EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020807 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 4180 bases
Position: chr1:7800284-7804463
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000034452	MMR_HSR1	PF01926.23	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000035376	-	1642	-	ENSCINP00000034452	379 (aa)	-	H2XXR8

Gene Model

Click here to download ENSCING00000020807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020807's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020807	-	93	61.364	ENSAPOG00000010378	si:dkey-98f17.5	81	61.364	Acanthochromis_polyacanthus
ENSCING00000020807	-	99	61.804	ENSAPOG00000018833	si:ch211-11k18.4	89	62.400	Acanthochromis_polyacanthus
ENSCING00000020807	-	99	59.524	ENSACIG00000006696	si:ch211-11k18.4	83	59.524	Amphilophus_citrinellus
ENSCING00000020807	-	94	62.360	ENSACIG00000017719	si:dkey-98f17.5	79	62.360	Amphilophus_citrinellus
ENSCING00000020807	-	99	62.069	ENSAOCG00000014284	si:ch211-11k18.4	83	62.069	Amphiprion_ocellaris
ENSCING00000020807	-	91	62.609	ENSAOCG00000008661	si:dkey-98f17.5	77	62.609	Amphiprion_ocellaris
ENSCING00000020807	-	91	62.319	ENSAPEG00000022447	si:dkey-98f17.5	77	62.319	Amphiprion_percula
ENSCING00000020807	-	99	61.804	ENSAPEG00000014910	si:ch211-11k18.4	84	61.804	Amphiprion_percula
ENSCING00000020807	-	99	61.008	ENSATEG00000004775	si:ch211-11k18.4	83	61.008	Anabas_testudineus
ENSCING00000020807	-	94	61.517	ENSATEG00000007188	si:dkey-98f17.5	79	61.517	Anabas_testudineus
ENSCING00000020807	-	97	58.333	ENSACAG00000028632	-	82	58.333	Anolis_carolinensis
ENSCING00000020807	-	99	62.334	ENSACLG00000007907	si:ch211-11k18.4	83	62.334	Astatotilapia_calliptera
ENSCING00000020807	-	94	62.360	ENSACLG00000001308	si:dkey-98f17.5	79	62.360	Astatotilapia_calliptera
ENSCING00000020807	-	99	61.968	ENSAMXG00000017817	si:ch211-11k18.4	88	61.579	Astyanax_mexicanus
ENSCING00000020807	-	96	58.791	ENSAMXG00000001190	si:dkey-98f17.5	80	58.791	Astyanax_mexicanus
ENSCING00000020807	-	98	89.276	ENSCSAVG00000009987	-	83	89.276	Ciona_savignyi
ENSCING00000020807	-	95	60.942	ENSCSEG00000017512	si:dkey-98f17.5	74	63.777	Cynoglossus_semilaevis
ENSCING00000020807	-	98	62.903	ENSCSEG00000017661	si:ch211-11k18.4	84	62.567	Cynoglossus_semilaevis
ENSCING00000020807	-	99	63.660	ENSCVAG00000015346	si:ch211-11k18.4	89	63.660	Cyprinodon_variegatus
ENSCING00000020807	-	91	62.609	ENSCVAG00000011351	si:dkey-98f17.5	77	62.609	Cyprinodon_variegatus
ENSCING00000020807	-	96	59.615	ENSDARG00000068863	si:dkey-98f17.5	80	59.615	Danio_rerio
ENSCING00000020807	-	99	60.212	ENSDARG00000087869	si:ch211-11k18.4	100	67.005	Danio_rerio
ENSCING00000020807	-	94	53.611	ENSEBUG00000007620	si:dkey-98f17.5	96	53.611	Eptatretus_burgeri
ENSCING00000020807	-	93	63.068	ENSELUG00000003365	si:dkey-98f17.5	81	66.890	Esox_lucius
ENSCING00000020807	-	94	59.831	ENSFHEG00000012744	si:dkey-98f17.5	79	59.831	Fundulus_heteroclitus
ENSCING00000020807	-	99	61.376	ENSFHEG00000019820	si:ch211-11k18.4	83	61.376	Fundulus_heteroclitus
ENSCING00000020807	-	98	54.570	ENSGMOG00000003492	si:ch211-11k18.4	92	54.570	Gadus_morhua
ENSCING00000020807	-	99	60.477	ENSGAFG00000005677	si:ch211-11k18.4	83	60.477	Gambusia_affinis
ENSCING00000020807	-	94	59.831	ENSGAFG00000012362	si:dkey-98f17.5	71	59.831	Gambusia_affinis
ENSCING00000020807	-	65	72.065	ENSGACG00000009399	si:dkey-98f17.5	95	72.065	Gasterosteus_aculeatus
