EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020906 (Gene tree)
Gene ID: 100186931
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2015 bases
Position: chr11:4940070-4942084
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000035292	Sas10_Utp3	PF04000.15	1.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000032829	-	859	-	ENSCINP00000035292	191 (aa)	-	H2Y058

Gene Model

Click here to download ENSCING00000020906's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020906's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020906	-	64	41.803	ENSG00000197223	C1D	86	42.149	Homo_sapiens
ENSCING00000020906	-	74	43.448	ENSAPOG00000005466	c1d	78	47.414	Acanthochromis_polyacanthus
ENSCING00000020906	-	64	41.803	ENSAMEG00000004859	C1D	83	42.149	Ailuropoda_melanoleuca
ENSCING00000020906	-	63	48.760	ENSACIG00000012684	c1d	75	47.414	Amphilophus_citrinellus
ENSCING00000020906	-	75	44.218	ENSAOCG00000020354	c1d	80	46.610	Amphiprion_ocellaris
ENSCING00000020906	-	75	44.218	ENSAPEG00000001403	c1d	77	46.610	Amphiprion_percula
ENSCING00000020906	-	82	42.308	ENSATEG00000012922	c1d	95	40.385	Anabas_testudineus
ENSCING00000020906	-	61	48.718	ENSAPLG00000009320	C1D	80	49.138	Anas_platyrhynchos
ENSCING00000020906	-	61	46.154	ENSACAG00000001337	C1D	95	46.552	Anolis_carolinensis
ENSCING00000020906	-	64	41.803	ENSANAG00000005773	-	86	42.149	Aotus_nancymaae
ENSCING00000020906	-	64	42.623	ENSANAG00000035972	-	86	42.975	Aotus_nancymaae
ENSCING00000020906	-	60	46.957	ENSACLG00000026206	c1d	77	46.957	Astatotilapia_calliptera
ENSCING00000020906	-	66	42.063	ENSAMXG00000043212	c1d	79	43.103	Astyanax_mexicanus
ENSCING00000020906	-	64	41.803	ENSBTAG00000049002	C1D	86	42.149	Bos_taurus
ENSCING00000020906	-	60	38.261	ENSCJAG00000044668	-	90	38.261	Callithrix_jacchus
ENSCING00000020906	-	64	41.803	ENSCJAG00000006589	C1D	80	42.149	Callithrix_jacchus
ENSCING00000020906	-	62	42.857	ENSCAFG00000030099	C1D	84	43.220	Canis_familiaris
ENSCING00000020906	-	62	42.857	ENSCAFG00020026997	C1D	84	43.220	Canis_lupus_dingo
ENSCING00000020906	-	64	41.803	ENSCHIG00000025729	C1D	86	42.149	Capra_hircus
ENSCING00000020906	-	64	41.803	ENSTSYG00000035739	-	86	42.149	Carlito_syrichta
ENSCING00000020906	-	59	41.071	ENSTSYG00000026573	-	71	41.071	Carlito_syrichta
ENSCING00000020906	-	57	37.963	ENSCAPG00000011523	-	90	37.963	Cavia_aperea
ENSCING00000020906	-	57	37.963	ENSCPOG00000020112	-	90	37.963	Cavia_porcellus
ENSCING00000020906	-	62	43.697	ENSCPOG00000037986	-	84	44.068	Cavia_porcellus
ENSCING00000020906	-	64	41.803	ENSCCAG00000030405	-	86	42.149	Cebus_capucinus
ENSCING00000020906	-	62	41.176	ENSCATG00000043348	-	84	41.525	Cercocebus_atys
ENSCING00000020906	-	64	41.803	ENSCATG00000045336	C1D	86	42.149	Cercocebus_atys
ENSCING00000020906	-	64	41.803	ENSCLAG00000011883	C1D	86	42.149	Chinchilla_lanigera
ENSCING00000020906	-	64	41.803	ENSCSAG00000014811	C1D	86	42.149	Chlorocebus_sabaeus
