EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020813 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1056 bases
Position: chr7:1411266-1412321
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000029856	G-patch	PF01585.23	4.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031673	-	1020	-	ENSCINP00000029856	340 (aa)	-	H2XJM4

Gene Model

Click here to download ENSCING00000020813's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020813's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020813	-	96	33.333	ENSG00000068394	GPKOW	61	36.455	Homo_sapiens
ENSCING00000020813	-	78	40.268	ENSAPOG00000004970	gpkow	58	40.268	Acanthochromis_polyacanthus
ENSCING00000020813	-	92	35.057	ENSAMEG00000012303	GPKOW	66	35.366	Ailuropoda_melanoleuca
ENSCING00000020813	-	93	38.936	ENSACIG00000010755	gpkow	70	38.843	Amphilophus_citrinellus
ENSCING00000020813	-	93	38.506	ENSAOCG00000022818	gpkow	57	41.611	Amphiprion_ocellaris
ENSCING00000020813	-	78	41.611	ENSAPEG00000021416	gpkow	59	41.611	Amphiprion_percula
ENSCING00000020813	-	94	36.464	ENSATEG00000023744	gpkow	57	39.867	Anabas_testudineus
ENSCING00000020813	-	88	38.323	ENSACAG00000016598	GPKOW	69	36.390	Anolis_carolinensis
ENSCING00000020813	-	79	32.203	ENSANAG00000036571	-	58	33.984	Aotus_nancymaae
ENSCING00000020813	-	88	34.036	ENSANAG00000030473	-	60	35.836	Aotus_nancymaae
ENSCING00000020813	-	77	39.100	ENSAMXG00000039266	gpkow	86	39.100	Astyanax_mexicanus
ENSCING00000020813	-	96	35.813	ENSBTAG00000002568	GPKOW	66	35.780	Bos_taurus
ENSCING00000020813	-	96	32.873	ENSCJAG00000002656	GPKOW	60	35.154	Callithrix_jacchus
ENSCING00000020813	-	98	34.483	ENSCAFG00000015794	GPKOW	66	34.545	Canis_familiaris
ENSCING00000020813	-	98	34.483	ENSCAFG00020020258	GPKOW	66	34.545	Canis_lupus_dingo
ENSCING00000020813	-	96	36.288	ENSCHIG00000013277	GPKOW	65	36.308	Capra_hircus
ENSCING00000020813	-	88	34.835	ENSTSYG00000033182	-	61	36.455	Carlito_syrichta
ENSCING00000020813	-	78	34.783	ENSTSYG00000029374	-	61	34.783	Carlito_syrichta
ENSCING00000020813	-	73	35.357	ENSCAPG00000011329	GPKOW	62	36.735	Cavia_aperea
ENSCING00000020813	-	96	34.795	ENSCPOG00000013270	GPKOW	67	35.758	Cavia_porcellus
ENSCING00000020813	-	88	32.938	ENSCCAG00000022161	-	63	34.333	Cebus_capucinus
ENSCING00000020813	-	88	33.735	ENSCCAG00000034660	-	63	35.570	Cebus_capucinus
ENSCING00000020813	-	88	34.234	ENSCATG00000041433	GPKOW	61	36.120	Cercocebus_atys
ENSCING00000020813	-	93	33.051	ENSCLAG00000007117	-	58	34.219	Chinchilla_lanigera
ENSCING00000020813	-	95	33.884	ENSCLAG00000002220	-	60	36.242	Chinchilla_lanigera
ENSCING00000020813	-	88	33.934	ENSCSAG00000012926	GPKOW	61	35.786	Chlorocebus_sabaeus
