EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000021395 (Gene tree)
Gene ID: 100176217
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1215 bases
Position: chr4:4970496-4971710
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032422	Nop53	PF07767.11	1.4e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000033410	-	1215	-	ENSCINP00000032422	404 (aa)	-	H2XRY8

Gene Model

Click here to download ENSCING00000021395's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000021395's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000021395	-	96	33.565	ENSG00000105373	NOP53	72	60.811	Homo_sapiens
ENSCING00000021395	-	96	33.647	ENSAPOG00000006446	nop53	89	33.647	Acanthochromis_polyacanthus
ENSCING00000021395	-	95	32.662	ENSAMEG00000015214	NOP53	88	32.151	Ailuropoda_melanoleuca
ENSCING00000021395	-	69	37.324	ENSACIG00000002467	nop53	77	37.324	Amphilophus_citrinellus
ENSCING00000021395	-	96	33.726	ENSAOCG00000007002	nop53	89	33.726	Amphiprion_ocellaris
ENSCING00000021395	-	96	34.118	ENSAPEG00000024564	nop53	89	34.118	Amphiprion_percula
ENSCING00000021395	-	92	33.333	ENSATEG00000021860	nop53	89	34.719	Anabas_testudineus
ENSCING00000021395	-	58	38.431	ENSACAG00000011362	-	84	36.800	Anolis_carolinensis
ENSCING00000021395	-	99	31.236	ENSANAG00000007933	NOP53	81	32.703	Aotus_nancymaae
ENSCING00000021395	-	96	34.346	ENSACLG00000011832	nop53	89	34.660	Astatotilapia_calliptera
ENSCING00000021395	-	96	35.198	ENSAMXG00000014883	nop53	89	34.906	Astyanax_mexicanus
ENSCING00000021395	-	96	33.718	ENSBTAG00000021192	NOP53	80	33.949	Bos_taurus
ENSCING00000021395	-	96	33.410	ENSCJAG00000011385	NOP53	88	32.558	Callithrix_jacchus
ENSCING00000021395	-	95	34.404	ENSCAFG00000004080	NOP53	88	33.565	Canis_familiaris
ENSCING00000021395	-	94	34.515	ENSCHIG00000009393	NOP53	87	34.752	Capra_hircus
ENSCING00000021395	-	95	32.706	ENSTSYG00000036631	NOP53	86	32.471	Carlito_syrichta
ENSCING00000021395	-	84	35.040	ENSCAPG00000013148	NOP53	92	35.040	Cavia_aperea
ENSCING00000021395	-	95	33.412	ENSCPOG00000015665	NOP53	87	33.810	Cavia_porcellus
ENSCING00000021395	-	96	33.953	ENSCCAG00000025477	NOP53	88	34.272	Cebus_capucinus
ENSCING00000021395	-	96	32.787	ENSCATG00000032842	NOP53	88	33.021	Cercocebus_atys
ENSCING00000021395	-	94	32.558	ENSCLAG00000001860	NOP53	87	32.558	Chinchilla_lanigera
ENSCING00000021395	-	96	32.483	ENSCSAG00000002928	NOP53	88	32.787	Chlorocebus_sabaeus
ENSCING00000021395	-	92	31.873	ENSCPBG00000009047	NOP53	95	32.360	Chrysemys_picta_bellii
ENSCING00000021395	-	97	69.211	ENSCSAVG00000006009	-	96	68.702	Ciona_savignyi
ENSCING00000021395	-	96	32.619	ENSCANG00000039648	NOP53	87	33.333	Colobus_angolensis_palliatus
ENSCING00000021395	-	94	34.499	ENSCGRG00001019033	Nop53	87	34.033	Cricetulus_griseus_chok1gshd
