EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000020946 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 720 bases
Position: chr8:488081-488800
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000031508	Ribosomal_L16	PF00252.18	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000036584	-	549	-	ENSCINP00000031508	183 (aa)	-	H2XPC5

Gene Model

Click here to download ENSCING00000020946's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000020946's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000020946	-	85	39.103	ENSG00000166902	MRPL16	92	44.304	Homo_sapiens
ENSCING00000020946	-	85	39.103	ENSAPOG00000003818	mrpl16	60	39.103	Acanthochromis_polyacanthus
ENSCING00000020946	-	85	38.462	ENSAMEG00000014289	MRPL16	62	38.462	Ailuropoda_melanoleuca
ENSCING00000020946	-	85	40.385	ENSACIG00000022204	mrpl16	60	40.385	Amphilophus_citrinellus
ENSCING00000020946	-	85	40.385	ENSAOCG00000002647	mrpl16	60	40.385	Amphiprion_ocellaris
ENSCING00000020946	-	85	40.385	ENSAPEG00000020339	mrpl16	60	40.385	Amphiprion_percula
ENSCING00000020946	-	85	41.026	ENSATEG00000012565	mrpl16	60	41.026	Anabas_testudineus
ENSCING00000020946	-	85	39.103	ENSACAG00000009952	MRPL16	62	39.103	Anolis_carolinensis
ENSCING00000020946	-	85	38.462	ENSANAG00000029141	MRPL16	62	38.462	Aotus_nancymaae
ENSCING00000020946	-	85	39.744	ENSACLG00000024282	mrpl16	68	39.744	Astatotilapia_calliptera
ENSCING00000020946	-	87	38.750	ENSAMXG00000014688	mrpl16	66	38.750	Astyanax_mexicanus
ENSCING00000020946	-	85	41.026	ENSBTAG00000021188	MRPL16	62	41.026	Bos_taurus
ENSCING00000020946	-	94	34.857	WBGene00011412	mrpl-16	71	34.302	Caenorhabditis_elegans
ENSCING00000020946	-	85	39.744	ENSCJAG00000016306	MRPL16	62	39.744	Callithrix_jacchus
ENSCING00000020946	-	85	39.103	ENSCAFG00000031711	-	62	39.103	Canis_familiaris
ENSCING00000020946	-	85	39.103	ENSCAFG00000029686	-	62	39.103	Canis_familiaris
ENSCING00000020946	-	85	39.103	ENSCAFG00020000230	MRPL16	62	39.103	Canis_lupus_dingo
ENSCING00000020946	-	85	41.667	ENSCHIG00000012712	MRPL16	62	41.667	Capra_hircus
ENSCING00000020946	-	85	38.462	ENSTSYG00000013336	MRPL16	62	38.462	Carlito_syrichta
ENSCING00000020946	-	85	38.462	ENSCPOG00000005035	MRPL16	62	38.462	Cavia_porcellus
ENSCING00000020946	-	85	39.103	ENSCCAG00000035372	MRPL16	62	39.103	Cebus_capucinus
ENSCING00000020946	-	85	40.385	ENSCATG00000035790	MRPL16	62	40.385	Cercocebus_atys
ENSCING00000020946	-	85	39.103	ENSCLAG00000003811	MRPL16	64	39.103	Chinchilla_lanigera
ENSCING00000020946	-	85	39.103	ENSCSAG00000006107	MRPL16	62	39.103	Chlorocebus_sabaeus
ENSCING00000020946	-	83	40.789	ENSCHOG00000009976	MRPL16	75	40.789	Choloepus_hoffmanni
ENSCING00000020946	-	85	43.590	ENSCPBG00000009578	MRPL16	62	43.590	Chrysemys_picta_bellii
ENSCING00000020946	-	85	39.103	ENSCANG00000027375	MRPL16	62	39.103	Colobus_angolensis_palliatus
ENSCING00000020946	-	85	41.026	ENSCGRG00001000785	Mrpl16	62	41.026	Cricetulus_griseus_chok1gshd
ENSCING00000020946	-	85	41.026	ENSCGRG00000015073	Mrpl16	74	41.026	Cricetulus_griseus_crigri
ENSCING00000020946	-	85	39.744	ENSCSEG00000006169	mrpl16	60	39.744	Cynoglossus_semilaevis
ENSCING00000020946	-	85	38.462	ENSCVAG00000014885	mrpl16	61	38.462	Cyprinodon_variegatus
