EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000021624 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: transcription elongation factor SPT5
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 16834 bases
Position: chr10:22666-39499
Accession: 100178802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000030091	KOW	PF00467.29	1.4e-20	1	2
ENSCINP00000030091	KOW	PF00467.29	1.4e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000037202	-	3198	XM_009861582	ENSCINP00000030091	1047 (aa)	XP_009859884	H2XKA9

Gene Model

Click here to download ENSCING00000021624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000021624's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000021624	-	93	60.765	ENSG00000196235	SUPT5H	95	64.602	Homo_sapiens
ENSCING00000021624	-	93	55.388	ENSAPOG00000012970	supt5h	94	53.116	Acanthochromis_polyacanthus
ENSCING00000021624	-	93	60.926	ENSAMEG00000008382	SUPT5H	94	58.984	Ailuropoda_melanoleuca
ENSCING00000021624	-	93	50.204	ENSACIG00000021245	supt5h	93	60.058	Amphilophus_citrinellus
ENSCING00000021624	-	93	59.350	ENSAOCG00000001136	supt5h	94	57.196	Amphiprion_ocellaris
ENSCING00000021624	-	93	56.623	ENSAPEG00000021060	supt5h	90	56.509	Amphiprion_percula
ENSCING00000021624	-	93	61.055	ENSATEG00000002626	supt5h	94	59.270	Anabas_testudineus
ENSCING00000021624	-	93	60.830	ENSACAG00000000375	SUPT5H	94	59.211	Anolis_carolinensis
ENSCING00000021624	-	93	60.563	ENSANAG00000033469	SUPT5H	94	58.647	Aotus_nancymaae
ENSCING00000021624	-	93	58.687	ENSACLG00000011374	supt5h	89	58.165	Astatotilapia_calliptera
ENSCING00000021624	-	93	61.156	ENSAMXG00000009128	supt5h	94	58.840	Astyanax_mexicanus
ENSCING00000021624	-	93	60.865	ENSBTAG00000010467	SUPT5H	94	58.929	Bos_taurus
ENSCING00000021624	-	89	40.019	WBGene00005015	spt-5	85	41.031	Caenorhabditis_elegans
ENSCING00000021624	-	93	60.463	ENSCJAG00000014182	SUPT5H	94	58.553	Callithrix_jacchus
ENSCING00000021624	-	93	60.765	ENSCAFG00000005469	SUPT5H	94	58.835	Canis_familiaris
ENSCING00000021624	-	93	59.372	ENSCAFG00020015732	SUPT5H	92	59.875	Canis_lupus_dingo
ENSCING00000021624	-	93	60.765	ENSCHIG00000023821	SUPT5H	94	58.835	Capra_hircus
ENSCING00000021624	-	93	60.446	ENSTSYG00000010636	SUPT5H	88	60.263	Carlito_syrichta
ENSCING00000021624	-	93	59.939	ENSCAPG00000008285	SUPT5H	90	59.188	Cavia_aperea
ENSCING00000021624	-	93	60.526	ENSCPOG00000011367	SUPT5H	94	58.459	Cavia_porcellus
ENSCING00000021624	-	93	60.563	ENSCCAG00000034052	SUPT5H	94	58.647	Cebus_capucinus
ENSCING00000021624	-	93	60.765	ENSCATG00000035589	SUPT5H	94	58.835	Cercocebus_atys
ENSCING00000021624	-	93	60.526	ENSCLAG00000013796	SUPT5H	94	58.365	Chinchilla_lanigera
ENSCING00000021624	-	93	60.765	ENSCSAG00000003826	SUPT5H	94	58.835	Chlorocebus_sabaeus
ENSCING00000021624	-	93	61.055	ENSCPBG00000018792	SUPT5H	98	61.301	Chrysemys_picta_bellii
ENSCING00000021624	-	100	86.515	ENSCSAVG00000000030	-	94	86.230	Ciona_savignyi
ENSCING00000021624	-	93	60.765	ENSCANG00000043752	SUPT5H	94	58.835	Colobus_angolensis_palliatus
ENSCING00000021624	-	93	60.812	ENSCGRG00001012522	Supt5	94	58.796	Cricetulus_griseus_chok1gshd
