EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020776 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 723 bases
Position: chr14:4014429-4015151
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000036228	eIF3_subunit	PF08597.10	1.3e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000035031	-	723	-	ENSCINP00000036228	240 (aa)	-	H2Y2U3

Gene Model

Click here to download ENSCING00000020776's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020776's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020776	-	97	38.000	ENSG00000104131	EIF3J	94	40.909	Homo_sapiens
ENSCING00000020776	-	97	40.574	ENSAPOG00000010317	eif3jb	100	40.664	Acanthochromis_polyacanthus
ENSCING00000020776	-	97	38.800	ENSAMEG00000015104	EIF3J	95	35.600	Ailuropoda_melanoleuca
ENSCING00000020776	-	95	37.815	ENSACIG00000006469	eif3jb	99	34.599	Amphilophus_citrinellus
ENSCING00000020776	-	97	40.081	ENSAOCG00000014984	eif3jb	100	38.934	Amphiprion_ocellaris
ENSCING00000020776	-	97	40.081	ENSAPEG00000015854	eif3jb	100	38.934	Amphiprion_percula
ENSCING00000020776	-	97	39.024	ENSATEG00000008562	eif3jb	100	39.024	Anabas_testudineus
ENSCING00000020776	-	64	42.138	ENSAPLG00000008484	EIF3J	90	40.541	Anas_platyrhynchos
ENSCING00000020776	-	64	40.881	ENSACAG00000013759	EIF3J	65	39.189	Anolis_carolinensis
ENSCING00000020776	-	97	38.400	ENSANAG00000019682	EIF3J	96	35.600	Aotus_nancymaae
ENSCING00000020776	-	65	38.272	ENSANAG00000035652	-	88	36.486	Aotus_nancymaae
ENSCING00000020776	-	95	40.586	ENSACLG00000026284	eif3jb	99	38.912	Astatotilapia_calliptera
ENSCING00000020776	-	97	42.339	ENSAMXG00000030386	eif3ja	98	36.800	Astyanax_mexicanus
ENSCING00000020776	-	97	42.745	ENSAMXG00000034194	eif3jb	98	42.688	Astyanax_mexicanus
ENSCING00000020776	-	97	38.400	ENSBTAG00000000359	EIF3J	96	35.600	Bos_taurus
ENSCING00000020776	-	98	38.189	ENSCJAG00000002412	EIF3J	97	35.294	Callithrix_jacchus
ENSCING00000020776	-	97	38.800	ENSCAFG00000013577	EIF3J	95	35.600	Canis_familiaris
ENSCING00000020776	-	97	34.940	ENSCAFG00020022194	EIF3J	58	39.189	Canis_lupus_dingo
ENSCING00000020776	-	90	39.111	ENSCHIG00000022155	-	89	35.242	Capra_hircus
ENSCING00000020776	-	97	34.940	ENSCHIG00000023791	EIF3J	60	39.189	Capra_hircus
ENSCING00000020776	-	90	41.410	ENSTSYG00000013685	EIF3J	95	37.445	Carlito_syrichta
ENSCING00000020776	-	97	38.710	ENSCPOG00000012396	EIF3J	94	35.887	Cavia_porcellus
ENSCING00000020776	-	78	36.041	ENSCCAG00000014291	-	55	36.913	Cebus_capucinus
ENSCING00000020776	-	97	38.400	ENSCCAG00000028410	EIF3J	96	35.600	Cebus_capucinus
ENSCING00000020776	-	65	38.323	ENSCCAG00000036406	-	65	38.000	Cebus_capucinus
