EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000021618 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2845 bases
Position: chr1:8512550-8515394
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000029976	ResIII	PF04851.15	3.3e-09	1	1
ENSCINP00000029976	DEAD	PF00270.29	3.9e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000036204	-	2184	-	ENSCINP00000029976	728 (aa)	-	H2XJZ4

Gene Model

Click here to download ENSCING00000021618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000021618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000021618	-	89	52.984	ENSG00000178105	DDX10	75	56.795	Homo_sapiens
ENSCING00000021618	-	90	59.544	ENSAPOG00000009242	ddx10	79	49.852	Acanthochromis_polyacanthus
ENSCING00000021618	-	83	56.795	ENSAMEG00000009232	DDX10	75	56.795	Ailuropoda_melanoleuca
ENSCING00000021618	-	88	48.459	ENSACIG00000012927	ddx10	79	49.925	Amphilophus_citrinellus
ENSCING00000021618	-	82	59.544	ENSAOCG00000021917	ddx10	78	49.550	Amphiprion_ocellaris
ENSCING00000021618	-	83	59.544	ENSAPEG00000022230	ddx10	79	49.480	Amphiprion_percula
ENSCING00000021618	-	86	59.129	ENSATEG00000007227	ddx10	79	49.329	Anabas_testudineus
ENSCING00000021618	-	86	55.827	ENSAPLG00000011942	DDX10	83	59.006	Anas_platyrhynchos
ENSCING00000021618	-	85	57.115	ENSACAG00000005173	DDX10	83	60.430	Anolis_carolinensis
ENSCING00000021618	-	86	55.513	ENSANAG00000020864	DDX10	69	59.737	Aotus_nancymaae
ENSCING00000021618	-	86	56.757	ENSACLG00000003559	ddx10	78	48.955	Astatotilapia_calliptera
ENSCING00000021618	-	83	55.258	ENSAMXG00000006135	ddx10	69	57.928	Astyanax_mexicanus
ENSCING00000021618	-	89	53.345	ENSBTAG00000002382	DDX10	72	56.998	Bos_taurus
ENSCING00000021618	-	82	44.316	WBGene00021277	Y23H5B.6	83	45.098	Caenorhabditis_elegans
ENSCING00000021618	-	95	55.319	ENSCJAG00000010281	DDX10	67	59.519	Callithrix_jacchus
ENSCING00000021618	-	85	52.984	ENSCAFG00000014324	DDX10	77	56.795	Canis_familiaris
ENSCING00000021618	-	85	52.984	ENSCAFG00020007058	DDX10	77	56.795	Canis_lupus_dingo
ENSCING00000021618	-	87	52.803	ENSCHIG00000015147	DDX10	72	56.998	Capra_hircus
ENSCING00000021618	-	88	55.622	ENSTSYG00000003184	DDX10	69	58.913	Carlito_syrichta
ENSCING00000021618	-	89	50.551	ENSCPOG00000000865	DDX10	71	53.036	Cavia_porcellus
ENSCING00000021618	-	86	55.513	ENSCCAG00000024209	DDX10	69	59.737	Cebus_capucinus
ENSCING00000021618	-	86	42.495	ENSCATG00000040297	-	63	45.794	Cercocebus_atys
ENSCING00000021618	-	90	53.526	ENSCATG00000028487	DDX10	78	57.201	Cercocebus_atys
ENSCING00000021618	-	84	52.803	ENSCLAG00000013463	DDX10	70	59.219	Chinchilla_lanigera
