EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000021247 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2784 bases
Position: chr5:3434177-3436960
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000030269	IBN_N	PF03810.19	2.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000036074	-	483	-	ENSCINP00000030269	144 (aa)	-	H2XKT7

Gene Model

Click here to download ENSCING00000021247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000021247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000021247	-	99	78.169	ENSG00000083312	TNPO1	84	73.684	Homo_sapiens
ENSCING00000021247	-	99	78.169	ENSCAFG00020017397	TNPO1	79	78.505	Canis_lupus_dingo
ENSCING00000021247	-	75	72.222	ENSCCAG00000020805	-	69	72.222	Cebus_capucinus
ENSCING00000021247	-	84	71.074	ENSHGLG00000001198	-	100	71.074	Heterocephalus_glaber_female
ENSCING00000021247	-	99	78.873	ENSSTOG00000021784	-	80	78.873	Ictidomys_tridecemlineatus
ENSCING00000021247	-	99	78.169	ENSMMUG00000020923	TNPO1	84	73.684	Macaca_mulatta
ENSCING00000021247	-	99	78.169	ENSMAUG00000020550	Tnpo1	80	78.169	Mesocricetus_auratus
ENSCING00000021247	-	99	78.169	MGP_CAROLIEiJ_G0018826	Tnpo1	80	78.169	Mus_caroli
ENSCING00000021247	-	99	78.169	ENSMUSG00000009470	Tnpo1	80	78.169	Mus_musculus
ENSCING00000021247	-	99	78.169	MGP_PahariEiJ_G0015901	Tnpo1	80	78.169	Mus_pahari
ENSCING00000021247	-	99	78.169	MGP_SPRETEiJ_G0019708	Tnpo1	80	78.169	Mus_spretus
ENSCING00000021247	-	83	69.748	ENSODEG00000009802	-	90	69.748	Octodon_degus
ENSCING00000021247	-	76	77.982	ENSUAMG00000023666	-	80	77.982	Ursus_americanus