ENSCING00000020946	-	85	38.462	ENSCVAG00000013739	mrpl16	61	38.462	Cyprinodon_variegatus
ENSCING00000020946	-	85	38.462	ENSDARG00000075325	mrpl16	70	38.462	Danio_rerio
ENSCING00000020946	-	85	39.103	ENSDNOG00000034262	-	62	39.103	Dasypus_novemcinctus
ENSCING00000020946	-	85	39.103	ENSDORG00000024946	Mrpl16	62	39.103	Dipodomys_ordii
ENSCING00000020946	-	98	39.891	FBgn0023519	mRpL16	74	37.989	Drosophila_melanogaster
ENSCING00000020946	-	82	40.667	ENSETEG00000011252	MRPL16	60	40.667	Echinops_telfairi
ENSCING00000020946	-	97	41.573	ENSEBUG00000001257	mrpl16	69	41.573	Eptatretus_burgeri
ENSCING00000020946	-	85	39.103	ENSEASG00005007994	MRPL16	62	39.103	Equus_asinus_asinus
ENSCING00000020946	-	85	39.103	ENSECAG00000014926	MRPL16	62	39.103	Equus_caballus
ENSCING00000020946	-	85	41.026	ENSEEUG00000011076	MRPL16	62	41.026	Erinaceus_europaeus
ENSCING00000020946	-	85	44.231	ENSELUG00000002608	mrpl16	60	44.231	Esox_lucius
ENSCING00000020946	-	85	39.103	ENSFCAG00000007540	MRPL16	62	39.103	Felis_catus
ENSCING00000020946	-	85	42.308	ENSFALG00000012123	MRPL16	84	39.665	Ficedula_albicollis
ENSCING00000020946	-	85	40.385	ENSFDAG00000012285	MRPL16	67	40.385	Fukomys_damarensis
ENSCING00000020946	-	89	38.037	ENSFHEG00000015359	mrpl16	62	38.037	Fundulus_heteroclitus
ENSCING00000020946	-	56	43.689	ENSGMOG00000008546	mrpl16	54	43.689	Gadus_morhua
ENSCING00000020946	-	87	41.875	ENSGALG00000029419	MRPL16	80	41.875	Gallus_gallus
ENSCING00000020946	-	85	40.385	ENSGAFG00000012264	mrpl16	60	40.385	Gambusia_affinis
ENSCING00000020946	-	85	39.355	ENSGACG00000015363	mrpl16	60	39.355	Gasterosteus_aculeatus
ENSCING00000020946	-	85	42.308	ENSGAGG00000023594	MRPL16	62	42.308	Gopherus_agassizii
ENSCING00000020946	-	85	39.744	ENSGGOG00000015703	MRPL16	62	39.744	Gorilla_gorilla
ENSCING00000020946	-	85	39.103	ENSHBUG00000001596	mrpl16	60	39.103	Haplochromis_burtoni
ENSCING00000020946	-	85	39.103	ENSHGLG00000010777	MRPL16	62	39.103	Heterocephalus_glaber_female
ENSCING00000020946	-	85	39.103	ENSHGLG00100010477	MRPL16	62	39.103	Heterocephalus_glaber_male
ENSCING00000020946	-	85	41.026	ENSHCOG00000003499	mrpl16	67	41.026	Hippocampus_comes
ENSCING00000020946	-	87	40.000	ENSIPUG00000009966	mrpl16	62	40.000	Ictalurus_punctatus
ENSCING00000020946	-	85	39.744	ENSSTOG00000021462	MRPL16	62	39.744	Ictidomys_tridecemlineatus
ENSCING00000020946	-	85	39.103	ENSJJAG00000018928	Mrpl16	62	39.103	Jaculus_jaculus
ENSCING00000020946	-	85	38.462	ENSKMAG00000022035	mrpl16	62	38.462	Kryptolebias_marmoratus
ENSCING00000020946	-	85	39.744	ENSLBEG00000013193	mrpl16	61	39.744	Labrus_bergylta
ENSCING00000020946	-	98	41.899	ENSLACG00000002060	MRPL16	71	41.899	Latimeria_chalumnae
ENSCING00000020946	-	86	42.038	ENSLOCG00000010979	mrpl16	62	42.038	Lepisosteus_oculatus
ENSCING00000020946	-	85	39.744	ENSLAFG00000001490	MRPL16	62	39.744	Loxodonta_africana
ENSCING00000020946	-	85	39.103	ENSMFAG00000002379	MRPL16	62	39.103	Macaca_fascicularis
ENSCING00000020946	-	85	39.103	ENSMMUG00000022321	MRPL16	62	39.103	Macaca_mulatta
ENSCING00000020946	-	85	39.103	ENSMNEG00000040325	MRPL16	62	39.103	Macaca_nemestrina
ENSCING00000020946	-	85	40.385	ENSMLEG00000033890	MRPL16	68	40.385	Mandrillus_leucophaeus