ENSCING00000021618	-	76	56.433	ENSCSAG00000002948	DDX10	64	61.619	Chlorocebus_sabaeus
ENSCING00000021618	-	77	62.500	ENSCHOG00000001537	DDX10	54	66.197	Choloepus_hoffmanni
ENSCING00000021618	-	75	53.777	ENSCPBG00000021681	DDX10	73	57.551	Chrysemys_picta_bellii
ENSCING00000021618	-	69	78.643	ENSCSAVG00000003023	-	88	77.282	Ciona_savignyi
ENSCING00000021618	-	84	53.526	ENSCANG00000027716	DDX10	72	57.201	Colobus_angolensis_palliatus
ENSCING00000021618	-	79	38.132	ENSCANG00000038108	-	63	51.079	Colobus_angolensis_palliatus
ENSCING00000021618	-	85	56.615	ENSCGRG00001007099	Ddx10	67	60.573	Cricetulus_griseus_chok1gshd
ENSCING00000021618	-	85	56.615	ENSCGRG00000000153	Ddx10	67	60.573	Cricetulus_griseus_crigri
ENSCING00000021618	-	66	59.129	ENSCSEG00000002080	ddx10	83	49.849	Cynoglossus_semilaevis
ENSCING00000021618	-	83	49.920	ENSCVAG00000000109	ddx10	83	48.765	Cyprinodon_variegatus
ENSCING00000021618	-	85	55.865	ENSDARG00000061865	ddx10	77	48.876	Danio_rerio
ENSCING00000021618	-	68	55.098	ENSDNOG00000012542	DDX10	69	58.606	Dasypus_novemcinctus
ENSCING00000021618	-	87	54.545	ENSDORG00000014459	Ddx10	65	54.545	Dipodomys_ordii
ENSCING00000021618	-	87	42.878	FBgn0030855	CG5800	79	44.360	Drosophila_melanogaster
ENSCING00000021618	-	83	53.016	ENSEBUG00000007794	ddx10	77	55.645	Eptatretus_burgeri
ENSCING00000021618	-	81	55.319	ENSEASG00005010110	DDX10	72	59.737	Equus_asinus_asinus
ENSCING00000021618	-	88	55.319	ENSECAG00000010355	DDX10	76	59.737	Equus_caballus
ENSCING00000021618	-	80	48.944	ENSEEUG00000011164	DDX10	69	51.579	Erinaceus_europaeus
ENSCING00000021618	-	84	55.577	ENSELUG00000014515	ddx10	68	59.778	Esox_lucius
ENSCING00000021618	-	88	53.775	ENSFCAG00000007246	DDX10	71	56.998	Felis_catus
ENSCING00000021618	-	83	59.615	ENSFALG00000000449	DDX10	72	59.615	Ficedula_albicollis
ENSCING00000021618	-	88	48.986	ENSFHEG00000011340	ddx10	79	50.388	Fundulus_heteroclitus
ENSCING00000021618	-	90	47.820	ENSGAFG00000011210	ddx10	80	49.311	Gambusia_affinis
ENSCING00000021618	-	88	48.069	ENSGACG00000002948	ddx10	79	49.083	Gasterosteus_aculeatus
ENSCING00000021618	-	88	54.731	ENSGAGG00000023967	DDX10	79	59.348	Gopherus_agassizii
ENSCING00000021618	-	86	46.809	ENSGGOG00000043095	-	67	49.234	Gorilla_gorilla
ENSCING00000021618	-	89	53.165	ENSGGOG00000000271	-	72	56.795	Gorilla_gorilla
ENSCING00000021618	-	65	56.851	ENSGGOG00000043387	-	79	56.851	Gorilla_gorilla
ENSCING00000021618	-	86	56.950	ENSHBUG00000012476	ddx10	78	48.882	Haplochromis_burtoni
ENSCING00000021618	-	89	51.175	ENSHGLG00000013439	DDX10	65	56.893	Heterocephalus_glaber_female
