EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000021535 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 10862 bases
Position: chr3:3281090-3291951
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032580	PAT1	PF09770.9	4.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000035555	-	2638	-	ENSCINP00000032580	580 (aa)	-	H2XSE6

Gene Model

Click here to download ENSCING00000021535's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000021535's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000021535	-	100	30.394	ENSG00000166889	PATL1	79	30.625	Homo_sapiens
ENSCING00000021535	-	76	32.189	ENSACIG00000005182	patl1	58	32.409	Amphilophus_citrinellus
ENSCING00000021535	-	76	32.196	ENSATEG00000002230	patl1	52	32.692	Anabas_testudineus
ENSCING00000021535	-	99	31.988	ENSACAG00000006607	PATL1	79	31.988	Anolis_carolinensis
ENSCING00000021535	-	100	30.079	ENSANAG00000023078	PATL1	79	30.469	Aotus_nancymaae
ENSCING00000021535	-	69	37.975	ENSAMXG00000010731	patl1	55	31.924	Astyanax_mexicanus
ENSCING00000021535	-	100	30.079	ENSCJAG00000016192	PATL1	85	30.625	Callithrix_jacchus
ENSCING00000021535	-	100	30.619	ENSCAFG00020001648	PATL1	86	30.156	Canis_lupus_dingo
ENSCING00000021535	-	100	30.782	ENSTSYG00000012748	PATL1	75	31.707	Carlito_syrichta
ENSCING00000021535	-	100	30.079	ENSCCAG00000023759	PATL1	79	30.469	Cebus_capucinus
ENSCING00000021535	-	100	30.236	ENSCATG00000009629	PATL1	79	30.625	Cercocebus_atys
ENSCING00000021535	-	76	32.225	ENSCSAG00000006095	PATL1	67	32.716	Chlorocebus_sabaeus
ENSCING00000021535	-	100	30.079	ENSCANG00000039197	PATL1	95	30.225	Colobus_angolensis_palliatus
ENSCING00000021535	-	62	31.783	ENSDNOG00000038865	PATL1	61	34.239	Dasypus_novemcinctus
ENSCING00000021535	-	100	30.343	ENSEASG00005007963	PATL1	85	30.251	Equus_asinus_asinus
ENSCING00000021535	-	67	30.617	ENSELUG00000023244	patl2	51	30.617	Esox_lucius
ENSCING00000021535	-	98	31.150	ENSFALG00000012150	PATL1	79	32.288	Ficedula_albicollis
ENSCING00000021535	-	99	30.975	ENSGALG00000042641	PATL1	80	31.596	Gallus_gallus
ENSCING00000021535	-	70	39.149	ENSGACG00000016448	patl1	60	37.367	Gasterosteus_aculeatus
ENSCING00000021535	-	98	30.392	ENSGAGG00000004461	PATL1	79	30.000	Gopherus_agassizii
ENSCING00000021535	-	100	30.159	ENSGGOG00000004335	PATL1	79	31.240	Gorilla_gorilla
ENSCING00000021535	-	83	51.282	ENSLBEG00000023617	patl1	56	51.282	Labrus_bergylta
ENSCING00000021535	-	77	31.158	ENSLOCG00000000717	patl1	61	51.351	Lepisosteus_oculatus
ENSCING00000021535	-	100	30.236	ENSMFAG00000040851	PATL1	79	30.625	Macaca_fascicularis
ENSCING00000021535	-	100	30.236	ENSMMUG00000017287	PATL1	79	30.625	Macaca_mulatta
ENSCING00000021535	-	100	30.236	ENSMNEG00000038692	PATL1	79	30.625	Macaca_nemestrina
ENSCING00000021535	-	100	30.079	ENSMLEG00000030044	PATL1	79	30.448	Mandrillus_leucophaeus
ENSCING00000021535	-	99	31.220	ENSMGAG00000003406	PATL1	86	31.379	Meleagris_gallopavo
ENSCING00000021535	-	81	36.158	ENSMAUG00000012059	Patl1	74	36.158	Mesocricetus_auratus
ENSCING00000021535	-	99	30.000	ENSMMOG00000013711	patl1	79	30.656	Mola_mola
ENSCING00000021535	-	100	30.247	MGP_CAROLIEiJ_G0022739	Patl1	79	30.275	Mus_caroli
ENSCING00000021535	-	100	30.327	MGP_PahariEiJ_G0014233	Patl1	79	30.046	Mus_pahari
ENSCING00000021535	-	100	30.337	ENSMLUG00000011169	PATL1	79	30.952	Myotis_lucifugus
ENSCING00000021535	-	100	30.394	ENSNLEG00000013081	PATL1	79	31.056	Nomascus_leucogenys
ENSCING00000021535	-	100	30.159	ENSPPAG00000034275	PATL1	79	31.401	Pan_paniscus
ENSCING00000021535	-	100	30.236	ENSPANG00000035620	PATL1	79	30.625	Papio_anubis
ENSCING00000021535	-	76	32.972	ENSPKIG00000016224	patl1	57	33.476	Paramormyrops_kingsleyae
ENSCING00000021535	-	98	30.079	ENSPSIG00000016206	PATL1	75	30.394	Pelodiscus_sinensis
ENSCING00000021535	-	98	30.189	ENSPCIG00000010852	PATL1	79	30.503	Phascolarctos_cinereus
ENSCING00000021535	-	100	30.079	ENSPPYG00000003230	PATL1	79	30.469	Pongo_abelii
ENSCING00000021535	-	100	30.210	ENSPCOG00000020770	PATL1	79	30.332	Propithecus_coquereli
ENSCING00000021535	-	98	30.149	ENSPNAG00000017907	patl1	81	30.133	Pygocentrus_nattereri
ENSCING00000021535	-	100	30.312	ENSRROG00000032861	PATL1	79	30.469	Rhinopithecus_roxellana
ENSCING00000021535	-	100	30.317	ENSSBOG00000025195	PATL1	79	30.918	Saimiri_boliviensis_boliviensis
ENSCING00000021535	-	78	32.759	ENSSFOG00015009614	patl1	56	34.475	Scleropages_formosus
ENSCING00000021535	-	98	30.793	ENSSPUG00000009453	PATL1	78	30.934	Sphenodon_punctatus
ENSCING00000021535	-	100	30.000	ENSSSCG00000013124	PATL1	85	30.124	Sus_scrofa
ENSCING00000021535	-	98	31.161	ENSTGUG00000006222	PATL1	79	31.479	Taeniopygia_guttata
ENSCING00000021535	-	76	31.749	ENSTRUG00000000709	patl1	77	32.604	Takifugu_rubripes
ENSCING00000021535	-	76	31.809	ENSUMAG00000018634	PATL1	80	30.528	Ursus_maritimus
ENSCING00000021535	-	100	30.619	ENSVVUG00000016668	PATL1	83	30.156	Vulpes_vulpes