ENSCING00000020906	-	64	41.803	ENSCHOG00000006719	C1D	68	42.149	Choloepus_hoffmanni
ENSCING00000020906	-	61	46.154	ENSCPBG00000014451	C1D	78	46.552	Chrysemys_picta_bellii
ENSCING00000020906	-	71	71.111	ENSCSAVG00000000150	-	68	76.471	Ciona_savignyi
ENSCING00000020906	-	64	41.803	ENSCANG00000035564	C1D	86	42.149	Colobus_angolensis_palliatus
ENSCING00000020906	-	53	42.574	ENSCANG00000036599	-	82	42.574	Colobus_angolensis_palliatus
ENSCING00000020906	-	64	42.623	ENSCGRG00001023376	C1d	86	42.975	Cricetulus_griseus_chok1gshd
ENSCING00000020906	-	64	42.623	ENSCGRG00000010245	C1d	86	42.975	Cricetulus_griseus_crigri
ENSCING00000020906	-	64	45.902	ENSCSEG00000000587	c1d	81	46.552	Cynoglossus_semilaevis
ENSCING00000020906	-	82	42.038	ENSCVAG00000004603	c1d	78	44.068	Cyprinodon_variegatus
ENSCING00000020906	-	62	51.220	ENSDARG00000021112	c1d	83	51.220	Danio_rerio
ENSCING00000020906	-	64	36.885	ENSDNOG00000046068	-	86	37.190	Dasypus_novemcinctus
ENSCING00000020906	-	66	40.157	ENSDORG00000003300	C1d	86	40.496	Dipodomys_ordii
ENSCING00000020906	-	62	42.373	ENSEBUG00000006874	c1d	74	42.373	Eptatretus_burgeri
ENSCING00000020906	-	62	42.017	ENSEASG00005007307	C1D	77	42.373	Equus_asinus_asinus
ENSCING00000020906	-	62	42.017	ENSECAG00000002187	C1D	84	42.373	Equus_caballus
ENSCING00000020906	-	64	41.732	ENSELUG00000014823	c1d	84	43.089	Esox_lucius
ENSCING00000020906	-	64	41.803	ENSFCAG00000028933	C1D	86	42.149	Felis_catus
ENSCING00000020906	-	61	45.299	ENSFALG00000013640	C1D	70	45.690	Ficedula_albicollis
ENSCING00000020906	-	63	38.525	ENSFDAG00000014175	-	84	38.525	Fukomys_damarensis
ENSCING00000020906	-	63	42.149	ENSFDAG00000010462	-	86	42.149	Fukomys_damarensis
ENSCING00000020906	-	64	44.262	ENSFHEG00000010545	c1d	81	44.828	Fundulus_heteroclitus
ENSCING00000020906	-	63	42.500	ENSGMOG00000013911	-	92	43.103	Gadus_morhua
ENSCING00000020906	-	61	47.863	ENSGALG00000008765	C1D	81	48.276	Gallus_gallus
ENSCING00000020906	-	71	48.551	ENSGAFG00000012578	c1d	74	48.276	Gambusia_affinis
ENSCING00000020906	-	61	49.573	ENSGACG00000011981	c1d	91	49.138	Gasterosteus_aculeatus
ENSCING00000020906	-	61	46.154	ENSGAGG00000013383	C1D	78	46.552	Gopherus_agassizii
ENSCING00000020906	-	61	44.444	ENSGGOG00000025808	-	67	44.828	Gorilla_gorilla
ENSCING00000020906	-	64	41.803	ENSGGOG00000025982	-	67	42.149	Gorilla_gorilla
ENSCING00000020906	-	64	40.164	ENSGGOG00000022296	-	86	40.496	Gorilla_gorilla
ENSCING00000020906	-	62	46.218	ENSHBUG00000018531	c1d	71	46.218	Haplochromis_burtoni
ENSCING00000020906	-	63	41.667	ENSHGLG00000021219	-	85	41.667	Heterocephalus_glaber_female
ENSCING00000020906	-	63	43.802	ENSHGLG00000012332	-	86	43.802	Heterocephalus_glaber_female
ENSCING00000020906	-	63	42.500	ENSHGLG00100019951	-	85	42.500	Heterocephalus_glaber_male
ENSCING00000020906	-	63	43.802	ENSHGLG00100000221	-	86	43.802	Heterocephalus_glaber_male
ENSCING00000020906	-	65	45.968	ENSHCOG00000014568	C1D	81	45.378	Hippocampus_comes