ENSCING00000020776	-	97	38.400	ENSCATG00000033376	EIF3J	96	35.600	Cercocebus_atys
ENSCING00000020776	-	84	39.151	ENSCLAG00000017286	EIF3J	69	38.514	Chinchilla_lanigera
ENSCING00000020776	-	97	38.800	ENSCSAG00000018642	-	96	36.000	Chlorocebus_sabaeus
ENSCING00000020776	-	97	36.800	ENSCPBG00000025162	EIF3J	98	34.400	Chrysemys_picta_bellii
ENSCING00000020776	-	97	71.915	ENSCSAVG00000003021	-	98	71.795	Ciona_savignyi
ENSCING00000020776	-	97	37.945	ENSCANG00000036763	EIF3J	97	35.178	Colobus_angolensis_palliatus
ENSCING00000020776	-	97	38.800	ENSCGRG00001009334	-	95	35.600	Cricetulus_griseus_chok1gshd
ENSCING00000020776	-	97	38.462	ENSCSEG00000002171	eif3jb	100	38.057	Cynoglossus_semilaevis
ENSCING00000020776	-	98	41.767	ENSDARG00000012603	eif3ja	99	39.912	Danio_rerio
ENSCING00000020776	-	97	39.163	ENSDARG00000053370	eif3jb	98	35.385	Danio_rerio
ENSCING00000020776	-	97	38.492	ENSDNOG00000042545	EIF3J	93	35.317	Dasypus_novemcinctus
ENSCING00000020776	-	97	35.223	FBgn0027619	eIF3j	99	33.471	Drosophila_melanogaster
ENSCING00000020776	-	96	35.270	ENSEBUG00000001522	eif3jb	97	34.025	Eptatretus_burgeri
ENSCING00000020776	-	97	34.538	ENSEASG00005018015	EIF3J	58	39.189	Equus_asinus_asinus
ENSCING00000020776	-	84	39.623	ENSEEUG00000000932	EIF3J	69	38.514	Erinaceus_europaeus
ENSCING00000020776	-	97	40.161	ENSELUG00000005499	eif3ja	98	38.153	Esox_lucius
ENSCING00000020776	-	98	41.935	ENSELUG00000017273	eif3jb	99	41.057	Esox_lucius
ENSCING00000020776	-	97	38.400	ENSFCAG00000034878	EIF3J	96	35.600	Felis_catus
ENSCING00000020776	-	85	39.535	ENSFALG00000004996	EIF3J	68	39.189	Ficedula_albicollis
ENSCING00000020776	-	84	39.151	ENSFDAG00000006854	EIF3J	69	39.189	Fukomys_damarensis
ENSCING00000020776	-	97	40.000	ENSFHEG00000019467	eif3jb	100	36.885	Fundulus_heteroclitus
ENSCING00000020776	-	77	40.314	ENSGMOG00000016027	eif3jb	99	37.500	Gadus_morhua
ENSCING00000020776	-	97	40.316	ENSGALG00000008187	EIF3J	98	41.502	Gallus_gallus
ENSCING00000020776	-	97	40.408	ENSGAFG00000013574	eif3jb	100	39.592	Gambusia_affinis
ENSCING00000020776	-	97	41.224	ENSGACG00000015551	eif3jb	100	38.367	Gasterosteus_aculeatus
ENSCING00000020776	-	90	37.387	ENSGAGG00000015010	EIF3J	59	40.411	Gopherus_agassizii
ENSCING00000020776	-	90	40.088	ENSGGOG00000000548	EIF3J	100	37.004	Gorilla_gorilla
ENSCING00000020776	-	97	41.152	ENSHBUG00000014433	eif3jb	100	41.152	Haplochromis_burtoni
ENSCING00000020776	-	68	34.503	ENSHGLG00000003445	-	54	33.333	Heterocephalus_glaber_female
ENSCING00000020776	-	94	35.983	ENSHGLG00000020813	-	93	33.054	Heterocephalus_glaber_female
ENSCING00000020776	-	97	37.600	ENSHGLG00000015053	-	95	35.200	Heterocephalus_glaber_female
