EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000021232 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 13053 bases
Position: chr11:2877168-2890220
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000034039	Symplekin_C	PF12295.8	5e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000032315	-	3815	-	ENSCINP00000034039	1089 (aa)	-	H2XWK5

Gene Model

Click here to download ENSCING00000021232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000021232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000021232	-	96	49.153	ENSG00000125755	SYMPK	80	68.421	Homo_sapiens
ENSCING00000021232	-	96	48.636	ENSAPOG00000015934	sympk	96	47.065	Acanthochromis_polyacanthus
ENSCING00000021232	-	96	49.200	ENSAMEG00000000680	SYMPK	83	49.200	Ailuropoda_melanoleuca
ENSCING00000021232	-	97	48.048	ENSACIG00000006357	sympk	90	47.955	Amphilophus_citrinellus
ENSCING00000021232	-	96	48.590	ENSAOCG00000024124	sympk	89	48.585	Amphiprion_ocellaris
ENSCING00000021232	-	96	48.590	ENSAPEG00000003465	sympk	87	48.196	Amphiprion_percula
ENSCING00000021232	-	98	47.539	ENSATEG00000008472	sympk	88	47.451	Anabas_testudineus
ENSCING00000021232	-	91	48.060	ENSACAG00000004126	SYMPK	83	48.252	Anolis_carolinensis
ENSCING00000021232	-	96	48.964	ENSANAG00000021087	SYMPK	94	49.213	Aotus_nancymaae
ENSCING00000021232	-	96	48.918	ENSACLG00000001813	sympk	86	48.918	Astatotilapia_calliptera
ENSCING00000021232	-	97	47.903	ENSAMXG00000013677	sympk	87	48.183	Astyanax_mexicanus
ENSCING00000021232	-	96	49.341	ENSBTAG00000012101	SYMPK	83	49.341	Bos_taurus
ENSCING00000021232	-	96	48.870	ENSCJAG00000012172	SYMPK	93	48.534	Callithrix_jacchus
ENSCING00000021232	-	96	49.439	ENSCAFG00000004376	SYMPK	82	49.200	Canis_familiaris
ENSCING00000021232	-	96	49.439	ENSCAFG00020001815	SYMPK	82	49.200	Canis_lupus_dingo
ENSCING00000021232	-	96	49.435	ENSCHIG00000026784	SYMPK	83	49.435	Capra_hircus
ENSCING00000021232	-	96	49.389	ENSTSYG00000006268	SYMPK	95	47.067	Carlito_syrichta
ENSCING00000021232	-	92	48.192	ENSCAPG00000005112	SYMPK	91	48.192	Cavia_aperea
ENSCING00000021232	-	96	49.200	ENSCPOG00000010434	SYMPK	84	49.200	Cavia_porcellus
ENSCING00000021232	-	96	48.964	ENSCCAG00000036309	SYMPK	94	49.075	Cebus_capucinus
ENSCING00000021232	-	96	49.058	ENSCATG00000045107	SYMPK	94	49.121	Cercocebus_atys
ENSCING00000021232	-	98	48.756	ENSCLAG00000001206	SYMPK	84	48.756	Chinchilla_lanigera
ENSCING00000021232	-	96	49.058	ENSCSAG00000003115	SYMPK	82	49.058	Chlorocebus_sabaeus
ENSCING00000021232	-	74	81.250	ENSCHOG00000012456	SYMPK	75	81.250	Choloepus_hoffmanni
ENSCING00000021232	-	96	48.596	ENSCPBG00000007170	SYMPK	85	48.876	Chrysemys_picta_bellii
ENSCING00000021232	-	94	79.640	ENSCSAVG00000005154	-	99	79.735	Ciona_savignyi
ENSCING00000021232	-	96	48.539	ENSCANG00000040907	SYMPK	93	48.720	Colobus_angolensis_palliatus