ENSCING00000021618	-	73	53.526	ENSHGLG00100003298	DDX10	70	56.795	Heterocephalus_glaber_male
ENSCING00000021618	-	66	59.129	ENSHCOG00000010943	ddx10	80	49.085	Hippocampus_comes
ENSCING00000021618	-	62	39.009	ENSIPUG00000012876	ddx18	79	39.009	Ictalurus_punctatus
ENSCING00000021618	-	88	47.301	ENSIPUG00000024738	ddx10	77	48.674	Ictalurus_punctatus
ENSCING00000021618	-	73	53.526	ENSSTOG00000005213	DDX10	78	58.686	Ictidomys_tridecemlineatus
ENSCING00000021618	-	82	56.067	ENSJJAG00000014261	Ddx10	69	57.549	Jaculus_jaculus
ENSCING00000021618	-	84	56.262	ENSKMAG00000001578	ddx10	79	48.758	Kryptolebias_marmoratus
ENSCING00000021618	-	86	50.538	ENSLBEG00000011602	ddx10	78	50.713	Labrus_bergylta
ENSCING00000021618	-	84	56.262	ENSLOCG00000002074	ddx10	84	57.773	Lepisosteus_oculatus
ENSCING00000021618	-	83	56.016	ENSLAFG00000005951	DDX10	76	56.250	Loxodonta_africana
ENSCING00000021618	-	90	53.309	ENSMFAG00000045808	DDX10	65	57.201	Macaca_fascicularis
ENSCING00000021618	-	69	39.376	ENSMFAG00000042969	-	66	42.056	Macaca_fascicularis
ENSCING00000021618	-	69	38.596	ENSMMUG00000016025	-	63	41.355	Macaca_mulatta
ENSCING00000021618	-	89	53.526	ENSMMUG00000014415	DDX10	72	57.201	Macaca_mulatta
ENSCING00000021618	-	69	38.402	ENSMNEG00000039588	-	66	41.121	Macaca_nemestrina
ENSCING00000021618	-	89	53.526	ENSMNEG00000033513	DDX10	72	57.201	Macaca_nemestrina
ENSCING00000021618	-	89	40.936	ENSMLEG00000035477	-	64	43.925	Mandrillus_leucophaeus
ENSCING00000021618	-	89	53.526	ENSMLEG00000044081	DDX10	72	57.201	Mandrillus_leucophaeus
ENSCING00000021618	-	93	45.889	ENSMAMG00000022111	ddx10	76	49.696	Mastacembelus_armatus
ENSCING00000021618	-	86	56.757	ENSMZEG00005003586	ddx10	78	48.955	Maylandia_zebra
ENSCING00000021618	-	66	58.836	ENSMGAG00000015145	DDX10	81	58.836	Meleagris_gallopavo
ENSCING00000021618	-	84	54.430	ENSMICG00000035071	DDX10	72	58.012	Microcebus_murinus
ENSCING00000021618	-	85	56.164	ENSMOCG00000009915	Ddx10	72	59.912	Microtus_ochrogaster
ENSCING00000021618	-	88	46.176	ENSMMOG00000009042	ddx10	79	48.187	Mola_mola
ENSCING00000021618	-	88	56.154	ENSMODG00000014600	DDX10	72	58.125	Monodelphis_domestica
ENSCING00000021618	-	95	46.703	ENSMALG00000021441	ddx10	80	50.459	Monopterus_albus
ENSCING00000021618	-	85	56.031	MGP_CAROLIEiJ_G0032212	Ddx10	69	59.827	Mus_caroli
ENSCING00000021618	-	89	56.031	ENSMUSG00000053289	Ddx10	68	60.132	Mus_musculus
ENSCING00000021618	-	93	53.734	MGP_PahariEiJ_G0015080	Ddx10	71	56.795	Mus_pahari
ENSCING00000021618	-	89	56.031	MGP_SPRETEiJ_G0033352	Ddx10	68	60.132	Mus_spretus
ENSCING00000021618	-	88	53.591	ENSMPUG00000005921	DDX10	71	56.795	Mustela_putorius_furo