ENSCING00000020813	-	82	36.334	ENSCPBG00000016609	GPKOW	60	36.334	Chrysemys_picta_bellii
ENSCING00000020813	-	78	35.452	ENSCANG00000037595	GPKOW	61	35.452	Colobus_angolensis_palliatus
ENSCING00000020813	-	97	32.410	ENSCGRG00001016210	Gpkow	65	33.742	Cricetulus_griseus_chok1gshd
ENSCING00000020813	-	97	32.410	ENSCGRG00000013835	Gpkow	65	33.742	Cricetulus_griseus_crigri
ENSCING00000020813	-	79	41.234	ENSCSEG00000020569	gpkow	59	41.234	Cynoglossus_semilaevis
ENSCING00000020813	-	90	39.244	ENSCVAG00000017066	gpkow	59	42.193	Cyprinodon_variegatus
ENSCING00000020813	-	93	37.079	ENSDARG00000029612	gpkow	66	37.151	Danio_rerio
ENSCING00000020813	-	93	32.768	ENSDNOG00000016647	GPKOW	60	36.027	Dasypus_novemcinctus
ENSCING00000020813	-	94	33.051	ENSDORG00000013663	Gpkow	66	34.043	Dipodomys_ordii
ENSCING00000020813	-	97	34.986	ENSEBUG00000001912	gpkow	71	37.459	Eptatretus_burgeri
ENSCING00000020813	-	96	32.033	ENSEASG00005019852	GPKOW	59	33.898	Equus_asinus_asinus
ENSCING00000020813	-	96	34.426	ENSECAG00000018251	GPKOW	66	35.152	Equus_caballus
ENSCING00000020813	-	80	35.974	ENSEEUG00000008839	GPKOW	58	36.879	Erinaceus_europaeus
ENSCING00000020813	-	78	37.013	ENSELUG00000022223	gpkow	68	34.840	Esox_lucius
ENSCING00000020813	-	96	36.088	ENSFCAG00000003818	GPKOW	61	37.458	Felis_catus
ENSCING00000020813	-	88	36.145	ENSFDAG00000001669	GPKOW	60	37.584	Fukomys_damarensis
ENSCING00000020813	-	96	37.057	ENSFHEG00000022349	gpkow	57	40.461	Fundulus_heteroclitus
ENSCING00000020813	-	81	37.742	ENSGMOG00000019661	gpkow	67	37.742	Gadus_morhua
ENSCING00000020813	-	84	38.438	ENSGACG00000012127	gpkow	92	38.438	Gasterosteus_aculeatus
ENSCING00000020813	-	77	32.852	ENSGAGG00000006302	GPKOW	57	35.622	Gopherus_agassizii
ENSCING00000020813	-	96	33.058	ENSGGOG00000013685	GPKOW	64	36.120	Gorilla_gorilla
ENSCING00000020813	-	93	37.293	ENSHBUG00000010655	gpkow	57	39.458	Haplochromis_burtoni
ENSCING00000020813	-	96	34.254	ENSHGLG00000002746	GPKOW	60	36.700	Heterocephalus_glaber_female
ENSCING00000020813	-	96	34.341	ENSHGLG00100014283	GPKOW	60	36.789	Heterocephalus_glaber_male
ENSCING00000020813	-	78	39.333	ENSIPUG00000008342	gpkow	68	35.989	Ictalurus_punctatus
ENSCING00000020813	-	88	36.036	ENSSTOG00000014593	GPKOW	60	37.874	Ictidomys_tridecemlineatus
ENSCING00000020813	-	90	33.714	ENSJJAG00000013397	Gpkow	59	35.216	Jaculus_jaculus
ENSCING00000020813	-	93	36.490	ENSKMAG00000006241	gpkow	68	36.022	Kryptolebias_marmoratus
ENSCING00000020813	-	97	37.027	ENSLBEG00000013238	gpkow	68	37.293	Labrus_bergylta
ENSCING00000020813	-	91	35.946	ENSLOCG00000014776	gpkow	67	36.261	Lepisosteus_oculatus
ENSCING00000020813	-	93	35.311	ENSLAFG00000005896	GPKOW	66	35.780	Loxodonta_africana
ENSCING00000020813	-	88	34.234	ENSMFAG00000035346	GPKOW	61	36.120	Macaca_fascicularis