ENSCING00000021232	-	90	50.327	ENSCGRG00001010086	Sympk	78	50.327	Cricetulus_griseus_chok1gshd
ENSCING00000021232	-	98	48.203	ENSCSEG00000016802	sympk	87	47.970	Cynoglossus_semilaevis
ENSCING00000021232	-	97	47.575	ENSDARG00000059553	sympk	85	47.388	Danio_rerio
ENSCING00000021232	-	96	48.776	ENSDNOG00000016149	SYMPK	82	48.776	Dasypus_novemcinctus
ENSCING00000021232	-	94	35.876	FBgn0037371	Sym	89	35.876	Drosophila_melanogaster
ENSCING00000021232	-	78	45.056	ENSEBUG00000000387	sympk	90	44.831	Eptatretus_burgeri
ENSCING00000021232	-	96	49.389	ENSEASG00005014227	SYMPK	83	49.347	Equus_asinus_asinus
ENSCING00000021232	-	96	49.389	ENSECAG00000008163	SYMPK	83	49.347	Equus_caballus
ENSCING00000021232	-	72	50.970	ENSEEUG00000000270	-	73	50.970	Erinaceus_europaeus
ENSCING00000021232	-	97	48.141	ENSELUG00000000850	sympk	84	48.089	Esox_lucius
ENSCING00000021232	-	96	49.200	ENSFCAG00000007337	SYMPK	82	49.160	Felis_catus
ENSCING00000021232	-	98	48.616	ENSFDAG00000011272	SYMPK	84	48.616	Fukomys_damarensis
ENSCING00000021232	-	96	48.822	ENSFHEG00000010274	sympk	86	48.679	Fundulus_heteroclitus
ENSCING00000021232	-	96	47.966	ENSGMOG00000002357	sympk	97	47.682	Gadus_morhua
ENSCING00000021232	-	97	47.858	ENSGAFG00000010976	sympk	88	47.858	Gambusia_affinis
ENSCING00000021232	-	98	48.018	ENSGACG00000002735	sympk	96	47.926	Gasterosteus_aculeatus
ENSCING00000021232	-	64	46.983	ENSGAGG00000012538	-	87	47.489	Gopherus_agassizii
ENSCING00000021232	-	96	49.247	ENSGGOG00000003410	SYMPK	91	49.409	Gorilla_gorilla
ENSCING00000021232	-	96	48.872	ENSHBUG00000023564	sympk	86	48.872	Haplochromis_burtoni
ENSCING00000021232	-	96	46.798	ENSHGLG00000005228	SYMPK	83	46.310	Heterocephalus_glaber_female
ENSCING00000021232	-	96	48.964	ENSHGLG00100018571	SYMPK	84	48.964	Heterocephalus_glaber_male
ENSCING00000021232	-	97	45.122	ENSHCOG00000017400	sympk	94	43.855	Hippocampus_comes
ENSCING00000021232	-	96	48.920	ENSIPUG00000024020	SYMPK	88	47.806	Ictalurus_punctatus
ENSCING00000021232	-	98	48.616	ENSSTOG00000001534	SYMPK	84	48.616	Ictidomys_tridecemlineatus
ENSCING00000021232	-	98	48.247	ENSJJAG00000006633	Sympk	84	48.247	Jaculus_jaculus
ENSCING00000021232	-	96	48.256	ENSKMAG00000016292	sympk	86	48.820	Kryptolebias_marmoratus
ENSCING00000021232	-	96	48.968	ENSLBEG00000027913	sympk	92	44.876	Labrus_bergylta
ENSCING00000021232	-	96	47.826	ENSLACG00000016497	SYMPK	92	46.222	Latimeria_chalumnae
ENSCING00000021232	-	96	49.111	ENSLAFG00000008726	SYMPK	82	48.833	Loxodonta_africana
ENSCING00000021232	-	96	49.058	ENSMMUG00000015428	SYMPK	93	46.395	Macaca_mulatta
ENSCING00000021232	-	96	49.058	ENSMNEG00000019439	SYMPK	94	49.121	Macaca_nemestrina
ENSCING00000021232	-	96	49.058	ENSMLEG00000040508	SYMPK	94	49.121	Mandrillus_leucophaeus
ENSCING00000021232	-	96	49.055	ENSMAMG00000010486	sympk	86	49.007	Mastacembelus_armatus
ENSCING00000021232	-	96	48.918	ENSMZEG00005014146	sympk	86	48.918	Maylandia_zebra
