EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000021478 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
3484 bases
Position
chr14:781473-784956
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000032763GTP_EFTUPF00009.271.4e-5511
ENSCINP00000032763GTP_EFTU_D2PF03144.255.2e-1211
ENSCINP00000032763GTP_EFTU_D3PF03143.171.8e-4211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000033314-1477-ENSCINP00000032763460 (aa)-H2XSX9
Gene Model
Click here to download ENSCING00000021478's gene model file
Pathways
Pathway IDPathway NameSource
cin03013RNA transportKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000021478's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000021478-9882.405ENSAPOG00000004714-9981.878Acanthochromis_polyacanthus
ENSCING00000021478-8984.185ENSACIG00000001219-9984.185Amphilophus_citrinellus
ENSCING00000021478-8883.623ENSAOCG00000022002-9983.010Amphiprion_ocellaris
ENSCING00000021478-9982.751ENSAOCG00000022039-9982.751Amphiprion_ocellaris
ENSCING00000021478-9982.751ENSAPEG00000016361-9982.751Amphiprion_percula
ENSCING00000021478-9884.855ENSATEG00000003244-9684.279Anabas_testudineus
ENSCING00000021478-9985.120ENSACLG00000022560-9985.120Astatotilapia_calliptera
ENSCING00000021478-9979.303WBGene00001169eef-1A.29979.303Caenorhabditis_elegans
ENSCING00000021478-9979.303WBGene00001168eef-1A.19979.303Caenorhabditis_elegans
ENSCING00000021478-9978.465ENSCING00000007703-9978.465Ciona_intestinalis
ENSCING00000021478-9879.121ENSCING00000005126-9978.879Ciona_intestinalis
ENSCING00000021478-9883.444ENSCING00000018894-9982.900Ciona_intestinalis
ENSCING00000021478-9975.764ENSCSAVG00000001085-9075.764Ciona_savignyi
ENSCING00000021478-9992.511ENSCSAVG00000006357-9997.297Ciona_savignyi
ENSCING00000021478-9781.375ENSCSAVG00000009663-9980.870Ciona_savignyi
ENSCING00000021478-9780.574ENSCSAVG00000003196-9880.303Ciona_savignyi
ENSCING00000021478-9885.523ENSCSEG00000008011-9984.934Cynoglossus_semilaevis
ENSCING00000021478-9080.340ENSCSEG00000007992-9980.340Cynoglossus_semilaevis
ENSCING00000021478-9083.535ENSCSEG00000007972-9983.535Cynoglossus_semilaevis
ENSCING00000021478-9885.078ENSCVAG00000019356-9984.498Cyprinodon_variegatus
ENSCING00000021478-9980.131FBgn0284245eEF1alpha19980.131Drosophila_melanogaster
ENSCING00000021478-9881.778FBgn0000557eEF1alpha29981.264Drosophila_melanogaster
ENSCING00000021478-9979.913ENSEBUG00000015814-9979.913Eptatretus_burgeri
ENSCING00000021478-9984.532ENSFHEG00000015054-9984.532Fundulus_heteroclitus
ENSCING00000021478-9885.301ENSGAFG00000014646-9984.716Gambusia_affinis
ENSCING00000021478-9885.301ENSGACG00000002182-9984.716Gasterosteus_aculeatus
ENSCING00000021478-9984.279ENSGACG00000002143-9984.279Gasterosteus_aculeatus
ENSCING00000021478-5580.478ENSHBUG00000017166-9480.478Haplochromis_burtoni
ENSCING00000021478-9884.633ENSHCOG00000008468-9984.061Hippocampus_comes
ENSCING00000021478-9980.828ENSHCOG00000008489-9980.828Hippocampus_comes
ENSCING00000021478-9883.964ENSLBEG00000002759-9983.406Labrus_bergylta
ENSCING00000021478-9982.969ENSLBEG00000002955-9982.969Labrus_bergylta
ENSCING00000021478-9885.523ENSMAMG00000007715-9984.934Mastacembelus_armatus
ENSCING00000021478-9975.771ENSMMOG00000018160-9885.556Mola_mola
ENSCING00000021478-9884.633ENSMMOG00000001165-9889.535Mola_mola
ENSCING00000021478-9981.659ENSMMOG00000001106-9981.659Mola_mola
ENSCING00000021478-9975.274ENSNBRG00000017346-9975.274Neolamprologus_brichardi
ENSCING00000021478-7682.857ENSONIG00000017760-9882.857Oreochromis_niloticus
ENSCING00000021478-9884.410ENSORLG00000007614eef1a9983.843Oryzias_latipes
ENSCING00000021478-9984.967ENSORLG00015002397-9984.967Oryzias_latipes_hsok
ENSCING00000021478-9884.855ENSOMEG00000018226-9984.279Oryzias_melastigma
ENSCING00000021478-9349.192ENSPMGG00000022427-9658.750Periophthalmus_magnuspinnatus
ENSCING00000021478-9883.964ENSPMGG00000023911-9892.771Periophthalmus_magnuspinnatus
ENSCING00000021478-9885.078ENSPFOG00000003924-9884.498Poecilia_formosa
ENSCING00000021478-9885.078ENSPLAG00000004316-9984.498Poecilia_latipinna
ENSCING00000021478-9885.078ENSPMEG00000001010-9984.498Poecilia_mexicana
ENSCING00000021478-9984.532ENSPREG00000008243-9984.532Poecilia_reticulata
ENSCING00000021478-9985.120ENSPNYG00000007263-9985.120Pundamilia_nyererei
ENSCING00000021478-9677.652YBR118WTEF29976.856Saccharomyces_cerevisiae
ENSCING00000021478-9677.652YPR080WTEF19976.856Saccharomyces_cerevisiae
ENSCING00000021478-5379.918ENSSMAG00000016277-9881.283Scophthalmus_maximus
ENSCING00000021478-9874.522ENSSMAG00000018469-9974.167Scophthalmus_maximus
ENSCING00000021478-9883.964ENSSDUG00000008198-9983.406Seriola_dumerili
ENSCING00000021478-9882.628ENSSPAG00000001710-9982.096Stegastes_partitus
ENSCING00000021478-9885.078ENSTRUG00000005727ef-1a9984.498Takifugu_rubripes
ENSCING00000021478-9982.969ENSTRUG00000005066-9982.969Takifugu_rubripes
ENSCING00000021478-9885.301ENSTNIG00000002619-9984.716Tetraodon_nigroviridis
ENSCING00000021478-9781.879ENSTNIG00000002617-9381.879Tetraodon_nigroviridis
ENSCING00000021478-9885.078ENSXCOG00000001542-9893.976Xiphophorus_couchianus

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