ENSCING00000020946	-	85	41.667	ENSMAMG00000003085	mrpl16	69	41.667	Mastacembelus_armatus
ENSCING00000020946	-	85	39.103	ENSMZEG00005000716	mrpl16	60	39.103	Maylandia_zebra
ENSCING00000020946	-	87	40.625	ENSMGAG00000003328	MRPL16	63	40.625	Meleagris_gallopavo
ENSCING00000020946	-	85	40.385	ENSMAUG00000011181	Mrpl16	62	40.385	Mesocricetus_auratus
ENSCING00000020946	-	85	39.744	ENSMICG00000011027	MRPL16	62	39.744	Microcebus_murinus
ENSCING00000020946	-	85	39.103	ENSMOCG00000003604	Mrpl16	66	39.103	Microtus_ochrogaster
ENSCING00000020946	-	85	39.744	ENSMMOG00000018112	mrpl16	60	39.744	Mola_mola
ENSCING00000020946	-	97	38.983	ENSMODG00000020205	MRPL16	71	38.983	Monodelphis_domestica
ENSCING00000020946	-	85	39.103	ENSMALG00000016263	mrpl16	62	39.103	Monopterus_albus
ENSCING00000020946	-	85	39.103	MGP_CAROLIEiJ_G0022733	Mrpl16	62	39.103	Mus_caroli
ENSCING00000020946	-	85	39.744	ENSMUSG00000024683	Mrpl16	62	39.744	Mus_musculus
ENSCING00000020946	-	85	38.462	MGP_PahariEiJ_G0014227	Mrpl16	62	38.462	Mus_pahari
ENSCING00000020946	-	85	39.744	MGP_SPRETEiJ_G0023648	Mrpl16	62	39.744	Mus_spretus
ENSCING00000020946	-	85	39.103	ENSMPUG00000014583	MRPL16	62	39.103	Mustela_putorius_furo
ENSCING00000020946	-	85	33.758	ENSMLUG00000027025	-	61	33.758	Myotis_lucifugus
ENSCING00000020946	-	85	39.744	ENSMLUG00000011224	-	62	39.744	Myotis_lucifugus
ENSCING00000020946	-	85	39.103	ENSNGAG00000010636	Mrpl16	62	39.103	Nannospalax_galili
ENSCING00000020946	-	85	39.103	ENSNBRG00000017868	mrpl16	60	39.103	Neolamprologus_brichardi
ENSCING00000020946	-	85	40.385	ENSNLEG00000013137	MRPL16	62	40.385	Nomascus_leucogenys
ENSCING00000020946	-	85	41.026	ENSMEUG00000016437	MRPL16	74	41.026	Notamacropus_eugenii
ENSCING00000020946	-	85	39.103	ENSOPRG00000014638	-	62	39.103	Ochotona_princeps
ENSCING00000020946	-	85	39.744	ENSODEG00000001664	MRPL16	62	39.744	Octodon_degus
ENSCING00000020946	-	85	38.462	ENSONIG00000003122	mrpl16	60	38.462	Oreochromis_niloticus
ENSCING00000020946	-	85	39.103	ENSOCUG00000013390	MRPL16	62	39.103	Oryctolagus_cuniculus
ENSCING00000020946	-	85	39.744	ENSORLG00000026229	mrpl16	60	39.744	Oryzias_latipes
ENSCING00000020946	-	85	39.744	ENSORLG00015014562	mrpl16	57	39.744	Oryzias_latipes_hsok
ENSCING00000020946	-	85	37.179	ENSOMEG00000016848	mrpl16	60	37.179	Oryzias_melastigma
ENSCING00000020946	-	85	38.462	ENSOGAG00000001486	MRPL16	62	38.462	Otolemur_garnettii
ENSCING00000020946	-	85	41.667	ENSOARG00000012266	MRPL16	62	41.667	Ovis_aries
ENSCING00000020946	-	85	38.462	ENSPPAG00000038990	MRPL16	62	38.462	Pan_paniscus
ENSCING00000020946	-	85	39.103	ENSPPRG00000013233	MRPL16	62	39.103	Panthera_pardus
ENSCING00000020946	-	85	39.103	ENSPTIG00000014818	MRPL16	62	39.103	Panthera_tigris_altaica
ENSCING00000020946	-	85	39.103	ENSPTRG00000003700	MRPL16	62	39.103	Pan_troglodytes
ENSCING00000020946	-	85	39.103	ENSPANG00000010272	MRPL16	62	39.103	Papio_anubis
ENSCING00000020946	-	99	37.158	ENSPKIG00000010334	mrpl16	77	37.158	Paramormyrops_kingsleyae
ENSCING00000020946	-	85	41.667	ENSPSIG00000016182	MRPL16	63	41.667	Pelodiscus_sinensis
ENSCING00000020946	-	85	41.667	ENSPMGG00000001444	mrpl16	61	41.667	Periophthalmus_magnuspinnatus