ENSCING00000020776	-	68	32.749	ENSHGLG00100008711	-	52	31.293	Heterocephalus_glaber_male
ENSCING00000020776	-	97	32.669	ENSHGLG00100007247	-	93	30.612	Heterocephalus_glaber_male
ENSCING00000020776	-	95	35.685	ENSHGLG00100019163	-	95	33.610	Heterocephalus_glaber_male
ENSCING00000020776	-	84	38.679	ENSHGLG00100007538	-	69	39.189	Heterocephalus_glaber_male
ENSCING00000020776	-	97	40.741	ENSHCOG00000008338	eif3jb	100	39.419	Hippocampus_comes
ENSCING00000020776	-	98	42.169	ENSIPUG00000020304	eif3ja	99	38.153	Ictalurus_punctatus
ENSCING00000020776	-	97	37.143	ENSIPUG00000015427	eif3jb	98	38.075	Ictalurus_punctatus
ENSCING00000020776	-	97	38.400	ENSSTOG00000025483	EIF3J	95	36.000	Ictidomys_tridecemlineatus
ENSCING00000020776	-	75	39.785	ENSKMAG00000002556	eif3jb	90	40.000	Kryptolebias_marmoratus
ENSCING00000020776	-	97	39.431	ENSLBEG00000001665	eif3jb	100	39.837	Labrus_bergylta
ENSCING00000020776	-	97	38.800	ENSLACG00000011985	EIF3J	97	38.400	Latimeria_chalumnae
ENSCING00000020776	-	98	40.161	ENSLOCG00000013769	eif3ja	97	39.357	Lepisosteus_oculatus
ENSCING00000020776	-	84	39.623	ENSLAFG00000009268	EIF3J	69	39.189	Loxodonta_africana
ENSCING00000020776	-	97	38.400	ENSMFAG00000031049	EIF3J	96	35.600	Macaca_fascicularis
ENSCING00000020776	-	97	38.400	ENSMMUG00000014288	EIF3J	95	35.600	Macaca_mulatta
ENSCING00000020776	-	97	38.400	ENSMNEG00000022347	EIF3J	96	35.600	Macaca_nemestrina
ENSCING00000020776	-	84	39.623	ENSMLEG00000040280	EIF3J	69	39.189	Mandrillus_leucophaeus
ENSCING00000020776	-	97	38.306	ENSMAMG00000000869	eif3jb	100	38.710	Mastacembelus_armatus
ENSCING00000020776	-	97	40.741	ENSMZEG00005001694	eif3jb	100	39.095	Maylandia_zebra
ENSCING00000020776	-	84	40.376	ENSMGAG00000010307	EIF3J	69	39.865	Meleagris_gallopavo
ENSCING00000020776	-	97	38.800	ENSMAUG00000019190	-	95	35.600	Mesocricetus_auratus
ENSCING00000020776	-	74	36.508	ENSMICG00000026531	-	91	31.466	Microcebus_murinus
ENSCING00000020776	-	97	39.044	ENSMICG00000005006	-	96	35.857	Microcebus_murinus
ENSCING00000020776	-	97	38.800	ENSMOCG00000022505	-	95	35.600	Microtus_ochrogaster
ENSCING00000020776	-	95	32.068	ENSMMOG00000017326	eif3jb	66	33.784	Mola_mola
ENSCING00000020776	-	98	35.628	ENSMALG00000018222	eif3jb	64	34.899	Monopterus_albus
ENSCING00000020776	-	97	38.400	MGP_CAROLIEiJ_G0024201	-	95	35.200	Mus_caroli
ENSCING00000020776	-	97	38.400	ENSMUSG00000027236	Eif3j1	95	35.200	Mus_musculus
ENSCING00000020776	-	97	38.400	ENSMUSG00000043424	Eif3j2	94	35.200	Mus_musculus
ENSCING00000020776	-	97	38.400	MGP_PahariEiJ_G0025645	-	95	35.200	Mus_pahari
ENSCING00000020776	-	84	33.962	ENSMPUG00000010765	EIF3J	53	40.909	Mustela_putorius_furo
