EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000021231 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2880 bases
Position: chrHT001082.1:3733-6612
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032038	RVT_1	PF00078.27	5.8e-17	1	1
ENSCINP00000034589	RVT_1	PF00078.27	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031042	-	2172	-	ENSCINP00000034589	723 (aa)	-	H2XY55
ENSCINT00000035281	-	2436	-	ENSCINP00000032038	812 (aa)	-	H2XQV4

Gene Model

Click here to download ENSCING00000021231's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000021231's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000021231	-	91	31.352	ENSAPOG00000022647	-	52	31.352	Acanthochromis_polyacanthus
ENSCING00000021231	-	52	32.755	ENSAPEG00000006765	-	70	32.755	Amphiprion_percula
ENSCING00000021231	-	81	30.769	ENSAPEG00000015494	-	54	31.185	Amphiprion_percula
ENSCING00000021231	-	86	36.364	ENSATEG00000018698	-	68	32.805	Anabas_testudineus
ENSCING00000021231	-	71	30.816	ENSATEG00000006997	-	60	30.816	Anabas_testudineus
ENSCING00000021231	-	72	31.127	ENSATEG00000016298	-	60	31.127	Anabas_testudineus
ENSCING00000021231	-	74	30.351	ENSACLG00000017258	-	58	30.351	Astatotilapia_calliptera
ENSCING00000021231	-	72	33.652	ENSACLG00000008010	-	54	33.652	Astatotilapia_calliptera
ENSCING00000021231	-	74	33.511	ENSACLG00000000373	-	58	33.511	Astatotilapia_calliptera
ENSCING00000021231	-	82	33.550	ENSACLG00000003852	-	50	33.550	Astatotilapia_calliptera
ENSCING00000021231	-	69	34.686	ENSACLG00000024556	-	71	34.686	Astatotilapia_calliptera
ENSCING00000021231	-	74	33.333	ENSACLG00000012657	-	51	33.511	Astatotilapia_calliptera
ENSCING00000021231	-	95	39.529	ENSACLG00000019989	-	88	39.529	Astatotilapia_calliptera
ENSCING00000021231	-	78	33.551	ENSACLG00000010542	-	51	33.551	Astatotilapia_calliptera
ENSCING00000021231	-	51	31.982	ENSACLG00000012278	-	57	31.982	Astatotilapia_calliptera
ENSCING00000021231	-	84	32.604	ENSACLG00000005531	-	52	32.604	Astatotilapia_calliptera
ENSCING00000021231	-	52	34.773	ENSACLG00000014740	-	51	34.773	Astatotilapia_calliptera
ENSCING00000021231	-	87	30.867	ENSACLG00000014688	-	66	30.867	Astatotilapia_calliptera
ENSCING00000021231	-	78	31.818	ENSACLG00000024387	-	57	31.818	Astatotilapia_calliptera
ENSCING00000021231	-	51	32.522	ENSACLG00000005847	-	61	32.522	Astatotilapia_calliptera
ENSCING00000021231	-	71	33.043	ENSACLG00000018344	-	50	33.478	Astatotilapia_calliptera
ENSCING00000021231	-	86	31.276	ENSACLG00000001282	-	51	31.276	Astatotilapia_calliptera
ENSCING00000021231	-	77	35.426	ENSACLG00000013947	-	61	35.202	Astatotilapia_calliptera
ENSCING00000021231	-	70	33.022	ENSACLG00000021355	-	67	33.022	Astatotilapia_calliptera
ENSCING00000021231	-	94	30.716	ENSACLG00000006945	-	61	30.716	Astatotilapia_calliptera
ENSCING00000021231	-	89	34.475	ENSACLG00000027627	-	63	34.475	Astatotilapia_calliptera
ENSCING00000021231	-	94	30.716	ENSACLG00000003799	-	61	30.716	Astatotilapia_calliptera
ENSCING00000021231	-	72	32.898	ENSAMXG00000032559	-	53	32.898	Astyanax_mexicanus
ENSCING00000021231	-	52	33.030	ENSAMXG00000040471	-	66	33.030	Astyanax_mexicanus