ENSCING00000020906	-	65	45.968	ENSHCOG00000014589	c1d	81	45.378	Hippocampus_comes
ENSCING00000020906	-	64	42.623	ENSIPUG00000018661	c1d	80	43.103	Ictalurus_punctatus
ENSCING00000020906	-	62	42.017	ENSSTOG00000012346	C1D	84	42.373	Ictidomys_tridecemlineatus
ENSCING00000020906	-	60	44.348	ENSJJAG00000023186	-	88	44.348	Jaculus_jaculus
ENSCING00000020906	-	64	40.164	ENSJJAG00000005044	-	88	40.496	Jaculus_jaculus
ENSCING00000020906	-	64	39.344	ENSJJAG00000016086	-	86	39.669	Jaculus_jaculus
ENSCING00000020906	-	64	40.984	ENSJJAG00000009540	-	88	41.322	Jaculus_jaculus
ENSCING00000020906	-	68	44.697	ENSKMAG00000015077	c1d	75	45.690	Kryptolebias_marmoratus
ENSCING00000020906	-	81	41.935	ENSLBEG00000008351	c1d	75	44.828	Labrus_bergylta
ENSCING00000020906	-	73	45.324	ENSLACG00000007516	C1D	78	50.000	Latimeria_chalumnae
ENSCING00000020906	-	62	47.458	ENSLOCG00000016024	c1d	79	48.276	Lepisosteus_oculatus
ENSCING00000020906	-	62	42.017	ENSLAFG00000002083	C1D	84	42.373	Loxodonta_africana
ENSCING00000020906	-	62	40.336	ENSMFAG00000034034	-	84	40.678	Macaca_fascicularis
ENSCING00000020906	-	64	41.803	ENSMFAG00000028681	-	86	42.149	Macaca_fascicularis
ENSCING00000020906	-	64	41.803	ENSMFAG00000034261	C1D	86	42.149	Macaca_fascicularis
ENSCING00000020906	-	63	42.149	ENSMMUG00000017209	-	86	42.149	Macaca_mulatta
ENSCING00000020906	-	64	41.803	ENSMMUG00000041557	C1D	87	42.149	Macaca_mulatta
ENSCING00000020906	-	62	40.336	ENSMMUG00000043184	-	84	40.678	Macaca_mulatta
ENSCING00000020906	-	62	40.336	ENSMNEG00000020626	-	84	40.678	Macaca_nemestrina
ENSCING00000020906	-	64	41.803	ENSMNEG00000040612	C1D	86	42.149	Macaca_nemestrina
ENSCING00000020906	-	62	41.176	ENSMLEG00000028412	-	84	41.525	Mandrillus_leucophaeus
ENSCING00000020906	-	64	41.803	ENSMLEG00000027619	C1D	86	42.149	Mandrillus_leucophaeus
ENSCING00000020906	-	64	46.721	ENSMAMG00000022156	c1d	95	41.290	Mastacembelus_armatus
ENSCING00000020906	-	62	46.218	ENSMZEG00005027343	c1d	82	46.218	Maylandia_zebra
ENSCING00000020906	-	61	47.863	ENSMGAG00000004517	C1D	82	48.276	Meleagris_gallopavo
ENSCING00000020906	-	64	42.623	ENSMAUG00000008974	C1d	86	42.975	Mesocricetus_auratus
ENSCING00000020906	-	64	42.623	ENSMICG00000032141	C1D	86	42.975	Microcebus_murinus
ENSCING00000020906	-	64	42.623	ENSMOCG00000010860	C1d	86	42.975	Microtus_ochrogaster
ENSCING00000020906	-	64	48.780	ENSMMOG00000007332	c1d	79	47.009	Mola_mola
ENSCING00000020906	-	62	46.610	ENSMODG00000003561	C1D	82	47.414	Monodelphis_domestica
ENSCING00000020906	-	81	44.516	ENSMALG00000020864	c1d	87	48.673	Monopterus_albus
ENSCING00000020906	-	64	42.623	MGP_CAROLIEiJ_G0016110	C1d	98	43.966	Mus_caroli
ENSCING00000020906	-	64	42.623	ENSMUSG00000000581	C1d	98	43.966	Mus_musculus
ENSCING00000020906	-	64	42.623	MGP_PahariEiJ_G0016781	C1d	98	43.966	Mus_pahari
ENSCING00000020906	-	64	42.623	MGP_SPRETEiJ_G0016952	C1d	98	43.966	Mus_spretus
ENSCING00000020906	-	64	41.803	ENSMPUG00000006224	C1D	86	42.149	Mustela_putorius_furo