ENSCING00000020776	-	97	40.000	ENSMLUG00000023600	EIF3J	94	37.600	Myotis_lucifugus
ENSCING00000020776	-	97	38.000	ENSNGAG00000017917	-	95	35.600	Nannospalax_galili
ENSCING00000020776	-	95	37.815	ENSNBRG00000014228	eif3jb	94	35.593	Neolamprologus_brichardi
ENSCING00000020776	-	88	38.393	ENSNLEG00000031859	-	56	34.899	Nomascus_leucogenys
ENSCING00000020776	-	97	38.400	ENSNLEG00000005568	EIF3J	95	35.600	Nomascus_leucogenys
ENSCING00000020776	-	63	38.710	ENSMEUG00000010372	EIF3J	61	40.000	Notamacropus_eugenii
ENSCING00000020776	-	90	40.529	ENSODEG00000016386	-	90	37.885	Octodon_degus
ENSCING00000020776	-	97	40.562	ENSODEG00000018669	-	95	35.887	Octodon_degus
ENSCING00000020776	-	82	38.462	ENSODEG00000019255	-	95	35.577	Octodon_degus
ENSCING00000020776	-	97	39.918	ENSONIG00000006245	eif3jb	100	41.564	Oreochromis_niloticus
ENSCING00000020776	-	66	39.080	ENSOANG00000007805	-	65	40.940	Ornithorhynchus_anatinus
ENSCING00000020776	-	97	37.600	ENSOCUG00000005376	EIF3J	95	36.000	Oryctolagus_cuniculus
ENSCING00000020776	-	99	40.945	ENSORLG00000006244	eif3jb	98	39.344	Oryzias_latipes
ENSCING00000020776	-	99	40.551	ENSORLG00020013628	eif3jb	95	39.764	Oryzias_latipes_hni
ENSCING00000020776	-	98	40.562	ENSORLG00015012204	eif3jb	95	40.157	Oryzias_latipes_hsok
ENSCING00000020776	-	99	39.921	ENSOMEG00000019427	eif3jb	100	37.743	Oryzias_melastigma
ENSCING00000020776	-	97	38.400	ENSOGAG00000004694	EIF3J	94	35.600	Otolemur_garnettii
ENSCING00000020776	-	84	39.810	ENSOARG00000003638	EIF3J	69	39.189	Ovis_aries
ENSCING00000020776	-	97	38.800	ENSPPRG00000001550	EIF3J	96	35.600	Panthera_pardus
ENSCING00000020776	-	97	38.400	ENSPTRG00000051845	EIF3J	95	35.600	Pan_troglodytes
ENSCING00000020776	-	97	38.400	ENSPANG00000018029	EIF3J	95	35.600	Papio_anubis
ENSCING00000020776	-	98	35.540	ENSPKIG00000016009	EIF3J	54	38.514	Paramormyrops_kingsleyae
ENSCING00000020776	-	98	38.132	ENSPKIG00000015047	-	99	35.409	Paramormyrops_kingsleyae
ENSCING00000020776	-	64	42.138	ENSPSIG00000007786	EIF3J	58	41.096	Pelodiscus_sinensis
ENSCING00000020776	-	77	36.842	ENSPMGG00000004930	eif3jb	68	41.497	Periophthalmus_magnuspinnatus
ENSCING00000020776	-	62	38.312	ENSPMAG00000000533	eif3jb	92	38.356	Petromyzon_marinus
ENSCING00000020776	-	97	36.437	ENSPCIG00000018265	-	94	35.391	Phascolarctos_cinereus
ENSCING00000020776	-	75	41.711	ENSPFOG00000003061	eif3jb	99	36.735	Poecilia_formosa
ENSCING00000020776	-	75	37.634	ENSPLAG00000013586	eif3jb	100	36.475	Poecilia_latipinna
ENSCING00000020776	-	75	42.473	ENSPMEG00000007601	eif3jb	100	37.295	Poecilia_mexicana
ENSCING00000020776	-	75	41.398	ENSPREG00000022834	eif3jb	100	40.000	Poecilia_reticulata