ENSCING00000020807	-	99	61.804	ENSGACG00000013134	si:ch211-11k18.4	93	61.804	Gasterosteus_aculeatus
ENSCING00000020807	-	99	62.334	ENSHBUG00000020638	si:ch211-11k18.4	83	62.334	Haplochromis_burtoni
ENSCING00000020807	-	94	62.079	ENSHBUG00000008331	si:dkey-98f17.5	79	62.079	Haplochromis_burtoni
ENSCING00000020807	-	99	62.334	ENSHCOG00000014773	si:ch211-11k18.4	84	62.334	Hippocampus_comes
ENSCING00000020807	-	96	59.780	ENSHCOG00000016505	si:dkey-98f17.5	81	59.780	Hippocampus_comes
ENSCING00000020807	-	96	59.178	ENSIPUG00000016694	si:ch211-11k18.4	80	59.178	Ictalurus_punctatus
ENSCING00000020807	-	91	60.580	ENSIPUG00000019981	si:dkey-98f17.5	77	60.580	Ictalurus_punctatus
ENSCING00000020807	-	99	62.269	ENSIPUG00000016678	si:ch211-11k18.4	93	62.269	Ictalurus_punctatus
ENSCING00000020807	-	94	60.674	ENSKMAG00000014997	si:dkey-98f17.5	79	60.674	Kryptolebias_marmoratus
ENSCING00000020807	-	99	61.008	ENSKMAG00000009327	si:ch211-11k18.4	83	61.008	Kryptolebias_marmoratus
ENSCING00000020807	-	94	61.517	ENSLBEG00000012756	si:dkey-98f17.5	79	61.517	Labrus_bergylta
ENSCING00000020807	-	98	61.230	ENSLACG00000004899	-	83	61.230	Latimeria_chalumnae
ENSCING00000020807	-	98	62.933	ENSLACG00000006280	si:ch211-11k18.4	83	62.933	Latimeria_chalumnae
ENSCING00000020807	-	91	59.475	ENSLACG00000017433	si:dkey-98f17.5	75	59.475	Latimeria_chalumnae
ENSCING00000020807	-	93	60.674	ENSLOCG00000003824	si:dkey-98f17.5	79	60.674	Lepisosteus_oculatus
ENSCING00000020807	-	91	61.449	ENSMAMG00000014528	si:dkey-98f17.5	77	61.449	Mastacembelus_armatus
ENSCING00000020807	-	99	61.719	ENSMAMG00000002536	si:ch211-11k18.4	92	61.719	Mastacembelus_armatus
ENSCING00000020807	-	100	62.730	ENSMZEG00005008941	si:ch211-11k18.4	83	62.069	Maylandia_zebra
ENSCING00000020807	-	94	62.079	ENSMZEG00005016572	si:dkey-98f17.5	79	62.079	Maylandia_zebra
ENSCING00000020807	-	97	60.541	ENSMMOG00000012485	si:ch211-11k18.4	82	60.541	Mola_mola
ENSCING00000020807	-	93	61.080	ENSMALG00000012761	si:dkey-98f17.5	80	61.080	Monopterus_albus
ENSCING00000020807	-	99	62.069	ENSMALG00000019735	si:ch211-11k18.4	83	62.069	Monopterus_albus
ENSCING00000020807	-	99	61.804	ENSNBRG00000002220	si:ch211-11k18.4	86	61.804	Neolamprologus_brichardi
ENSCING00000020807	-	94	62.570	ENSNBRG00000006068	si:dkey-98f17.5	80	62.570	Neolamprologus_brichardi
ENSCING00000020807	-	94	62.640	ENSONIG00000013568	si:dkey-98f17.5	79	62.640	Oreochromis_niloticus
ENSCING00000020807	-	99	61.273	ENSONIG00000019412	si:ch211-11k18.4	83	61.273	Oreochromis_niloticus
ENSCING00000020807	-	87	63.110	ENSORLG00000007958	si:dkey-98f17.5	76	63.110	Oryzias_latipes
ENSCING00000020807	-	98	62.097	ENSORLG00000012015	si:ch211-11k18.4	82	62.097	Oryzias_latipes
ENSCING00000020807	-	94	61.798	ENSORLG00020013350	si:dkey-98f17.5	79	61.798	Oryzias_latipes_hni
ENSCING00000020807	-	98	62.366	ENSORLG00020012386	si:ch211-11k18.4	82	62.366	Oryzias_latipes_hni
ENSCING00000020807	-	94	61.517	ENSORLG00015002000	si:dkey-98f17.5	79	61.517	Oryzias_latipes_hsok
ENSCING00000020807	-	98	61.828	ENSORLG00015022862	si:ch211-11k18.4	82	61.828	Oryzias_latipes_hsok
ENSCING00000020807	-	91	62.899	ENSOMEG00000003154	si:dkey-98f17.5	79	62.899	Oryzias_melastigma
ENSCING00000020807	-	99	62.698	ENSOMEG00000018686	si:ch211-11k18.4	86	62.698	Oryzias_melastigma