ENSCING00000021395	-	96	32.629	ENSCSEG00000014834	nop53	90	32.710	Cynoglossus_semilaevis
ENSCING00000021395	-	96	34.023	ENSCVAG00000005940	nop53	89	34.884	Cyprinodon_variegatus
ENSCING00000021395	-	96	34.353	ENSDARG00000100452	nop53	100	40.110	Danio_rerio
ENSCING00000021395	-	94	33.962	ENSDNOG00000005165	NOP53	79	33.411	Dasypus_novemcinctus
ENSCING00000021395	-	50	30.472	ENSDORG00000016339	-	78	30.472	Dipodomys_ordii
ENSCING00000021395	-	100	35.648	ENSEBUG00000012747	nop53	89	34.625	Eptatretus_burgeri
ENSCING00000021395	-	100	34.812	ENSEASG00005004345	NOP53	84	34.965	Equus_asinus_asinus
ENSCING00000021395	-	100	35.217	ENSECAG00000026850	NOP53	84	35.253	Equus_caballus
ENSCING00000021395	-	84	63.235	ENSEEUG00000005287	NOP53	65	63.235	Erinaceus_europaeus
ENSCING00000021395	-	96	33.882	ENSELUG00000001525	nop53	90	33.806	Esox_lucius
ENSCING00000021395	-	96	33.716	ENSFCAG00000010861	NOP53	87	34.033	Felis_catus
ENSCING00000021395	-	95	31.026	ENSFDAG00000010478	NOP53	86	30.310	Fukomys_damarensis
ENSCING00000021395	-	96	33.256	ENSFHEG00000017763	nop53	87	33.099	Fundulus_heteroclitus
ENSCING00000021395	-	96	32.933	ENSGMOG00000014299	nop53	89	32.212	Gadus_morhua
ENSCING00000021395	-	100	30.065	ENSGALG00000039473	NOP53	70	31.555	Gallus_gallus
ENSCING00000021395	-	97	32.648	ENSGAFG00000013301	nop53	88	32.558	Gambusia_affinis
ENSCING00000021395	-	96	31.308	ENSGACG00000005766	nop53	89	30.986	Gasterosteus_aculeatus
ENSCING00000021395	-	83	34.946	ENSGGOG00000005462	NOP53	78	34.667	Gorilla_gorilla
ENSCING00000021395	-	95	30.602	ENSGGOG00000024728	-	87	30.332	Gorilla_gorilla
ENSCING00000021395	-	96	34.346	ENSHBUG00000023625	nop53	89	34.660	Haplochromis_burtoni
ENSCING00000021395	-	95	32.644	ENSHGLG00000018240	NOP53	87	33.489	Heterocephalus_glaber_female
ENSCING00000021395	-	96	32.960	ENSHCOG00000017133	nop53	90	34.009	Hippocampus_comes
ENSCING00000021395	-	96	35.782	ENSIPUG00000008154	nop53	79	35.084	Ictalurus_punctatus
ENSCING00000021395	-	96	33.568	ENSSTOG00000022092	NOP53	88	32.864	Ictidomys_tridecemlineatus
ENSCING00000021395	-	95	32.432	ENSJJAG00000007854	Nop53	88	32.488	Jaculus_jaculus
ENSCING00000021395	-	91	32.029	ENSKMAG00000020756	nop53	89	32.266	Kryptolebias_marmoratus
ENSCING00000021395	-	96	31.925	ENSLBEG00000011432	nop53	89	32.075	Labrus_bergylta
ENSCING00000021395	-	92	35.142	ENSLACG00000018320	NOP53	100	36.538	Latimeria_chalumnae
ENSCING00000021395	-	97	31.221	ENSLOCG00000014178	nop53	89	31.265	Lepisosteus_oculatus
ENSCING00000021395	-	96	32.947	ENSMFAG00000045103	NOP53	88	32.483	Macaca_fascicularis
ENSCING00000021395	-	96	33.179	ENSMMUG00000013348	NOP53	85	32.483	Macaca_mulatta
ENSCING00000021395	-	96	32.947	ENSMNEG00000042540	NOP53	85	32.483	Macaca_nemestrina