ENSCING00000020813	-	88	34.234	ENSMMUG00000020557	GPKOW	59	36.120	Macaca_mulatta
ENSCING00000020813	-	88	34.234	ENSMNEG00000004803	GPKOW	61	36.120	Macaca_nemestrina
ENSCING00000020813	-	88	34.234	ENSMLEG00000033293	GPKOW	61	36.120	Mandrillus_leucophaeus
ENSCING00000020813	-	78	41.391	ENSMAMG00000024235	gpkow	58	41.391	Mastacembelus_armatus
ENSCING00000020813	-	93	37.017	ENSMZEG00005026357	gpkow	57	39.157	Maylandia_zebra
ENSCING00000020813	-	88	35.015	ENSMICG00000045083	GPKOW	61	36.304	Microcebus_murinus
ENSCING00000020813	-	98	32.609	ENSMOCG00000019251	Gpkow	65	33.333	Microtus_ochrogaster
ENSCING00000020813	-	98	33.429	ENSMODG00000023705	-	62	37.367	Monodelphis_domestica
ENSCING00000020813	-	89	34.824	ENSMODG00000011443	-	66	37.500	Monodelphis_domestica
ENSCING00000020813	-	93	35.112	ENSMALG00000015148	gpkow	66	35.112	Monopterus_albus
ENSCING00000020813	-	88	33.923	MGP_CAROLIEiJ_G0032893	Gpkow	70	34.043	Mus_caroli
ENSCING00000020813	-	93	33.994	ENSMUSG00000031148	Gpkow	65	34.043	Mus_musculus
ENSCING00000020813	-	88	34.218	MGP_PahariEiJ_G0031441	Gpkow	65	34.347	Mus_pahari
ENSCING00000020813	-	98	34.218	ENSMPUG00000013808	GPKOW	59	36.577	Mustela_putorius_furo
ENSCING00000020813	-	70	35.316	ENSMLUG00000009281	-	85	35.316	Myotis_lucifugus
ENSCING00000020813	-	88	32.743	ENSNGAG00000005382	Gpkow	66	32.432	Nannospalax_galili
ENSCING00000020813	-	93	37.778	ENSNBRG00000008941	gpkow	71	37.815	Neolamprologus_brichardi
ENSCING00000020813	-	78	34.783	ENSNLEG00000007998	GPKOW	61	34.783	Nomascus_leucogenys
ENSCING00000020813	-	93	37.190	ENSONIG00000016834	gpkow	57	39.339	Oreochromis_niloticus
ENSCING00000020813	-	96	32.533	ENSOCUG00000010422	GPKOW	65	33.739	Oryctolagus_cuniculus
ENSCING00000020813	-	78	39.333	ENSORLG00000014442	gpkow	67	35.946	Oryzias_latipes
ENSCING00000020813	-	78	39.274	ENSORLG00020012795	gpkow	67	36.119	Oryzias_latipes_hni
ENSCING00000020813	-	78	40.132	ENSORLG00015006852	gpkow	67	36.119	Oryzias_latipes_hsok
ENSCING00000020813	-	98	36.658	ENSOMEG00000003236	gpkow	63	39.934	Oryzias_melastigma
ENSCING00000020813	-	96	36.288	ENSOARG00000010927	GPKOW	65	36.308	Ovis_aries
ENSCING00000020813	-	88	34.535	ENSPPAG00000040116	GPKOW	61	36.455	Pan_paniscus
ENSCING00000020813	-	96	35.813	ENSPPRG00000016972	GPKOW	61	37.124	Panthera_pardus
ENSCING00000020813	-	96	35.912	ENSPTIG00000008398	GPKOW	66	35.583	Panthera_tigris_altaica
ENSCING00000020813	-	88	34.535	ENSPTRG00000047603	GPKOW	61	36.455	Pan_troglodytes
ENSCING00000020813	-	88	34.234	ENSPANG00000013477	GPKOW	61	36.120	Papio_anubis
ENSCING00000020813	-	79	39.677	ENSPKIG00000008382	gpkow	59	39.677	Paramormyrops_kingsleyae
ENSCING00000020813	-	93	40.710	ENSPMGG00000010880	gpkow	69	39.305	Periophthalmus_magnuspinnatus