ENSCING00000021231	-	84	32.530	ENSAMXG00000032783	-	53	32.530	Astyanax_mexicanus
ENSCING00000021231	-	81	30.233	ENSAMXG00000030908	-	59	30.233	Astyanax_mexicanus
ENSCING00000021231	-	84	33.257	ENSAMXG00000040885	-	54	33.257	Astyanax_mexicanus
ENSCING00000021231	-	71	34.240	ENSAMXG00000039473	-	54	34.240	Astyanax_mexicanus
ENSCING00000021231	-	64	31.288	ENSAMXG00000043821	-	69	30.447	Astyanax_mexicanus
ENSCING00000021231	-	81	32.543	ENSAMXG00000041369	-	59	32.543	Astyanax_mexicanus
ENSCING00000021231	-	64	34.118	ENSAMXG00000038033	-	51	34.340	Astyanax_mexicanus
ENSCING00000021231	-	51	32.743	ENSAMXG00000043631	-	55	32.743	Astyanax_mexicanus
ENSCING00000021231	-	61	33.007	ENSAMXG00000041896	-	66	33.007	Astyanax_mexicanus
ENSCING00000021231	-	87	30.040	ENSAMXG00000029230	-	50	30.040	Astyanax_mexicanus
ENSCING00000021231	-	51	32.743	ENSAMXG00000030761	-	60	32.743	Astyanax_mexicanus
ENSCING00000021231	-	89	30.873	ENSAMXG00000038338	-	60	30.873	Astyanax_mexicanus
ENSCING00000021231	-	85	30.341	ENSAMXG00000030479	-	57	30.341	Astyanax_mexicanus
ENSCING00000021231	-	79	35.054	ENSAMXG00000034382	-	58	35.054	Astyanax_mexicanus
ENSCING00000021231	-	68	33.231	ENSAMXG00000033197	-	81	33.231	Astyanax_mexicanus
ENSCING00000021231	-	54	30.405	ENSAMXG00000043469	-	100	30.277	Astyanax_mexicanus
ENSCING00000021231	-	80	34.451	ENSAMXG00000035923	-	78	34.451	Astyanax_mexicanus
ENSCING00000021231	-	67	30.986	ENSAMXG00000039114	-	55	30.986	Astyanax_mexicanus
ENSCING00000021231	-	74	34.505	ENSAMXG00000036113	-	57	33.846	Astyanax_mexicanus
ENSCING00000021231	-	52	30.870	ENSAMXG00000042777	-	60	30.870	Astyanax_mexicanus
ENSCING00000021231	-	84	32.604	ENSAMXG00000030022	-	58	32.604	Astyanax_mexicanus
ENSCING00000021231	-	82	35.862	ENSAMXG00000043385	-	53	35.862	Astyanax_mexicanus
ENSCING00000021231	-	51	32.102	ENSCPBG00000001369	-	76	32.102	Chrysemys_picta_bellii
ENSCING00000021231	-	99	81.168	ENSCING00000023194	-	93	81.168	Ciona_intestinalis
ENSCING00000021231	-	100	87.024	ENSCING00000018938	-	79	87.024	Ciona_intestinalis
ENSCING00000021231	-	63	30.172	ENSCSEG00000010442	-	56	30.172	Cynoglossus_semilaevis
ENSCING00000021231	-	79	30.983	ENSCVAG00000019395	-	52	30.983	Cyprinodon_variegatus
ENSCING00000021231	-	66	36.800	ENSCVAG00000020907	-	76	34.270	Cyprinodon_variegatus
ENSCING00000021231	-	80	33.042	ENSGAFG00000016352	-	54	33.042	Gambusia_affinis
ENSCING00000021231	-	61	31.712	ENSGAGG00000007173	-	86	31.712	Gopherus_agassizii
ENSCING00000021231	-	63	31.754	ENSGAGG00000022002	-	67	31.754	Gopherus_agassizii
ENSCING00000021231	-	51	33.180	ENSGAGG00000013650	-	76	33.180	Gopherus_agassizii
ENSCING00000021231	-	51	33.871	ENSGAGG00000002613	-	70	33.871	Gopherus_agassizii
ENSCING00000021231	-	71	38.910	ENSHBUG00000016445	-	96	39.212	Haplochromis_burtoni
ENSCING00000021231	-	78	34.130	ENSHCOG00000012267	-	56	34.130	Hippocampus_comes
ENSCING00000021231	-	62	30.179	ENSKMAG00000013568	-	70	30.179	Kryptolebias_marmoratus
ENSCING00000021231	-	62	33.000	ENSLACG00000010043	-	55	33.000	Latimeria_chalumnae
ENSCING00000021231	-	54	31.188	ENSLACG00000015558	-	58	31.188	Latimeria_chalumnae
ENSCING00000021231	-	69	31.933	ENSLACG00000002665	-	61	31.102	Latimeria_chalumnae