ENSCING00000021624	-	93	60.812	ENSCGRG00000006779	Supt5	90	58.767	Cricetulus_griseus_crigri
ENSCING00000021624	-	74	53.419	ENSCSEG00000017151	-	93	52.699	Cynoglossus_semilaevis
ENSCING00000021624	-	87	56.587	ENSCSEG00000015699	supt5h	91	54.995	Cynoglossus_semilaevis
ENSCING00000021624	-	93	60.203	ENSCVAG00000007501	supt5h	94	58.170	Cyprinodon_variegatus
ENSCING00000021624	-	93	60.830	ENSDARG00000042724	supt5h	96	59.112	Danio_rerio
ENSCING00000021624	-	93	60.765	ENSDNOG00000033920	SUPT5H	98	58.835	Dasypus_novemcinctus
ENSCING00000021624	-	93	57.230	ENSDORG00000016582	Supt5	94	55.482	Dipodomys_ordii
ENSCING00000021624	-	92	48.126	FBgn0040273	Spt5	88	46.914	Drosophila_melanogaster
ENSCING00000021624	-	88	58.396	ENSEBUG00000011892	supt5h	93	58.137	Eptatretus_burgeri
ENSCING00000021624	-	93	60.161	ENSEASG00005011861	SUPT5H	93	60.397	Equus_asinus_asinus
ENSCING00000021624	-	93	60.161	ENSECAG00000013309	SUPT5H	93	60.946	Equus_caballus
ENSCING00000021624	-	93	55.081	ENSEEUG00000012879	SUPT5H	93	53.282	Erinaceus_europaeus
ENSCING00000021624	-	98	58.947	ENSELUG00000011402	supt5h	94	58.967	Esox_lucius
ENSCING00000021624	-	93	60.765	ENSFCAG00000010744	SUPT5H	94	58.835	Felis_catus
ENSCING00000021624	-	93	60.628	ENSFDAG00000015803	SUPT5H	94	58.608	Fukomys_damarensis
ENSCING00000021624	-	93	58.537	ENSFHEG00000012497	supt5h	91	57.791	Fundulus_heteroclitus
ENSCING00000021624	-	85	62.021	ENSGMOG00000003422	supt5h	87	58.791	Gadus_morhua
ENSCING00000021624	-	98	53.048	ENSGACG00000004934	supt5h	94	53.184	Gasterosteus_aculeatus
ENSCING00000021624	-	90	60.543	ENSGAGG00000019112	SUPT5H	98	61.301	Gopherus_agassizii
ENSCING00000021624	-	93	60.765	ENSGGOG00000014425	SUPT5H	94	58.459	Gorilla_gorilla
ENSCING00000021624	-	93	60.790	ENSHBUG00000017144	supt5h	94	59.134	Haplochromis_burtoni
ENSCING00000021624	-	93	60.526	ENSHGLG00000018339	SUPT5H	96	58.459	Heterocephalus_glaber_female
ENSCING00000021624	-	93	60.020	ENSHGLG00100017126	SUPT5H	94	57.989	Heterocephalus_glaber_male
ENSCING00000021624	-	93	59.533	ENSHCOG00000004932	supt5h	94	57.865	Hippocampus_comes
ENSCING00000021624	-	93	61.562	ENSIPUG00000007308	supt5h	95	59.198	Ictalurus_punctatus
ENSCING00000021624	-	93	60.463	ENSSTOG00000026638	SUPT5H	94	58.553	Ictidomys_tridecemlineatus
ENSCING00000021624	-	93	60.852	ENSJJAG00000022374	Supt5	94	58.663	Jaculus_jaculus
ENSCING00000021624	-	89	59.029	ENSKMAG00000004401	supt5h	94	56.701	Kryptolebias_marmoratus
ENSCING00000021624	-	93	61.320	ENSLACG00000008663	SUPT5H	94	59.714	Latimeria_chalumnae
ENSCING00000021624	-	65	64.740	ENSLOCG00000014703	SUPT5H	74	87.097	Lepisosteus_oculatus
ENSCING00000021624	-	94	58.267	ENSLAFG00000027736	SUPT5H	94	56.554	Loxodonta_africana
ENSCING00000021624	-	93	60.765	ENSMFAG00000038707	SUPT5H	94	58.835	Macaca_fascicularis
ENSCING00000021624	-	93	60.765	ENSMMUG00000019372	SUPT5H	94	58.835	Macaca_mulatta
ENSCING00000021624	-	93	60.765	ENSMNEG00000041553	SUPT5H	94	58.835	Macaca_nemestrina
ENSCING00000021624	-	93	60.765	ENSMLEG00000036432	SUPT5H	94	58.835	Mandrillus_leucophaeus