ENSCING00000020906	-	62	42.017	ENSMLUG00000029990	-	84	42.373	Myotis_lucifugus
ENSCING00000020906	-	62	42.857	ENSMLUG00000024947	-	84	43.220	Myotis_lucifugus
ENSCING00000020906	-	62	42.857	ENSMLUG00000010791	-	84	43.220	Myotis_lucifugus
ENSCING00000020906	-	63	42.500	ENSNGAG00000016675	-	85	42.500	Nannospalax_galili
ENSCING00000020906	-	66	42.520	ENSNGAG00000011872	-	86	42.975	Nannospalax_galili
ENSCING00000020906	-	56	41.121	ENSNGAG00000012482	-	82	42.718	Nannospalax_galili
ENSCING00000020906	-	62	47.059	ENSNBRG00000010704	c1d	82	47.059	Neolamprologus_brichardi
ENSCING00000020906	-	64	41.803	ENSNLEG00000032919	-	67	42.149	Nomascus_leucogenys
ENSCING00000020906	-	64	41.803	ENSOPRG00000009586	C1D	86	42.149	Ochotona_princeps
ENSCING00000020906	-	64	41.803	ENSODEG00000011242	-	86	42.149	Octodon_degus
ENSCING00000020906	-	66	37.008	ENSODEG00000018525	-	82	38.793	Octodon_degus
ENSCING00000020906	-	64	41.803	ENSODEG00000018885	-	87	42.149	Octodon_degus
ENSCING00000020906	-	61	46.552	ENSONIG00000001233	c1d	77	46.552	Oreochromis_niloticus
ENSCING00000020906	-	64	43.443	ENSOCUG00000025587	-	86	43.802	Oryctolagus_cuniculus
ENSCING00000020906	-	64	43.443	ENSOCUG00000009771	-	86	43.802	Oryctolagus_cuniculus
ENSCING00000020906	-	73	45.455	ENSORLG00000021968	c1d	75	46.154	Oryzias_latipes
ENSCING00000020906	-	73	44.755	ENSORLG00020000507	c1d	76	46.154	Oryzias_latipes_hni
ENSCING00000020906	-	73	43.357	ENSORLG00015004594	c1d	75	45.299	Oryzias_latipes_hsok
ENSCING00000020906	-	72	46.479	ENSOMEG00000004672	c1d	74	47.414	Oryzias_melastigma
ENSCING00000020906	-	64	40.164	ENSOGAG00000027934	-	86	40.496	Otolemur_garnettii
ENSCING00000020906	-	64	41.803	ENSOARG00000019931	C1D	85	42.149	Ovis_aries
ENSCING00000020906	-	64	41.803	ENSPPAG00000037847	-	86	42.149	Pan_paniscus
ENSCING00000020906	-	61	43.590	ENSPPAG00000040091	-	67	43.966	Pan_paniscus
ENSCING00000020906	-	64	41.803	ENSPPRG00000017045	-	86	42.149	Panthera_pardus
ENSCING00000020906	-	64	41.803	ENSPTIG00000009414	C1D	86	42.149	Panthera_tigris_altaica
ENSCING00000020906	-	64	41.803	ENSPTRG00000023558	C1D	86	42.149	Pan_troglodytes
ENSCING00000020906	-	62	41.176	ENSPANG00000000501	-	84	41.525	Papio_anubis
ENSCING00000020906	-	64	41.803	ENSPANG00000002886	C1D	67	42.149	Papio_anubis
ENSCING00000020906	-	74	43.537	ENSPKIG00000004877	c1d	83	49.194	Paramormyrops_kingsleyae
ENSCING00000020906	-	61	46.154	ENSPSIG00000010015	C1D	80	46.552	Pelodiscus_sinensis
ENSCING00000020906	-	64	45.902	ENSPMGG00000009326	c1d	75	46.154	Periophthalmus_magnuspinnatus
ENSCING00000020906	-	61	43.590	ENSPCIG00000006831	-	79	44.737	Phascolarctos_cinereus
ENSCING00000020906	-	62	46.610	ENSPCIG00000018629	-	82	47.414	Phascolarctos_cinereus
ENSCING00000020906	-	81	42.308	ENSPFOG00000003686	c1d	75	47.414	Poecilia_formosa
ENSCING00000020906	-	81	42.308	ENSPLAG00000000228	c1d	82	47.414	Poecilia_latipinna
ENSCING00000020906	-	81	42.308	ENSPMEG00000023213	c1d	75	47.414	Poecilia_mexicana