ENSCING00000021395	-	96	34.259	ENSMAMG00000012652	nop53	90	34.411	Mastacembelus_armatus
ENSCING00000021395	-	83	35.342	ENSMZEG00005005033	nop53	82	34.890	Maylandia_zebra
ENSCING00000021395	-	96	34.803	ENSMAUG00000012617	Nop53	87	34.884	Mesocricetus_auratus
ENSCING00000021395	-	83	34.511	ENSMICG00000005580	NOP53	80	33.962	Microcebus_murinus
ENSCING00000021395	-	94	33.178	ENSMOCG00000008367	Nop53	87	33.491	Microtus_ochrogaster
ENSCING00000021395	-	96	33.017	ENSMMOG00000006515	nop53	89	33.729	Mola_mola
ENSCING00000021395	-	94	32.683	ENSMODG00000008721	NOP53	80	32.439	Monodelphis_domestica
ENSCING00000021395	-	96	32.634	ENSMALG00000020350	nop53	85	33.806	Monopterus_albus
ENSCING00000021395	-	96	32.731	MGP_CAROLIEiJ_G0029218	Nop53	88	32.426	Mus_caroli
ENSCING00000021395	-	96	32.506	ENSMUSG00000041560	Nop53	88	31.377	Mus_musculus
ENSCING00000021395	-	93	33.023	MGP_PahariEiJ_G0021074	-	96	31.925	Mus_pahari
ENSCING00000021395	-	96	32.127	MGP_SPRETEiJ_G0030298	Nop53	88	31.507	Mus_spretus
ENSCING00000021395	-	96	33.638	ENSMPUG00000004456	NOP53	88	32.952	Mustela_putorius_furo
ENSCING00000021395	-	62	38.321	ENSMLUG00000027066	-	100	36.496	Myotis_lucifugus
ENSCING00000021395	-	100	33.698	ENSNGAG00000019894	Nop53	85	33.882	Nannospalax_galili
ENSCING00000021395	-	91	34.465	ENSNBRG00000002057	nop53	82	34.115	Neolamprologus_brichardi
ENSCING00000021395	-	96	32.947	ENSNLEG00000003143	NOP53	88	33.255	Nomascus_leucogenys
ENSCING00000021395	-	95	32.955	ENSODEG00000006707	NOP53	88	32.037	Octodon_degus
ENSCING00000021395	-	96	34.803	ENSONIG00000016624	nop53	89	35.431	Oreochromis_niloticus
ENSCING00000021395	-	96	31.051	ENSORLG00000008659	nop53	89	31.504	Oryzias_latipes
ENSCING00000021395	-	96	31.343	ENSORLG00020019916	nop53	86	31.566	Oryzias_latipes_hni
ENSCING00000021395	-	96	32.536	ENSORLG00015001315	nop53	89	33.178	Oryzias_latipes_hsok
ENSCING00000021395	-	97	32.093	ENSOMEG00000018244	nop53	89	32.151	Oryzias_melastigma
ENSCING00000021395	-	89	60.563	ENSOGAG00000024300	NOP53	75	60.563	Otolemur_garnettii
ENSCING00000021395	-	61	32.727	ENSOARG00000011414	NOP53	56	33.094	Ovis_aries
ENSCING00000021395	-	83	31.436	ENSPPAG00000032995	-	77	31.635	Pan_paniscus
ENSCING00000021395	-	96	32.791	ENSPPAG00000002927	-	88	33.099	Pan_paniscus
ENSCING00000021395	-	96	33.641	ENSPPRG00000008954	NOP53	87	33.958	Panthera_pardus
ENSCING00000021395	-	95	30.645	ENSPTRG00000043520	-	88	30.930	Pan_troglodytes
ENSCING00000021395	-	96	33.565	ENSPTRG00000011215	NOP53	88	33.333	Pan_troglodytes
ENSCING00000021395	-	96	33.179	ENSPANG00000002964	NOP53	88	33.489	Papio_anubis
ENSCING00000021395	-	96	34.118	ENSPKIG00000000127	nop53	89	34.360	Paramormyrops_kingsleyae