ENSCING00000021624	-	93	60.628	ENSMAMG00000019715	supt5h	99	59.659	Mastacembelus_armatus
ENSCING00000021624	-	93	60.526	ENSMZEG00005024864	supt5h	94	58.890	Maylandia_zebra
ENSCING00000021624	-	93	61.624	ENSMGAG00000012449	SUPT5H	94	59.381	Meleagris_gallopavo
ENSCING00000021624	-	93	57.462	ENSMAUG00000009006	Supt5	94	56.056	Mesocricetus_auratus
ENSCING00000021624	-	93	60.865	ENSMICG00000006115	SUPT5H	99	58.920	Microcebus_murinus
ENSCING00000021624	-	93	60.812	ENSMOCG00000012211	Supt5	94	59.095	Microtus_ochrogaster
ENSCING00000021624	-	93	59.797	ENSMMOG00000009770	supt5h	91	59.574	Mola_mola
ENSCING00000021624	-	93	56.244	ENSMODG00000013570	SUPT5H	94	56.439	Monodelphis_domestica
ENSCING00000021624	-	93	61.032	ENSMALG00000017833	supt5h	94	59.346	Monopterus_albus
ENSCING00000021624	-	93	61.156	MGP_CAROLIEiJ_G0029441	Supt5	94	58.624	Mus_caroli
ENSCING00000021624	-	93	61.156	ENSMUSG00000003435	Supt5	94	58.530	Mus_musculus
ENSCING00000021624	-	93	61.359	MGP_PahariEiJ_G0012677	Supt5	94	59.095	Mus_pahari
ENSCING00000021624	-	93	61.156	MGP_SPRETEiJ_G0030539	Supt5	94	58.624	Mus_spretus
ENSCING00000021624	-	93	60.765	ENSMPUG00000017721	SUPT5H	94	58.835	Mustela_putorius_furo
ENSCING00000021624	-	93	60.563	ENSMLUG00000013886	-	94	58.647	Myotis_lucifugus
ENSCING00000021624	-	93	58.107	ENSMLUG00000008079	-	89	58.198	Myotis_lucifugus
ENSCING00000021624	-	93	61.015	ENSNGAG00000022458	Supt5	94	58.530	Nannospalax_galili
ENSCING00000021624	-	69	62.308	ENSNBRG00000005030	supt5h	61	62.462	Neolamprologus_brichardi
ENSCING00000021624	-	93	58.576	ENSNLEG00000014365	SUPT5H	94	56.435	Nomascus_leucogenys
ENSCING00000021624	-	91	57.318	ENSMEUG00000016423	SUPT5H	92	57.560	Notamacropus_eugenii
ENSCING00000021624	-	93	57.724	ENSOPRG00000016844	SUPT5H	97	55.430	Ochotona_princeps
ENSCING00000021624	-	93	60.425	ENSODEG00000016445	SUPT5H	94	58.271	Octodon_degus
ENSCING00000021624	-	93	60.790	ENSONIG00000001100	supt5h	94	59.134	Oreochromis_niloticus
ENSCING00000021624	-	78	63.966	ENSOANG00000008175	SUPT5H	99	60.778	Ornithorhynchus_anatinus
ENSCING00000021624	-	93	60.609	ENSOCUG00000002155	SUPT5H	94	58.435	Oryctolagus_cuniculus
ENSCING00000021624	-	93	60.102	ENSORLG00000000394	supt5h	94	58.679	Oryzias_latipes
ENSCING00000021624	-	93	60.203	ENSORLG00020021680	supt5h	94	58.774	Oryzias_latipes_hni
ENSCING00000021624	-	93	60.203	ENSORLG00015010686	supt5h	94	58.774	Oryzias_latipes_hsok
ENSCING00000021624	-	93	60.725	ENSOGAG00000033979	SUPT5H	94	58.796	Otolemur_garnettii
ENSCING00000021624	-	93	60.402	ENSOARG00000006174	SUPT5H	94	58.404	Ovis_aries
ENSCING00000021624	-	93	60.765	ENSPPAG00000040180	SUPT5H	94	58.835	Pan_paniscus
ENSCING00000021624	-	93	60.664	ENSPPRG00000009686	SUPT5H	94	58.741	Panthera_pardus
ENSCING00000021624	-	93	60.765	ENSPTIG00000011633	SUPT5H	94	58.835	Panthera_tigris_altaica
ENSCING00000021624	-	93	60.765	ENSPTRG00000010971	SUPT5H	94	58.835	Pan_troglodytes
ENSCING00000021624	-	93	60.765	ENSPANG00000007383	SUPT5H	94	58.835	Papio_anubis
ENSCING00000021624	-	93	61.196	ENSPKIG00000006261	supt5h	94	59.774	Paramormyrops_kingsleyae
ENSCING00000021624	-	93	58.753	ENSPSIG00000014117	SUPT5H	94	56.623	Pelodiscus_sinensis