ENSCING00000021231	-	62	31.329	ENSLACG00000007522	-	75	31.329	Latimeria_chalumnae
ENSCING00000021231	-	59	30.523	ENSLACG00000009347	-	78	30.523	Latimeria_chalumnae
ENSCING00000021231	-	61	30.400	ENSLACG00000005007	-	68	30.400	Latimeria_chalumnae
ENSCING00000021231	-	55	31.884	ENSMAMG00000016004	-	72	31.884	Mastacembelus_armatus
ENSCING00000021231	-	58	31.187	ENSMAMG00000019918	-	79	31.187	Mastacembelus_armatus
ENSCING00000021231	-	72	33.000	ENSMAMG00000021634	-	89	33.000	Mastacembelus_armatus
ENSCING00000021231	-	88	32.207	ENSMZEG00005012274	-	55	32.207	Maylandia_zebra
ENSCING00000021231	-	81	30.064	ENSMZEG00005025542	-	54	30.064	Maylandia_zebra
ENSCING00000021231	-	52	32.972	ENSMZEG00005017878	-	70	32.972	Maylandia_zebra
ENSCING00000021231	-	52	31.066	ENSMZEG00005008378	-	59	31.066	Maylandia_zebra
ENSCING00000021231	-	78	32.892	ENSMALG00000020759	-	50	32.892	Monopterus_albus
ENSCING00000021231	-	79	35.955	ENSORLG00000028051	-	50	35.955	Oryzias_latipes
ENSCING00000021231	-	69	33.136	ENSORLG00000029184	-	74	33.136	Oryzias_latipes
ENSCING00000021231	-	85	33.398	ENSORLG00000023024	-	54	33.398	Oryzias_latipes
ENSCING00000021231	-	94	30.094	ENSORLG00000027277	-	62	30.094	Oryzias_latipes
ENSCING00000021231	-	86	30.105	ENSORLG00000022583	-	57	30.105	Oryzias_latipes
ENSCING00000021231	-	79	32.892	ENSORLG00000027117	-	50	32.892	Oryzias_latipes
ENSCING00000021231	-	80	34.604	ENSORLG00000025268	-	77	34.426	Oryzias_latipes
ENSCING00000021231	-	75	32.985	ENSORLG00000024878	-	65	32.985	Oryzias_latipes
ENSCING00000021231	-	79	31.659	ENSORLG00000027307	-	56	31.659	Oryzias_latipes
ENSCING00000021231	-	88	31.881	ENSORLG00020016001	-	58	31.724	Oryzias_latipes_hni
ENSCING00000021231	-	89	32.385	ENSORLG00020022538	-	54	32.385	Oryzias_latipes_hni
ENSCING00000021231	-	71	33.590	ENSORLG00020016695	-	79	33.590	Oryzias_latipes_hni
ENSCING00000021231	-	85	33.398	ENSORLG00020007775	-	54	33.398	Oryzias_latipes_hni
ENSCING00000021231	-	81	31.369	ENSORLG00020009176	-	51	31.369	Oryzias_latipes_hni
ENSCING00000021231	-	66	37.011	ENSORLG00020018561	-	54	36.299	Oryzias_latipes_hni
ENSCING00000021231	-	78	33.913	ENSORLG00020017608	-	62	33.913	Oryzias_latipes_hni
ENSCING00000021231	-	81	31.542	ENSORLG00015000431	-	51	31.542	Oryzias_latipes_hsok
ENSCING00000021231	-	81	31.659	ENSORLG00015018293	-	57	31.659	Oryzias_latipes_hsok
ENSCING00000021231	-	86	30.513	ENSORLG00015022011	-	71	30.513	Oryzias_latipes_hsok
ENSCING00000021231	-	50	34.642	ENSORLG00015008138	-	80	34.642	Oryzias_latipes_hsok
ENSCING00000021231	-	79	32.166	ENSORLG00015000379	-	88	32.471	Oryzias_latipes_hsok
ENSCING00000021231	-	80	33.409	ENSORLG00015000130	-	59	33.409	Oryzias_latipes_hsok
ENSCING00000021231	-	75	32.903	ENSORLG00015012565	-	52	32.903	Oryzias_latipes_hsok
ENSCING00000021231	-	80	30.675	ENSORLG00015017494	-	51	30.368	Oryzias_latipes_hsok
ENSCING00000021231	-	76	35.484	ENSORLG00015001207	-	53	35.484	Oryzias_latipes_hsok
ENSCING00000021231	-	91	32.919	ENSOMEG00000007894	-	51	32.919	Oryzias_melastigma
ENSCING00000021231	-	81	31.362	ENSOMEG00000012350	-	50	31.362	Oryzias_melastigma
ENSCING00000021231	-	88	33.261	ENSOMEG00000001995	-	64	33.261	Oryzias_melastigma