ENSCING00000020906	-	68	47.727	ENSPREG00000000742	c1d	82	47.414	Poecilia_reticulata
ENSCING00000020906	-	64	41.803	ENSPPYG00000012354	C1D	66	42.149	Pongo_abelii
ENSCING00000020906	-	62	42.017	ENSPPYG00000002294	-	84	42.373	Pongo_abelii
ENSCING00000020906	-	64	33.607	ENSPCAG00000010088	C1D	68	33.884	Procavia_capensis
ENSCING00000020906	-	64	42.623	ENSPCOG00000016112	C1D	86	42.975	Propithecus_coquereli
ENSCING00000020906	-	64	41.803	ENSPVAG00000012692	C1D	68	42.149	Pteropus_vampyrus
ENSCING00000020906	-	62	46.218	ENSPNYG00000008789	c1d	82	46.218	Pundamilia_nyererei
ENSCING00000020906	-	65	43.548	ENSPNAG00000004219	c1d	79	43.966	Pygocentrus_nattereri
ENSCING00000020906	-	64	43.443	ENSRNOG00000005982	C1d	86	43.802	Rattus_norvegicus
ENSCING00000020906	-	62	41.176	ENSRBIG00000026211	-	84	41.525	Rhinopithecus_bieti
ENSCING00000020906	-	64	41.803	ENSRROG00000029013	C1D	86	42.149	Rhinopithecus_roxellana
ENSCING00000020906	-	62	41.176	ENSRROG00000005944	-	84	41.525	Rhinopithecus_roxellana
ENSCING00000020906	-	64	41.803	ENSSBOG00000025275	C1D	86	42.149	Saimiri_boliviensis_boliviensis
ENSCING00000020906	-	64	46.341	ENSSHAG00000008352	C1D	56	48.276	Sarcophilus_harrisii
ENSCING00000020906	-	64	51.639	ENSSFOG00015010861	c1d	83	52.586	Scleropages_formosus
ENSCING00000020906	-	83	41.139	ENSSMAG00000019230	c1d	97	41.139	Scophthalmus_maximus
ENSCING00000020906	-	83	43.038	ENSSDUG00000020213	c1d	97	41.139	Seriola_dumerili
ENSCING00000020906	-	83	43.038	ENSSLDG00000017371	c1d	77	47.059	Seriola_lalandi_dorsalis
ENSCING00000020906	-	63	45.833	ENSSPUG00000006525	C1D	82	46.218	Sphenodon_punctatus
ENSCING00000020906	-	74	42.069	ENSSPAG00000008574	c1d	94	41.379	Stegastes_partitus
ENSCING00000020906	-	64	41.803	ENSSSCG00000039331	-	86	42.149	Sus_scrofa
ENSCING00000020906	-	59	37.168	ENSSSCG00000035701	-	94	37.168	Sus_scrofa
ENSCING00000020906	-	64	44.262	ENSTGUG00000002367	C1D	81	45.690	Taeniopygia_guttata
ENSCING00000020906	-	64	43.443	ENSTRUG00000012245	c1d	70	44.444	Takifugu_rubripes
ENSCING00000020906	-	64	44.715	ENSTNIG00000009827	c1d	80	44.915	Tetraodon_nigroviridis
ENSCING00000020906	-	62	42.017	ENSTBEG00000009797	C1D	84	42.373	Tupaia_belangeri
ENSCING00000020906	-	64	41.803	ENSTTRG00000013982	C1D	70	42.149	Tursiops_truncatus
ENSCING00000020906	-	61	41.026	ENSUAMG00000025246	C1D	81	41.026	Ursus_americanus
ENSCING00000020906	-	50	42.105	ENSUMAG00000006451	-	87	40.566	Ursus_maritimus
ENSCING00000020906	-	64	41.803	ENSUMAG00000021118	-	86	42.149	Ursus_maritimus
ENSCING00000020906	-	64	41.803	ENSVPAG00000012080	C1D	68	42.149	Vicugna_pacos
ENSCING00000020906	-	62	42.857	ENSVVUG00000027629	C1D	74	43.220	Vulpes_vulpes
ENSCING00000020906	-	61	46.154	ENSXETG00000025934	c1d	79	46.087	Xenopus_tropicalis
ENSCING00000020906	-	64	47.541	ENSXCOG00000013813	c1d	77	46.610	Xiphophorus_couchianus
ENSCING00000020906	-	64	48.361	ENSXMAG00000022273	c1d	77	47.458	Xiphophorus_maculatus