ENSCING00000020776	-	97	34.800	ENSPPYG00000006431	EIF3J	95	32.540	Pongo_abelii
ENSCING00000020776	-	97	39.200	ENSPCAG00000016156	EIF3J	96	35.600	Procavia_capensis
ENSCING00000020776	-	97	33.061	ENSPCOG00000021934	EIF3J	69	39.189	Propithecus_coquereli
ENSCING00000020776	-	97	39.200	ENSPVAG00000014177	EIF3J	95	36.000	Pteropus_vampyrus
ENSCING00000020776	-	95	38.494	ENSPNYG00000006813	eif3jb	99	36.287	Pundamilia_nyererei
ENSCING00000020776	-	97	41.667	ENSPNAG00000013230	eif3jb	98	43.426	Pygocentrus_nattereri
ENSCING00000020776	-	97	41.532	ENSPNAG00000017022	eif3ja	98	37.500	Pygocentrus_nattereri
ENSCING00000020776	-	97	38.400	ENSRNOG00000016459	Eif3j	95	35.200	Rattus_norvegicus
ENSCING00000020776	-	84	39.623	ENSRBIG00000044268	EIF3J	69	39.189	Rhinopithecus_bieti
ENSCING00000020776	-	97	37.551	ENSRROG00000029397	-	84	36.364	Rhinopithecus_roxellana
ENSCING00000020776	-	90	40.088	ENSSBOG00000035282	EIF3J	96	35.600	Saimiri_boliviensis_boliviensis
ENSCING00000020776	-	98	32.129	ENSSBOG00000032137	-	57	33.562	Saimiri_boliviensis_boliviensis
ENSCING00000020776	-	88	39.640	ENSSHAG00000016772	EIF3J	66	39.189	Sarcophilus_harrisii
ENSCING00000020776	-	98	40.496	ENSSFOG00015024043	eif3j	61	38.095	Scleropages_formosus
ENSCING00000020776	-	98	37.500	ENSSFOG00015015383	EIF3J	99	36.179	Scleropages_formosus
ENSCING00000020776	-	95	39.095	ENSSMAG00000021380	eif3jb	91	38.843	Scophthalmus_maximus
ENSCING00000020776	-	97	38.618	ENSSDUG00000008165	eif3jb	100	40.244	Seriola_dumerili
ENSCING00000020776	-	97	39.024	ENSSLDG00000000656	eif3jb	100	39.837	Seriola_lalandi_dorsalis
ENSCING00000020776	-	97	38.400	ENSSARG00000005130	EIF3J	96	35.600	Sorex_araneus
ENSCING00000020776	-	97	39.754	ENSSPAG00000019827	eif3jb	100	38.934	Stegastes_partitus
ENSCING00000020776	-	97	34.538	ENSSSCG00000004691	EIF3J	70	39.189	Sus_scrofa
ENSCING00000020776	-	98	40.323	ENSTNIG00000009400	eif3jb	99	37.903	Tetraodon_nigroviridis
ENSCING00000020776	-	97	35.341	ENSTBEG00000013922	EIF3J	56	39.189	Tupaia_belangeri
ENSCING00000020776	-	71	38.919	ENSTTRG00000015233	EIF3J	96	35.829	Tursiops_truncatus
ENSCING00000020776	-	97	34.940	ENSUAMG00000028179	EIF3J	60	39.189	Ursus_americanus
ENSCING00000020776	-	84	39.623	ENSVPAG00000006308	EIF3J	69	39.189	Vicugna_pacos
ENSCING00000020776	-	97	34.538	ENSVVUG00000010868	EIF3J	58	39.189	Vulpes_vulpes
ENSCING00000020776	-	97	38.760	ENSXETG00000007840	eif3j	94	33.333	Xenopus_tropicalis
ENSCING00000020776	-	51	33.077	ENSXCOG00000011013	eif3jb	73	35.099	Xiphophorus_couchianus
ENSCING00000020776	-	75	40.526	ENSXMAG00000001192	eif3jb	99	39.357	Xiphophorus_maculatus