ENSCING00000021624	-	93	58.300	ENSPMGG00000020581	supt5h	95	58.586	Periophthalmus_magnuspinnatus
ENSCING00000021624	-	93	60.711	ENSPEMG00000015730	Supt5	94	58.530	Peromyscus_maniculatus_bairdii
ENSCING00000021624	-	93	59.920	ENSPMAG00000006913	supt5h	94	57.714	Petromyzon_marinus
ENSCING00000021624	-	93	60.463	ENSPCIG00000010477	SUPT5H	94	58.575	Phascolarctos_cinereus
ENSCING00000021624	-	97	57.834	ENSPFOG00000011126	supt5h	100	57.429	Poecilia_formosa
ENSCING00000021624	-	93	60.102	ENSPLAG00000013092	supt5h	94	57.890	Poecilia_latipinna
ENSCING00000021624	-	91	60.453	ENSPMEG00000020479	supt5h	98	58.184	Poecilia_mexicana
ENSCING00000021624	-	98	56.731	ENSPREG00000006712	supt5h	94	56.900	Poecilia_reticulata
ENSCING00000021624	-	93	59.919	ENSPPYG00000009968	SUPT5H	94	58.043	Pongo_abelii
ENSCING00000021624	-	93	51.811	ENSPCAG00000010830	SUPT5H	94	50.376	Procavia_capensis
ENSCING00000021624	-	93	60.865	ENSPCOG00000021231	SUPT5H	99	58.294	Propithecus_coquereli
ENSCING00000021624	-	69	66.216	ENSPVAG00000011129	SUPT5H	64	66.216	Pteropus_vampyrus
ENSCING00000021624	-	93	58.847	ENSPNYG00000009203	supt5h	89	58.325	Pundamilia_nyererei
ENSCING00000021624	-	93	55.781	ENSPNAG00000010925	supt5h	92	54.453	Pygocentrus_nattereri
ENSCING00000021624	-	93	59.169	ENSRNOG00000032034	Supt5h	100	60.902	Rattus_norvegicus
ENSCING00000021624	-	93	59.960	ENSRBIG00000039828	SUPT5H	93	56.391	Rhinopithecus_bieti
ENSCING00000021624	-	93	60.765	ENSRROG00000019625	SUPT5H	94	58.835	Rhinopithecus_roxellana
ENSCING00000021624	-	93	60.563	ENSSBOG00000022657	SUPT5H	94	58.647	Saimiri_boliviensis_boliviensis
ENSCING00000021624	-	89	57.380	ENSSHAG00000009504	SUPT5H	93	57.845	Sarcophilus_harrisii
ENSCING00000021624	-	93	61.484	ENSSFOG00015005973	supt5h	94	59.793	Scleropages_formosus
ENSCING00000021624	-	91	60.264	ENSSMAG00000004503	supt5h	98	58.812	Scophthalmus_maximus
ENSCING00000021624	-	93	61.055	ENSSDUG00000014520	supt5h	94	59.176	Seriola_dumerili
ENSCING00000021624	-	95	58.992	ENSSLDG00000008112	supt5h	94	59.091	Seriola_lalandi_dorsalis
ENSCING00000021624	-	89	57.611	ENSSPUG00000011434	SUPT5H	89	57.445	Sphenodon_punctatus
ENSCING00000021624	-	93	60.284	ENSSPAG00000010429	supt5h	94	58.559	Stegastes_partitus
ENSCING00000021624	-	93	58.877	ENSSSCG00000023556	SUPT5H	94	57.332	Sus_scrofa
ENSCING00000021624	-	93	59.451	ENSTRUG00000002370	supt5h	94	57.598	Takifugu_rubripes
ENSCING00000021624	-	93	59.899	ENSTNIG00000011178	supt5h	94	57.761	Tetraodon_nigroviridis
ENSCING00000021624	-	64	55.313	ENSTBEG00000017617	SUPT5H	94	55.344	Tupaia_belangeri
ENSCING00000021624	-	93	59.759	ENSTTRG00000003573	SUPT5H	94	58.083	Tursiops_truncatus
ENSCING00000021624	-	93	60.865	ENSUAMG00000020014	SUPT5H	94	58.929	Ursus_americanus
ENSCING00000021624	-	93	60.865	ENSUMAG00000019558	SUPT5H	94	58.177	Ursus_maritimus
ENSCING00000021624	-	89	60.778	ENSVVUG00000006193	SUPT5H	87	60.952	Vulpes_vulpes
ENSCING00000021624	-	94	59.762	ENSXETG00000002888	supt5h	94	58.122	Xenopus_tropicalis
ENSCING00000021624	-	98	56.964	ENSXMAG00000004169	supt5h	94	56.752	Xiphophorus_maculatus