ENSCING00000020946	-	85	39.103	ENSPEMG00000001887	Mrpl16	62	39.103	Peromyscus_maniculatus_bairdii
ENSCING00000020946	-	85	43.226	ENSPMAG00000001603	mrpl16	59	43.226	Petromyzon_marinus
ENSCING00000020946	-	85	41.026	ENSPCIG00000009443	MRPL16	62	41.026	Phascolarctos_cinereus
ENSCING00000020946	-	85	41.667	ENSPFOG00000009144	mrpl16	60	41.667	Poecilia_formosa
ENSCING00000020946	-	85	41.667	ENSPLAG00000010811	mrpl16	62	41.667	Poecilia_latipinna
ENSCING00000020946	-	85	41.667	ENSPMEG00000023095	mrpl16	60	41.667	Poecilia_mexicana
ENSCING00000020946	-	91	38.922	ENSPREG00000021826	mrpl16	66	41.026	Poecilia_reticulata
ENSCING00000020946	-	85	38.462	ENSPPYG00000003227	MRPL16	62	38.462	Pongo_abelii
ENSCING00000020946	-	85	39.103	ENSPCAG00000008055	MRPL16	62	39.103	Procavia_capensis
ENSCING00000020946	-	85	39.103	ENSPCOG00000025205	MRPL16	62	39.103	Propithecus_coquereli
ENSCING00000020946	-	85	38.462	ENSPVAG00000012250	MRPL16	62	38.462	Pteropus_vampyrus
ENSCING00000020946	-	85	39.744	ENSPNYG00000003647	mrpl16	60	39.744	Pundamilia_nyererei
ENSCING00000020946	-	85	41.026	ENSPNAG00000010473	mrpl16	61	41.026	Pygocentrus_nattereri
ENSCING00000020946	-	85	39.744	ENSRNOG00000021005	Mrpl16	62	39.744	Rattus_norvegicus
ENSCING00000020946	-	85	39.744	ENSRBIG00000018289	MRPL16	62	39.744	Rhinopithecus_bieti
ENSCING00000020946	-	85	39.744	ENSRROG00000040273	MRPL16	62	39.744	Rhinopithecus_roxellana
ENSCING00000020946	-	85	39.103	ENSSBOG00000005353	MRPL16	69	39.103	Saimiri_boliviensis_boliviensis
ENSCING00000020946	-	85	41.667	ENSSHAG00000006665	MRPL16	62	41.667	Sarcophilus_harrisii
ENSCING00000020946	-	99	38.798	ENSSFOG00015008725	mrpl16	78	39.130	Scleropages_formosus
ENSCING00000020946	-	85	38.710	ENSSMAG00000021324	mrpl16	64	38.710	Scophthalmus_maximus
ENSCING00000020946	-	85	39.744	ENSSDUG00000006482	mrpl16	60	39.744	Seriola_dumerili
ENSCING00000020946	-	85	39.744	ENSSLDG00000000994	mrpl16	60	39.744	Seriola_lalandi_dorsalis
ENSCING00000020946	-	85	40.385	ENSSARG00000004666	MRPL16	74	40.385	Sorex_araneus
ENSCING00000020946	-	85	42.308	ENSSPUG00000018047	MRPL16	62	42.308	Sphenodon_punctatus
ENSCING00000020946	-	85	36.538	ENSSPAG00000017237	mrpl16	60	36.538	Stegastes_partitus
ENSCING00000020946	-	85	39.103	ENSSSCG00000013118	MRPL16	62	39.103	Sus_scrofa
ENSCING00000020946	-	72	44.697	ENSTGUG00000006277	MRPL16	89	44.697	Taeniopygia_guttata
ENSCING00000020946	-	70	41.085	ENSTRUG00000017231	mrpl16	52	41.085	Takifugu_rubripes
ENSCING00000020946	-	85	40.385	ENSTNIG00000009438	mrpl16	61	40.385	Tetraodon_nigroviridis
ENSCING00000020946	-	85	39.744	ENSTBEG00000007959	MRPL16	62	39.744	Tupaia_belangeri
ENSCING00000020946	-	85	40.385	ENSTTRG00000009428	MRPL16	62	40.385	Tursiops_truncatus
ENSCING00000020946	-	85	39.103	ENSUAMG00000009824	MRPL16	71	39.103	Ursus_americanus
ENSCING00000020946	-	85	39.103	ENSUMAG00000018814	MRPL16	71	39.103	Ursus_maritimus
ENSCING00000020946	-	85	39.103	ENSVVUG00000026682	MRPL16	64	39.103	Vulpes_vulpes
ENSCING00000020946	-	88	37.888	ENSXETG00000024210	mrpl16	64	37.888	Xenopus_tropicalis
ENSCING00000020946	-	85	40.385	ENSXCOG00000002880	mrpl16	63	40.385	Xiphophorus_couchianus
ENSCING00000020946	-	85	40.385	ENSXMAG00000019187	mrpl16	60	40.385	Xiphophorus_maculatus