98	46.566	ENSPCIG00000003525	DARS2	84	46.566	Phascolarctos_cinereus
ENSCING00000020685	-	98	47.563	ENSPFOG00000004144	dars2	89	47.563	Poecilia_formosa
ENSCING00000020685	-	98	47.563	ENSPLAG00000015427	dars2	94	46.801	Poecilia_latipinna
ENSCING00000020685	-	98	47.563	ENSPMEG00000012688	dars2	93	46.801	Poecilia_mexicana
ENSCING00000020685	-	98	42.373	ENSPREG00000014984	dars2	88	42.373	Poecilia_reticulata
ENSCING00000020685	-	98	47.245	ENSPPYG00000000493	DARS2	92	47.245	Pongo_abelii
ENSCING00000020685	-	55	50.000	ENSPCAG00000016549	DARS2	52	50.000	Procavia_capensis
ENSCING00000020685	-	86	39.923	ENSPCOG00000013908	DARS2	88	39.923	Propithecus_coquereli
ENSCING00000020685	-	99	43.230	ENSPVAG00000007584	DARS2	93	43.230	Pteropus_vampyrus
ENSCING00000020685	-	98	47.833	ENSPNYG00000012231	dars2	90	47.833	Pundamilia_nyererei
ENSCING00000020685	-	98	46.488	ENSPNAG00000001371	dars2	91	45.286	Pygocentrus_nattereri
ENSCING00000020685	-	99	46.305	ENSRNOG00000002813	Dars2	92	46.305	Rattus_norvegicus
ENSCING00000020685	-	100	47.136	ENSRBIG00000039012	DARS2	93	47.136	Rhinopithecus_bieti
ENSCING00000020685	-	100	46.885	ENSRROG00000028963	DARS2	93	46.885	Rhinopithecus_roxellana
ENSCING00000020685	-	98	33.951	YPL104W	MSD1	95	33.951	Saccharomyces_cerevisiae
ENSCING00000020685	-	53	32.911	YHR019C	DED81	57	32.911	Saccharomyces_cerevisiae
ENSCING00000020685	-	100	47.525	ENSSBOG00000023515	DARS2	93	47.525	Saimiri_boliviensis_boliviensis
ENSCING00000020685	-	98	46.465	ENSSHAG00000006185	DARS2	88	46.465	Sarcophilus_harrisii
ENSCING00000020685	-	97	47.218	ENSSFOG00015018461	dars2	89	47.218	Scleropages_formosus
ENSCING00000020685	-	98	45.777	ENSSMAG00000000796	dars2	90	44.891	Scophthalmus_maximus
ENSCING00000020685	-	58	34.066	ENSSDUG00000013432	nars2	73	34.066	Seriola_dumerili
ENSCING00000020685	-	98	45.270	ENSSDUG00000002966	dars2	89	45.270	Seriola_dumerili
ENSCING00000020685	-	58	34.066	ENSSLDG00000022896	nars2	73	34.066	Seriola_lalandi_dorsalis
ENSCING00000020685	-	100	44.499	ENSSLDG00000011067	dars2	90	44.499	Seriola_lalandi_dorsalis
ENSCING00000020685	-	56	45.906	ENSSARG00000006758	-	76	45.906	Sorex_araneus
ENSCING00000020685	-	98	46.399	ENSSPUG00000018568	DARS2	95	46.399	Sphenodon_punctatus
ENSCING00000020685	-	57	35.294	ENSSPAG00000006472	nars2	72	35.294	Stegastes_partitus
ENSCING00000020685	-	98	46.912	ENSSPAG00000006776	dars2	95	46.912	Stegastes_partitus
ENSCING00000020685	-	99	48.087	ENSSSCG00000015492	DARS2	91	48.087	Sus_scrofa
ENSCING00000020685	-	99	45.156	ENSTGUG00000017335	DARS2	99	45.156	Taeniopygia_guttata
ENSCING00000020685	-	97	46.555	ENSTRUG00000007129	dars2	93	46.555	Takifugu_rubripes
ENSCING00000020685	-	55	34.118	ENSTRUG00000013557	nars2	73	34.118	Takifugu_rubripes
ENSCING00000020685	-	53	32.468	ENSTNIG00000002274	nars	64	32.468	Tetraodon_nigroviridis
ENSCING00000020685	-	98	46.024	ENSTNIG00000003303	dars2	97	46.024	Tetraodon_nigroviridis
ENSCING00000020685	-	61	53.061	ENSTBEG00000002835	DARS2	66	53.061	Tupaia_belangeri
ENSCING00000020685	-	100	45.738	ENSTTRG00000008559	DARS2	93	45.738	Tursiops_truncatus
ENSCING00000020685	-	99	46.895	ENSUAMG00000019506	DARS2	92	46.895	Ursus_americanus
ENSCING00000020685	-	99	46.667	ENSUMAG00000020024	DARS2	96	44.554	Ursus_maritimus
ENSCING00000020685	-	100	47.222	ENSVPAG00000002588	DARS2	93	47.222	Vicugna_pacos
ENSCING00000020685	-	99	46.504	ENSVVUG00000014380	DARS2	92	46.504	Vulpes_vulpes
ENSCING00000020685	-	98	43.707	ENSXETG00000020014	dars2	95	43.707	Xenopus_tropicalis
ENSCING00000020685	-	98	44.595	ENSXCOG00000007983	dars2	90	44.595	Xiphophorus_couchianus
ENSCING00000020685	-	98	47.227	ENSXMAG00000018529	dars2	95	47.049	Xiphophorus_maculatus