EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000021276 (Gene tree)
Gene ID: 100180841
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 1416 bases
Position: chr9:310863-312278
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032622	RRM_1	PF00076.22	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000033051	-	1416	-	ENSCINP00000032622	472 (aa)	-	H2XSI8

Gene Model

Click here to download ENSCING00000021276's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000021276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000021276	-	100	37.598	ENSG00000185946	RNPC3	95	37.992	Homo_sapiens
ENSCING00000021276	-	90	36.623	ENSAPLG00000015605	RNPC3	98	36.184	Anas_platyrhynchos
ENSCING00000021276	-	98	39.873	ENSACAG00000002029	RNPC3	93	38.877	Anolis_carolinensis
ENSCING00000021276	-	99	38.525	ENSACLG00000014702	rnpc3	95	38.525	Astatotilapia_calliptera
ENSCING00000021276	-	98	37.702	ENSBTAG00000019091	RNPC3	95	37.160	Bos_taurus
ENSCING00000021276	-	100	36.527	ENSCHIG00000020361	RNPC3	95	36.527	Capra_hircus
ENSCING00000021276	-	100	37.149	ENSTSYG00000030256	RNPC3	95	36.800	Carlito_syrichta
ENSCING00000021276	-	88	36.054	ENSCAPG00000013600	RNPC3	99	36.054	Cavia_aperea
ENSCING00000021276	-	100	37.008	ENSCATG00000002086	RNPC3	95	37.402	Cercocebus_atys
ENSCING00000021276	-	74	34.530	ENSCATG00000035930	-	75	35.150	Cercocebus_atys
ENSCING00000021276	-	100	37.008	ENSCSAG00000001519	RNPC3	95	37.402	Chlorocebus_sabaeus
ENSCING00000021276	-	98	54.624	ENSCSAVG00000002800	-	100	54.624	Ciona_savignyi
ENSCING00000021276	-	100	36.653	ENSCGRG00001019276	Rnpc3	95	36.542	Cricetulus_griseus_chok1gshd
ENSCING00000021276	-	90	35.011	ENSCGRG00000000053	Rnpc3	98	34.914	Cricetulus_griseus_crigri
ENSCING00000021276	-	98	39.192	ENSDNOG00000047498	-	93	39.192	Dasypus_novemcinctus
ENSCING00000021276	-	98	38.200	ENSDNOG00000044555	-	93	38.200	Dasypus_novemcinctus
ENSCING00000021276	-	100	36.653	ENSDORG00000027343	Rnpc3	95	37.132	Dipodomys_ordii
ENSCING00000021276	-	98	35.050	ENSEBUG00000002068	rnpc3	95	35.306	Eptatretus_burgeri
ENSCING00000021276	-	98	38.540	ENSEASG00005015957	RNPC3	95	37.305	Equus_asinus_asinus
ENSCING00000021276	-	98	38.028	ENSECAG00000021148	RNPC3	95	37.016	Equus_caballus
ENSCING00000021276	-	99	38.310	ENSELUG00000002264	rnpc3	96	37.255	Esox_lucius
ENSCING00000021276	-	100	37.897	ENSFCAG00000024312	RNPC3	95	37.897	Felis_catus
ENSCING00000021276	-	90	38.022	ENSFALG00000002580	RNPC3	98	36.726	Ficedula_albicollis
ENSCING00000021276	-	99	38.622	ENSGMOG00000019213	rnpc3	94	38.155	Gadus_morhua
ENSCING00000021276	-	99	38.723	ENSGALG00000005162	RNPC3	88	37.728	Gallus_gallus
ENSCING00000021276	-	99	39.069	ENSIPUG00000002916	rnpc3	96	37.795	Ictalurus_punctatus
ENSCING00000021276	-	98	39.715	ENSSTOG00000025020	RNPC3	95	39.243	Ictidomys_tridecemlineatus
ENSCING00000021276	-	98	37.374	ENSJJAG00000010203	Rnpc3	95	36.905	Jaculus_jaculus
ENSCING00000021276	-	99	37.897	ENSLACG00000005720	RNPC3	89	38.160	Latimeria_chalumnae
ENSCING00000021276	-	98	37.751	ENSLAFG00000032342	RNPC3	95	37.278	Loxodonta_africana
ENSCING00000021276	-	98	37.675	ENSMFAG00000002004	RNPC3	95	37.598	Macaca_fascicularis
ENSCING00000021276	-	74	36.517	ENSMFAG00000002917	-	78	37.079	Macaca_fascicularis
ENSCING00000021276	-	100	37.721	ENSMMUG00000018039	RNPC3	95	38.114	Macaca_mulatta
ENSCING00000021276	-	72	43.125	ENSMMUG00000002098	-	92	32.979	Macaca_mulatta