ENSCING00000020813	-	90	33.718	ENSPEMG00000009966	Gpkow	67	33.134	Peromyscus_maniculatus_bairdii
ENSCING00000020813	-	79	42.904	ENSPMAG00000003497	gpkow	68	38.649	Petromyzon_marinus
ENSCING00000020813	-	93	37.931	ENSPFOG00000003065	gpkow	67	38.227	Poecilia_formosa
ENSCING00000020813	-	93	37.931	ENSPLAG00000023097	gpkow	67	38.227	Poecilia_latipinna
ENSCING00000020813	-	93	38.218	ENSPMEG00000002762	gpkow	67	38.504	Poecilia_mexicana
ENSCING00000020813	-	51	41.304	ENSPREG00000002671	gpkow	59	41.117	Poecilia_reticulata
ENSCING00000020813	-	77	36.735	ENSPPYG00000020334	-	76	36.735	Pongo_abelii
ENSCING00000020813	-	88	35.312	ENSPCOG00000008505	GPKOW	61	36.964	Propithecus_coquereli
ENSCING00000020813	-	93	37.222	ENSPNYG00000014523	gpkow	69	37.838	Pundamilia_nyererei
ENSCING00000020813	-	78	38.538	ENSPNAG00000008360	gpkow	68	35.422	Pygocentrus_nattereri
ENSCING00000020813	-	88	34.024	ENSRNOG00000022939	Gpkow	65	34.146	Rattus_norvegicus
ENSCING00000020813	-	83	34.615	ENSRBIG00000027885	GPKOW	60	36.691	Rhinopithecus_bieti
ENSCING00000020813	-	88	33.934	ENSRROG00000037604	GPKOW	61	35.786	Rhinopithecus_roxellana
ENSCING00000020813	-	73	34.643	ENSSBOG00000024861	-	61	34.643	Saimiri_boliviensis_boliviensis
ENSCING00000020813	-	78	35.235	ENSSBOG00000032042	-	61	35.235	Saimiri_boliviensis_boliviensis
ENSCING00000020813	-	92	37.429	ENSSFOG00015009901	gpkow	62	38.110	Scleropages_formosus
ENSCING00000020813	-	79	41.137	ENSSMAG00000013323	gpkow	58	41.472	Scophthalmus_maximus
ENSCING00000020813	-	78	39.542	ENSSDUG00000023134	gpkow	58	39.542	Seriola_dumerili
ENSCING00000020813	-	78	39.542	ENSSLDG00000024756	gpkow	58	39.542	Seriola_lalandi_dorsalis
ENSCING00000020813	-	63	35.918	ENSSARG00000003351	GPKOW	57	35.918	Sorex_araneus
ENSCING00000020813	-	93	38.000	ENSSPAG00000015503	gpkow	69	38.286	Stegastes_partitus
ENSCING00000020813	-	88	35.629	ENSSSCG00000012291	GPKOW	66	35.061	Sus_scrofa
ENSCING00000020813	-	96	37.637	ENSTRUG00000000616	gpkow	63	38.532	Takifugu_rubripes
ENSCING00000020813	-	95	38.793	ENSTNIG00000012502	gpkow	60	41.781	Tetraodon_nigroviridis
ENSCING00000020813	-	96	34.349	ENSTTRG00000008579	GPKOW	61	36.364	Tursiops_truncatus
ENSCING00000020813	-	98	35.561	ENSUAMG00000026502	GPKOW	73	35.474	Ursus_americanus
ENSCING00000020813	-	92	36.000	ENSUMAG00000007072	GPKOW	59	36.304	Ursus_maritimus
ENSCING00000020813	-	98	34.483	ENSVVUG00000017815	GPKOW	66	34.545	Vulpes_vulpes
ENSCING00000020813	-	86	38.650	ENSXETG00000007727	gpkow	65	38.650	Xenopus_tropicalis
ENSCING00000020813	-	93	37.752	ENSXCOG00000014306	gpkow	68	37.500	Xiphophorus_couchianus
ENSCING00000020813	-	93	37.752	ENSXMAG00000018216	gpkow	67	37.673	Xiphophorus_maculatus