ENSCING00000021232	-	94	49.187	ENSMAUG00000015657	Sympk	81	49.187	Mesocricetus_auratus
ENSCING00000021232	-	96	49.294	ENSMICG00000001871	SYMPK	87	47.346	Microcebus_murinus
ENSCING00000021232	-	98	48.571	ENSMOCG00000008388	Sympk	83	48.571	Microtus_ochrogaster
ENSCING00000021232	-	96	46.981	ENSMMOG00000019227	sympk	89	46.843	Mola_mola
ENSCING00000021232	-	96	49.247	ENSMODG00000021534	SYMPK	84	48.708	Monodelphis_domestica
ENSCING00000021232	-	80	45.190	ENSMALG00000008347	sympk	90	45.281	Monopterus_albus
ENSCING00000021232	-	96	48.918	MGP_CAROLIEiJ_G0029267	Sympk	77	64.220	Mus_caroli
ENSCING00000021232	-	96	48.682	ENSMUSG00000023118	Sympk	76	64.220	Mus_musculus
ENSCING00000021232	-	96	48.918	MGP_PahariEiJ_G0021127	Sympk	77	64.220	Mus_pahari
ENSCING00000021232	-	96	48.776	MGP_SPRETEiJ_G0030351	-	77	64.220	Mus_spretus
ENSCING00000021232	-	96	49.433	ENSMPUG00000005505	SYMPK	82	49.151	Mustela_putorius_furo
ENSCING00000021232	-	80	46.727	ENSMLUG00000001359	SYMPK	87	46.727	Myotis_lucifugus
ENSCING00000021232	-	96	49.106	ENSNGAG00000000820	Sympk	82	49.106	Nannospalax_galili
ENSCING00000021232	-	96	48.776	ENSNBRG00000018101	sympk	90	48.776	Neolamprologus_brichardi
ENSCING00000021232	-	96	42.061	ENSNLEG00000002369	SYMPK	83	41.674	Nomascus_leucogenys
ENSCING00000021232	-	76	59.846	ENSMEUG00000003866	SYMPK	66	59.846	Notamacropus_eugenii
ENSCING00000021232	-	98	48.111	ENSOPRG00000009967	SYMPK	84	48.111	Ochotona_princeps
ENSCING00000021232	-	96	49.294	ENSODEG00000007519	SYMPK	83	49.294	Octodon_degus
ENSCING00000021232	-	96	48.555	ENSONIG00000016802	sympk	92	48.555	Oreochromis_niloticus
ENSCING00000021232	-	83	47.300	ENSOCUG00000005511	SYMPK	85	47.300	Oryctolagus_cuniculus
ENSCING00000021232	-	99	47.810	ENSORLG00000015338	sympk	93	47.562	Oryzias_latipes
ENSCING00000021232	-	99	47.949	ENSORLG00020004402	sympk	91	47.653	Oryzias_latipes_hni
ENSCING00000021232	-	99	47.949	ENSORLG00015005712	sympk	91	47.653	Oryzias_latipes_hsok
ENSCING00000021232	-	99	47.701	ENSOMEG00000022561	sympk	91	47.387	Oryzias_melastigma
ENSCING00000021232	-	96	49.247	ENSOGAG00000013483	SYMPK	82	49.247	Otolemur_garnettii
ENSCING00000021232	-	96	47.196	ENSOARG00000010349	SYMPK	82	47.524	Ovis_aries
ENSCING00000021232	-	96	49.153	ENSPPAG00000043204	SYMPK	94	46.531	Pan_paniscus
ENSCING00000021232	-	96	49.200	ENSPPRG00000004282	SYMPK	82	49.200	Panthera_pardus
ENSCING00000021232	-	96	49.200	ENSPTIG00000015420	SYMPK	88	49.200	Panthera_tigris_altaica
ENSCING00000021232	-	96	49.153	ENSPTRG00000011169	SYMPK	94	46.531	Pan_troglodytes
ENSCING00000021232	-	96	49.058	ENSPANG00000019930	SYMPK	94	49.121	Papio_anubis
ENSCING00000021232	-	96	48.465	ENSPKIG00000017132	sympk	90	44.916	Paramormyrops_kingsleyae
ENSCING00000021232	-	96	48.918	ENSPEMG00000007564	Sympk	82	48.918	Peromyscus_maniculatus_bairdii
ENSCING00000021232	-	94	47.383	ENSPMAG00000004936	sympk	100	48.145	Petromyzon_marinus