ENSCING00000021618	-	69	52.805	ENSMLUG00000001645	DDX10	68	56.893	Myotis_lucifugus
ENSCING00000021618	-	84	56.420	ENSNGAG00000010526	Ddx10	67	60.352	Nannospalax_galili
ENSCING00000021618	-	91	57.760	ENSNBRG00000016684	ddx10	78	49.323	Neolamprologus_brichardi
ENSCING00000021618	-	89	52.984	ENSNLEG00000007242	DDX10	72	56.592	Nomascus_leucogenys
ENSCING00000021618	-	65	44.118	ENSOPRG00000004266	DDX10	56	44.858	Ochotona_princeps
ENSCING00000021618	-	68	58.268	ENSONIG00000007263	ddx10	73	49.185	Oreochromis_niloticus
ENSCING00000021618	-	71	54.562	ENSOANG00000006243	DDX10	76	57.026	Ornithorhynchus_anatinus
ENSCING00000021618	-	85	56.607	ENSOCUG00000003843	DDX10	68	60.043	Oryctolagus_cuniculus
ENSCING00000021618	-	86	48.617	ENSORLG00000003073	ddx10	79	49.099	Oryzias_latipes
ENSCING00000021618	-	86	48.463	ENSORLG00015002672	ddx10	79	49.321	Oryzias_latipes_hsok
ENSCING00000021618	-	87	48.827	ENSOMEG00000007443	ddx10	79	50.229	Oryzias_melastigma
ENSCING00000021618	-	71	55.408	ENSOGAG00000010962	DDX10	70	59.698	Otolemur_garnettii
ENSCING00000021618	-	73	52.424	ENSOARG00000012714	DDX10	75	56.539	Ovis_aries
ENSCING00000021618	-	69	47.195	ENSPPAG00000032506	-	67	50.109	Pan_paniscus
ENSCING00000021618	-	89	53.165	ENSPPAG00000035222	DDX10	71	56.795	Pan_paniscus
ENSCING00000021618	-	88	53.775	ENSPPRG00000005990	DDX10	71	56.998	Panthera_pardus
ENSCING00000021618	-	83	56.998	ENSPTIG00000010152	DDX10	71	56.998	Panthera_tigris_altaica
ENSCING00000021618	-	89	53.345	ENSPTRG00000004256	DDX10	72	56.795	Pan_troglodytes
ENSCING00000021618	-	86	47.969	ENSPTRG00000047351	-	68	50.985	Pan_troglodytes
ENSCING00000021618	-	89	53.526	ENSPANG00000015325	DDX10	72	57.201	Papio_anubis
ENSCING00000021618	-	79	47.173	ENSPANG00000029813	-	67	51.636	Papio_anubis
ENSCING00000021618	-	83	58.506	ENSPKIG00000015739	ddx10	74	59.341	Paramormyrops_kingsleyae
ENSCING00000021618	-	77	61.149	ENSPSIG00000014874	DDX10	85	57.613	Pelodiscus_sinensis
ENSCING00000021618	-	85	48.430	ENSPMGG00000008344	ddx10	79	49.845	Periophthalmus_magnuspinnatus
ENSCING00000021618	-	90	52.724	ENSPEMG00000017492	Ddx10	71	56.388	Peromyscus_maniculatus_bairdii
ENSCING00000021618	-	88	54.833	ENSPCIG00000003013	DDX10	87	60.000	Phascolarctos_cinereus
ENSCING00000021618	-	89	47.727	ENSPFOG00000013021	ddx10	80	48.851	Poecilia_formosa
ENSCING00000021618	-	89	47.727	ENSPLAG00000009048	ddx10	80	48.851	Poecilia_latipinna
ENSCING00000021618	-	89	47.727	ENSPMEG00000004541	ddx10	80	48.851	Poecilia_mexicana
ENSCING00000021618	-	90	47.250	ENSPREG00000019559	ddx10	79	48.545	Poecilia_reticulata
ENSCING00000021618	-	89	53.345	ENSPPYG00000003849	DDX10	72	56.998	Pongo_abelii