ENSCING00000020807	-	91	61.449	ENSPKIG00000024621	si:dkey-98f17.5	77	61.449	Paramormyrops_kingsleyae
ENSCING00000020807	-	99	60.800	ENSPKIG00000023918	-	82	60.800	Paramormyrops_kingsleyae
ENSCING00000020807	-	99	61.273	ENSPKIG00000018807	si:ch211-11k18.4	87	61.968	Paramormyrops_kingsleyae
ENSCING00000020807	-	95	61.838	ENSPMGG00000019065	si:dkey-98f17.5	80	61.838	Periophthalmus_magnuspinnatus
ENSCING00000020807	-	98	63.636	ENSPMGG00000016507	si:ch211-11k18.4	83	63.636	Periophthalmus_magnuspinnatus
ENSCING00000020807	-	99	61.273	ENSPFOG00000007976	si:ch211-11k18.4	83	61.273	Poecilia_formosa
ENSCING00000020807	-	94	60.167	ENSPFOG00000015142	si:dkey-98f17.5	79	60.167	Poecilia_formosa
ENSCING00000020807	-	99	61.273	ENSPLAG00000019794	si:ch211-11k18.4	83	61.273	Poecilia_latipinna
ENSCING00000020807	-	94	60.112	ENSPLAG00000003709	si:dkey-98f17.5	79	60.112	Poecilia_latipinna
ENSCING00000020807	-	94	60.393	ENSPMEG00000018709	si:dkey-98f17.5	75	60.393	Poecilia_mexicana
ENSCING00000020807	-	99	61.008	ENSPMEG00000024198	si:ch211-11k18.4	87	61.008	Poecilia_mexicana
ENSCING00000020807	-	99	61.008	ENSPREG00000015319	si:ch211-11k18.4	86	61.008	Poecilia_reticulata
ENSCING00000020807	-	92	61.782	ENSPREG00000000708	si:dkey-98f17.5	81	61.782	Poecilia_reticulata
ENSCING00000020807	-	94	62.079	ENSPNYG00000017266	si:dkey-98f17.5	79	62.079	Pundamilia_nyererei
ENSCING00000020807	-	99	62.069	ENSPNYG00000017099	si:ch211-11k18.4	83	62.069	Pundamilia_nyererei
ENSCING00000020807	-	97	59.401	ENSPNAG00000021352	si:dkey-98f17.5	81	59.401	Pygocentrus_nattereri
ENSCING00000020807	-	99	61.702	ENSPNAG00000022138	si:ch211-11k18.4	83	61.702	Pygocentrus_nattereri
ENSCING00000020807	-	99	61.436	ENSSFOG00015000985	si:ch211-11k18.4	79	61.436	Scleropages_formosus
ENSCING00000020807	-	83	61.783	ENSSFOG00015017965	si:dkey-98f17.5	69	61.783	Scleropages_formosus
ENSCING00000020807	-	99	60.477	ENSSMAG00000009651	si:ch211-11k18.4	83	60.477	Scophthalmus_maximus
ENSCING00000020807	-	95	61.003	ENSSMAG00000011905	si:dkey-98f17.5	81	61.003	Scophthalmus_maximus
ENSCING00000020807	-	99	62.698	ENSSDUG00000016411	si:ch211-11k18.4	83	62.698	Seriola_dumerili
ENSCING00000020807	-	98	58.649	ENSSDUG00000013457	si:dkey-98f17.5	82	58.649	Seriola_dumerili
ENSCING00000020807	-	99	62.434	ENSSLDG00000019145	si:ch211-11k18.4	83	62.434	Seriola_lalandi_dorsalis
ENSCING00000020807	-	91	61.739	ENSSLDG00000025395	si:dkey-98f17.5	77	61.739	Seriola_lalandi_dorsalis
ENSCING00000020807	-	70	68.182	ENSSPUG00000010096	-	81	60.625	Sphenodon_punctatus
ENSCING00000020807	-	97	61.308	ENSSPAG00000018800	si:dkey-98f17.5	81	61.308	Stegastes_partitus
ENSCING00000020807	-	99	61.008	ENSSPAG00000010697	si:ch211-11k18.4	83	61.008	Stegastes_partitus
ENSCING00000020807	-	98	61.559	ENSTRUG00000020291	si:ch211-11k18.4	82	61.559	Takifugu_rubripes
ENSCING00000020807	-	97	59.673	ENSTRUG00000021287	si:dkey-98f17.5	81	59.673	Takifugu_rubripes
ENSCING00000020807	-	96	61.685	ENSXETG00000031783	-	81	61.685	Xenopus_tropicalis
ENSCING00000020807	-	98	61.765	ENSXCOG00000018094	si:ch211-11k18.4	84	61.765	Xiphophorus_couchianus
ENSCING00000020807	-	91	62.029	ENSXCOG00000017002	si:dkey-98f17.5	77	62.029	Xiphophorus_couchianus
ENSCING00000020807	-	99	61.273	ENSXMAG00000021235	si:ch211-11k18.4	84	61.765	Xiphophorus_maculatus
ENSCING00000020807	-	91	62.029	ENSXMAG00000007688	si:dkey-98f17.5	73	62.029	Xiphophorus_maculatus