ENSCING00000021231	-	76	32.784	ENSOMEG00000000573	-	57	32.784	Oryzias_melastigma
ENSCING00000021231	-	84	32.826	ENSPKIG00000021764	-	50	32.826	Paramormyrops_kingsleyae
ENSCING00000021231	-	82	30.886	ENSPKIG00000012188	-	51	30.886	Paramormyrops_kingsleyae
ENSCING00000021231	-	78	31.556	ENSPKIG00000013293	-	58	31.556	Paramormyrops_kingsleyae
ENSCING00000021231	-	50	33.800	ENSPKIG00000005406	-	70	33.800	Paramormyrops_kingsleyae
ENSCING00000021231	-	84	33.556	ENSPKIG00000020388	-	55	33.630	Paramormyrops_kingsleyae
ENSCING00000021231	-	73	32.512	ENSPKIG00000007924	-	64	32.512	Paramormyrops_kingsleyae
ENSCING00000021231	-	85	31.071	ENSPKIG00000020363	-	63	30.714	Paramormyrops_kingsleyae
ENSCING00000021231	-	63	34.766	ENSPKIG00000006120	-	56	34.241	Paramormyrops_kingsleyae
ENSCING00000021231	-	91	31.919	ENSPKIG00000000869	-	54	31.919	Paramormyrops_kingsleyae
ENSCING00000021231	-	52	32.579	ENSPSIG00000001150	-	59	32.579	Pelodiscus_sinensis
ENSCING00000021231	-	51	34.018	ENSPSIG00000000226	-	83	34.169	Pelodiscus_sinensis
ENSCING00000021231	-	53	30.282	ENSPMEG00000019465	-	94	30.282	Poecilia_mexicana
ENSCING00000021231	-	76	30.603	ENSPMEG00000008618	-	55	30.388	Poecilia_mexicana
ENSCING00000021231	-	84	33.615	ENSPMEG00000023031	-	64	33.615	Poecilia_mexicana
ENSCING00000021231	-	66	33.333	ENSPREG00000006122	-	65	33.333	Poecilia_reticulata
ENSCING00000021231	-	79	33.853	ENSPREG00000006052	-	60	33.853	Poecilia_reticulata
ENSCING00000021231	-	81	32.061	ENSPREG00000005134	-	54	32.061	Poecilia_reticulata
ENSCING00000021231	-	80	32.784	ENSPNAG00000017165	-	51	32.784	Pygocentrus_nattereri
ENSCING00000021231	-	61	30.459	ENSSFOG00015024061	-	87	30.459	Scleropages_formosus
ENSCING00000021231	-	75	30.693	ENSSDUG00000010222	-	57	30.033	Seriola_dumerili
ENSCING00000021231	-	84	32.832	ENSSDUG00000010009	-	71	32.832	Seriola_dumerili
ENSCING00000021231	-	80	32.773	ENSSLDG00000003503	-	65	32.773	Seriola_lalandi_dorsalis
ENSCING00000021231	-	82	38.126	ENSTRUG00000021236	-	94	38.387	Takifugu_rubripes
ENSCING00000021231	-	94	38.897	ENSTNIG00000006817	-	86	38.734	Tetraodon_nigroviridis
ENSCING00000021231	-	93	30.116	ENSXMAG00000024126	-	63	30.116	Xiphophorus_maculatus
ENSCING00000021231	-	80	33.260	ENSXMAG00000023370	-	62	33.260	Xiphophorus_maculatus
ENSCING00000021231	-	76	30.645	ENSXMAG00000024180	-	68	30.645	Xiphophorus_maculatus
ENSCING00000021231	-	86	32.479	ENSXMAG00000022159	-	60	32.479	Xiphophorus_maculatus
ENSCING00000021231	-	56	30.435	ENSXMAG00000023507	-	97	30.435	Xiphophorus_maculatus
ENSCING00000021231	-	86	34.312	ENSXMAG00000028850	-	54	34.312	Xiphophorus_maculatus
ENSCING00000021231	-	80	32.895	ENSXMAG00000021440	-	54	32.895	Xiphophorus_maculatus
ENSCING00000021231	-	75	31.224	ENSXMAG00000025551	-	58	31.224	Xiphophorus_maculatus
ENSCING00000021231	-	86	34.312	ENSXMAG00000021696	-	54	34.312	Xiphophorus_maculatus
ENSCING00000021231	-	86	34.312	ENSXMAG00000023206	-	54	34.312	Xiphophorus_maculatus
ENSCING00000021231	-	75	33.260	ENSXMAG00000029360	-	64	33.260	Xiphophorus_maculatus
ENSCING00000021231	-	88	33.410	ENSXMAG00000021174	-	60	33.410	Xiphophorus_maculatus