ENSCING00000021276	-	98	35.070	ENSMNEG00000033950	RNPC3	94	35.039	Macaca_nemestrina
ENSCING00000021276	-	74	36.695	ENSMLEG00000034644	-	75	37.845	Mandrillus_leucophaeus
ENSCING00000021276	-	100	37.008	ENSMLEG00000033628	RNPC3	95	37.402	Mandrillus_leucophaeus
ENSCING00000021276	-	99	33.992	ENSMAMG00000007496	rnpc3	95	34.714	Mastacembelus_armatus
ENSCING00000021276	-	90	37.149	ENSMGAG00000006381	RNPC3	98	36.324	Meleagris_gallopavo
ENSCING00000021276	-	98	38.525	ENSMAUG00000001358	Rnpc3	95	38.028	Mesocricetus_auratus
ENSCING00000021276	-	98	37.675	ENSMICG00000029591	RNPC3	95	37.864	Microcebus_murinus
ENSCING00000021276	-	98	38.384	ENSMOCG00000013423	Rnpc3	95	38.114	Microtus_ochrogaster
ENSCING00000021276	-	99	38.277	ENSMODG00000002946	RNPC3	94	37.773	Monodelphis_domestica
ENSCING00000021276	-	100	38.048	MGP_CAROLIEiJ_G0025555	Rnpc3	96	37.747	Mus_caroli
ENSCING00000021276	-	100	38.171	ENSMUSG00000027981	Rnpc3	98	37.263	Mus_musculus
ENSCING00000021276	-	100	38.323	MGP_PahariEiJ_G0027001	Rnpc3	96	37.647	Mus_pahari
ENSCING00000021276	-	100	38.171	MGP_SPRETEiJ_G0026505	Rnpc3	96	38.039	Mus_spretus
ENSCING00000021276	-	100	38.048	ENSMPUG00000007349	RNPC3	95	37.769	Mustela_putorius_furo
ENSCING00000021276	-	99	38.730	ENSNBRG00000012196	rnpc3	92	38.730	Neolamprologus_brichardi
ENSCING00000021276	-	100	37.376	ENSNLEG00000012013	RNPC3	95	37.773	Nomascus_leucogenys
ENSCING00000021276	-	100	39.208	ENSODEG00000007612	RNPC3	95	38.552	Octodon_degus
ENSCING00000021276	-	98	38.911	ENSONIG00000004770	rnpc3	98	38.911	Oreochromis_niloticus
ENSCING00000021276	-	93	37.107	ENSOANG00000008220	RNPC3	98	37.888	Ornithorhynchus_anatinus
ENSCING00000021276	-	100	38.114	ENSOCUG00000004016	RNPC3	95	38.310	Oryctolagus_cuniculus
ENSCING00000021276	-	100	36.527	ENSOARG00000018719	RNPC3	95	36.527	Ovis_aries
ENSCING00000021276	-	100	37.325	ENSPPAG00000037459	RNPC3	95	37.725	Pan_paniscus
ENSCING00000021276	-	98	35.849	ENSPPAG00000030278	-	94	35.625	Pan_paniscus
ENSCING00000021276	-	100	37.598	ENSPPRG00000020246	RNPC3	95	37.598	Panthera_pardus
ENSCING00000021276	-	100	37.598	ENSPTIG00000009887	RNPC3	96	37.598	Panthera_tigris_altaica
ENSCING00000021276	-	100	37.525	ENSPTRG00000033902	RNPC3	95	37.917	Pan_troglodytes
ENSCING00000021276	-	98	34.461	ENSPANG00000029957	-	94	33.608	Papio_anubis
ENSCING00000021276	-	100	37.081	ENSPANG00000012137	RNPC3	95	37.475	Papio_anubis
ENSCING00000021276	-	91	35.076	ENSPEMG00000020112	Rnpc3	98	35.776	Peromyscus_maniculatus_bairdii
ENSCING00000021276	-	99	38.076	ENSPCIG00000004415	-	94	38.076	Phascolarctos_cinereus
ENSCING00000021276	-	84	32.949	ENSPPYG00000001102	RNPC3	95	32.648	Pongo_abelii
ENSCING00000021276	-	99	38.525	ENSPNYG00000020603	rnpc3	95	38.525	Pundamilia_nyererei
ENSCING00000021276	-	98	37.323	ENSRNOG00000017310	Rnpc3	95	37.200	Rattus_norvegicus
ENSCING00000021276	-	100	35.928	ENSRBIG00000043897	RNPC3	94	35.329	Rhinopithecus_bieti
ENSCING00000021276	-	100	37.525	ENSRROG00000032334	RNPC3	95	37.917	Rhinopithecus_roxellana
ENSCING00000021276	-	98	38.677	ENSSBOG00000024473	RNPC3	95	37.718	Saimiri_boliviensis_boliviensis
ENSCING00000021276	-	99	38.294	ENSSHAG00000011859	RNPC3	94	37.698	Sarcophilus_harrisii
ENSCING00000021276	-	98	38.618	ENSSSCG00000037254	RNPC3	95	38.039	Sus_scrofa
ENSCING00000021276	-	90	38.053	ENSTGUG00000004795	-	98	36.364	Taeniopygia_guttata
ENSCING00000021276	-	100	33.988	ENSXETG00000025027	rnpc3	96	32.755	Xenopus_tropicalis