ENSCING00000021618	-	68	45.635	ENSPCAG00000012949	DDX10	54	55.128	Procavia_capensis
ENSCING00000021618	-	77	58.407	ENSPCOG00000020289	DDX10	69	55.291	Propithecus_coquereli
ENSCING00000021618	-	80	49.130	ENSPVAG00000007371	DDX10	72	52.735	Pteropus_vampyrus
ENSCING00000021618	-	70	56.757	ENSPNYG00000001756	ddx10	78	48.802	Pundamilia_nyererei
ENSCING00000021618	-	83	57.700	ENSPNAG00000017154	ddx10	79	48.012	Pygocentrus_nattereri
ENSCING00000021618	-	90	55.837	ENSRNOG00000012500	Ddx10	67	59.912	Rattus_norvegicus
ENSCING00000021618	-	80	39.847	ENSRBIG00000038689	-	59	43.023	Rhinopithecus_bieti
ENSCING00000021618	-	89	50.814	ENSRBIG00000040612	DDX10	71	54.158	Rhinopithecus_bieti
ENSCING00000021618	-	89	53.526	ENSRROG00000031744	DDX10	72	57.201	Rhinopithecus_roxellana
ENSCING00000021618	-	76	42.975	YJL033W	HCA4	61	49.788	Saccharomyces_cerevisiae
ENSCING00000021618	-	86	55.899	ENSSBOG00000022735	DDX10	72	57.606	Saimiri_boliviensis_boliviensis
ENSCING00000021618	-	90	46.703	ENSSFOG00015007982	ddx10	77	49.011	Scleropages_formosus
ENSCING00000021618	-	89	59.789	ENSSMAG00000018735	ddx10	79	49.474	Scophthalmus_maximus
ENSCING00000021618	-	82	58.921	ENSSDUG00000018245	ddx10	79	48.430	Seriola_dumerili
ENSCING00000021618	-	82	58.921	ENSSLDG00000012041	ddx10	79	48.879	Seriola_lalandi_dorsalis
ENSCING00000021618	-	67	56.400	ENSSARG00000004103	DDX10	52	59.692	Sorex_araneus
ENSCING00000021618	-	84	53.606	ENSSPUG00000017612	DDX10	74	56.129	Sphenodon_punctatus
ENSCING00000021618	-	89	47.413	ENSSPAG00000015548	ddx10	78	58.403	Stegastes_partitus
ENSCING00000021618	-	83	58.264	ENSTGUG00000012605	DDX10	77	58.264	Taeniopygia_guttata
ENSCING00000021618	-	87	47.896	ENSTRUG00000010881	ddx10	78	48.411	Takifugu_rubripes
ENSCING00000021618	-	87	48.035	ENSTNIG00000010477	ddx10	81	47.898	Tetraodon_nigroviridis
ENSCING00000021618	-	63	49.891	ENSTBEG00000006321	DDX10	56	49.891	Tupaia_belangeri
ENSCING00000021618	-	88	46.457	ENSTTRG00000006068	DDX10	68	49.234	Tursiops_truncatus
ENSCING00000021618	-	67	55.020	ENSUAMG00000014176	DDX10	87	59.589	Ursus_americanus
ENSCING00000021618	-	83	56.795	ENSUMAG00000007300	DDX10	78	56.795	Ursus_maritimus
ENSCING00000021618	-	80	59.091	ENSVPAG00000010185	DDX10	73	59.091	Vicugna_pacos
ENSCING00000021618	-	85	53.165	ENSVVUG00000015484	DDX10	80	56.998	Vulpes_vulpes
ENSCING00000021618	-	64	60.085	ENSXETG00000014458	ddx10	67	61.369	Xenopus_tropicalis
ENSCING00000021618	-	89	47.863	ENSXCOG00000003080	ddx10	82	48.698	Xiphophorus_couchianus
ENSCING00000021618	-	90	47.257	ENSXMAG00000016515	ddx10	80	48.698	Xiphophorus_maculatus