ENSCING00000021395	-	96	33.021	ENSPMGG00000021579	nop53	89	33.174	Periophthalmus_magnuspinnatus
ENSCING00000021395	-	96	34.783	ENSPEMG00000006856	Nop53	88	33.485	Peromyscus_maniculatus_bairdii
ENSCING00000021395	-	99	30.562	ENSPCIG00000016718	NOP53	54	36.680	Phascolarctos_cinereus
ENSCING00000021395	-	96	32.569	ENSPFOG00000002839	nop53	89	32.333	Poecilia_formosa
ENSCING00000021395	-	96	32.569	ENSPLAG00000006675	nop53	89	32.333	Poecilia_latipinna
ENSCING00000021395	-	96	32.028	ENSPMEG00000009589	nop53	89	32.251	Poecilia_mexicana
ENSCING00000021395	-	96	30.896	ENSPREG00000008711	nop53	88	30.516	Poecilia_reticulata
ENSCING00000021395	-	94	33.017	ENSPPYG00000010181	NOP53	86	32.779	Pongo_abelii
ENSCING00000021395	-	84	33.867	ENSPCAG00000007692	NOP53	78	33.867	Procavia_capensis
ENSCING00000021395	-	68	60.526	ENSPCOG00000016124	NOP53	86	30.714	Propithecus_coquereli
ENSCING00000021395	-	61	38.321	ENSPVAG00000014671	NOP53	54	37.407	Pteropus_vampyrus
ENSCING00000021395	-	96	34.346	ENSPNYG00000001341	nop53	89	34.660	Pundamilia_nyererei
ENSCING00000021395	-	96	32.791	ENSPNAG00000012520	nop53	89	33.255	Pygocentrus_nattereri
ENSCING00000021395	-	94	34.107	ENSRNOG00000013023	Nop53	87	32.874	Rattus_norvegicus
ENSCING00000021395	-	94	33.647	ENSRBIG00000036427	NOP53	87	33.886	Rhinopithecus_bieti
ENSCING00000021395	-	94	33.647	ENSRROG00000042298	NOP53	87	33.886	Rhinopithecus_roxellana
ENSCING00000021395	-	96	32.947	ENSSBOG00000033115	NOP53	88	32.319	Saimiri_boliviensis_boliviensis
ENSCING00000021395	-	92	30.769	ENSSHAG00000002239	NOP53	100	30.288	Sarcophilus_harrisii
ENSCING00000021395	-	96	33.256	ENSSFOG00015007062	gltscr2	89	33.962	Scleropages_formosus
ENSCING00000021395	-	96	33.645	ENSSMAG00000000212	nop53	90	33.645	Scophthalmus_maximus
ENSCING00000021395	-	96	34.824	ENSSDUG00000010575	nop53	89	34.824	Seriola_dumerili
ENSCING00000021395	-	96	33.813	ENSSLDG00000000140	nop53	86	34.053	Seriola_lalandi_dorsalis
ENSCING00000021395	-	61	39.464	ENSSARG00000014109	NOP53	53	39.080	Sorex_araneus
ENSCING00000021395	-	83	31.868	ENSSPUG00000004420	NOP53	81	32.153	Sphenodon_punctatus
ENSCING00000021395	-	96	33.800	ENSSPAG00000000318	nop53	89	34.033	Stegastes_partitus
ENSCING00000021395	-	94	34.307	ENSSSCG00000022774	NOP53	86	34.063	Sus_scrofa
ENSCING00000021395	-	97	33.023	ENSTRUG00000004944	nop53	89	32.706	Takifugu_rubripes
ENSCING00000021395	-	96	33.710	ENSTTRG00000011831	NOP53	88	33.710	Tursiops_truncatus
ENSCING00000021395	-	95	33.025	ENSUAMG00000028254	NOP53	87	33.411	Ursus_americanus
ENSCING00000021395	-	93	43.966	ENSXETG00000002782	nop53	90	33.647	Xenopus_tropicalis
ENSCING00000021395	-	96	33.489	ENSXCOG00000004436	nop53	89	31.517	Xiphophorus_couchianus
ENSCING00000021395	-	96	33.641	ENSXMAG00000002589	nop53	89	32.168	Xiphophorus_maculatus