ENSCING00000021232	-	98	48.711	ENSPCIG00000024476	SYMPK	88	47.849	Phascolarctos_cinereus
ENSCING00000021232	-	97	47.774	ENSPFOG00000001194	sympk	88	47.774	Poecilia_formosa
ENSCING00000021232	-	97	47.774	ENSPLAG00000012995	sympk	88	47.774	Poecilia_latipinna
ENSCING00000021232	-	97	47.681	ENSPMEG00000008099	sympk	88	47.681	Poecilia_mexicana
ENSCING00000021232	-	97	47.403	ENSPREG00000006176	sympk	90	47.121	Poecilia_reticulata
ENSCING00000021232	-	96	48.870	ENSPPYG00000010135	SYMPK	94	48.870	Pongo_abelii
ENSCING00000021232	-	88	50.000	ENSPCAG00000005182	SYMPK	76	50.000	Procavia_capensis
ENSCING00000021232	-	96	49.294	ENSPCOG00000023740	SYMPK	97	46.739	Propithecus_coquereli
ENSCING00000021232	-	96	48.214	ENSPVAG00000001355	SYMPK	85	48.228	Pteropus_vampyrus
ENSCING00000021232	-	96	48.966	ENSPNYG00000011455	sympk	85	48.966	Pundamilia_nyererei
ENSCING00000021232	-	96	48.260	ENSPNAG00000016505	sympk	84	48.113	Pygocentrus_nattereri
ENSCING00000021232	-	98	48.155	ENSRNOG00000014353	Sympk	83	48.155	Rattus_norvegicus
ENSCING00000021232	-	96	49.058	ENSRBIG00000040963	SYMPK	94	49.163	Rhinopithecus_bieti
ENSCING00000021232	-	96	49.058	ENSRROG00000024834	SYMPK	92	48.137	Rhinopithecus_roxellana
ENSCING00000021232	-	96	48.870	ENSSBOG00000034497	SYMPK	95	46.259	Saimiri_boliviensis_boliviensis
ENSCING00000021232	-	98	48.713	ENSSHAG00000003139	SYMPK	93	49.079	Sarcophilus_harrisii
ENSCING00000021232	-	97	47.786	ENSSFOG00015006974	sympk	86	47.786	Scleropages_formosus
ENSCING00000021232	-	97	48.742	ENSSMAG00000018130	sympk	70	48.694	Scophthalmus_maximus
ENSCING00000021232	-	97	48.742	ENSSDUG00000007092	sympk	87	48.694	Seriola_dumerili
ENSCING00000021232	-	97	48.742	ENSSLDG00000014774	sympk	94	45.455	Seriola_lalandi_dorsalis
ENSCING00000021232	-	98	48.569	ENSSPUG00000002789	SYMPK	82	48.440	Sphenodon_punctatus
ENSCING00000021232	-	96	48.776	ENSSPAG00000000854	sympk	87	48.155	Stegastes_partitus
ENSCING00000021232	-	96	49.200	ENSSSCG00000003093	SYMPK	83	49.160	Sus_scrofa
ENSCING00000021232	-	96	47.753	ENSTRUG00000010202	sympk	86	47.704	Takifugu_rubripes
ENSCING00000021232	-	96	47.686	ENSTNIG00000017855	sympk	94	47.251	Tetraodon_nigroviridis
ENSCING00000021232	-	80	65.584	ENSTBEG00000000454	SYMPK	69	65.584	Tupaia_belangeri
ENSCING00000021232	-	90	54.545	ENSTTRG00000014311	SYMPK	77	54.545	Tursiops_truncatus
ENSCING00000021232	-	98	47.325	ENSUAMG00000022272	SYMPK	92	47.325	Ursus_americanus
ENSCING00000021232	-	96	49.200	ENSUMAG00000023698	SYMPK	83	49.200	Ursus_maritimus
ENSCING00000021232	-	96	49.200	ENSVVUG00000003024	SYMPK	91	49.154	Vulpes_vulpes
ENSCING00000021232	-	99	47.250	ENSXETG00000024453	sympk	91	47.250	Xenopus_tropicalis
ENSCING00000021232	-	96	48.057	ENSXCOG00000015368	sympk	98	47.970	Xiphophorus_couchianus
ENSCING00000021232	-	97	47.952	ENSXMAG00000005737	sympk	88	47.952	Xiphophorus_maculatus