EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCING00000021895 (Gene tree)
Gene ID
100177395
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_intestinalis
Status
putative
Strand
Plus strand
Length
1782 bases
Position
chr2:3390038-3391819
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCINP00000034938RNA_pol_A_bacPF01000.265.8e-3511
ENSCINP00000034938RNA_pol_LPF01193.242.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCINT00000036263-916-ENSCINP00000034938286 (aa)-H2XZ54
Gene Model
Click here to download ENSCING00000021895's gene model file
Pathways
Pathway IDPathway NameSource
cin03020RNA polymeraseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000021895's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCING00000021895-9962.544ENSG00000102978POLR2C10071.739Homo_sapiens
ENSCING00000021895-6531.633ENSG00000171453POLR1C7432.990Homo_sapiens
ENSCING00000021895-9730.435ENSAPOG00000024356polr1c8330.100Acanthochromis_polyacanthus
ENSCING00000021895-9963.251ENSAPOG00000011708polr2c9563.251Acanthochromis_polyacanthus
ENSCING00000021895-9962.898ENSAMEG00000017026POLR2C9562.898Ailuropoda_melanoleuca
ENSCING00000021895-9962.898ENSACIG00000012060polr2c9562.898Amphilophus_citrinellus
ENSCING00000021895-9963.251ENSAOCG00000015665polr2c9563.251Amphiprion_ocellaris
ENSCING00000021895-8862.055ENSAOCG00000018000-8762.055Amphiprion_ocellaris
ENSCING00000021895-9963.251ENSAOCG00000010477-9563.251Amphiprion_ocellaris
ENSCING00000021895-9963.251ENSAPEG00000007221polr2c9563.251Amphiprion_percula
ENSCING00000021895-9963.251ENSATEG00000007143polr2c9563.251Anabas_testudineus
ENSCING00000021895-9761.011ENSAPLG00000005385POLR2C9261.011Anas_platyrhynchos
ENSCING00000021895-9964.311ENSACAG00000007514-9564.311Anolis_carolinensis
ENSCING00000021895-6531.795ENSACAG00000009764POLR1C5431.795Anolis_carolinensis
ENSCING00000021895-7656.481ENSACAG00000011302-9756.481Anolis_carolinensis
ENSCING00000021895-9962.544ENSANAG00000005302POLR2C9562.544Aotus_nancymaae
ENSCING00000021895-5930.726ENSANAG00000025805POLR1C5930.726Aotus_nancymaae
ENSCING00000021895-9963.251ENSACLG00000004854polr2c9563.251Astatotilapia_calliptera
ENSCING00000021895-9962.191ENSAMXG00000012805polr2c9563.251Astyanax_mexicanus
ENSCING00000021895-9962.898ENSBTAG00000001856POLR2C9562.898Bos_taurus
ENSCING00000021895-9951.736WBGene00007971rpb-39551.736Caenorhabditis_elegans
ENSCING00000021895-9962.544ENSCJAG00000012016POLR2C9562.544Callithrix_jacchus
ENSCING00000021895-5931.844ENSCJAG00000005594POLR1C5931.844Callithrix_jacchus
ENSCING00000021895-9962.898ENSCAFG00000008720POLR2C9562.898Canis_familiaris
ENSCING00000021895-9962.898ENSCAFG00020007660POLR2C9562.898Canis_lupus_dingo
ENSCING00000021895-9962.898ENSCHIG00000012072POLR2C9562.898Capra_hircus
ENSCING00000021895-9962.191ENSTSYG00000011076POLR2C9562.191Carlito_syrichta
ENSCING00000021895-5930.726ENSTSYG00000011921POLR1C5930.726Carlito_syrichta
ENSCING00000021895-6959.694ENSCAPG00000006608POLR2C7559.694Cavia_aperea
ENSCING00000021895-9962.898ENSCPOG00000004554POLR2C9562.898Cavia_porcellus
ENSCING00000021895-9962.544ENSCCAG00000035768POLR2C9562.544Cebus_capucinus
ENSCING00000021895-5930.726ENSCCAG00000020169POLR1C5930.726Cebus_capucinus
ENSCING00000021895-6532.143ENSCATG00000044045POLR1C5932.143Cercocebus_atys
ENSCING00000021895-9962.544ENSCATG00000040803POLR2C9562.544Cercocebus_atys
ENSCING00000021895-9962.898ENSCLAG00000013676POLR2C9562.898Chinchilla_lanigera
ENSCING00000021895-9962.544ENSCSAG00000004901POLR2C9562.544Chlorocebus_sabaeus
ENSCING00000021895-9957.597ENSCHOG00000002986POLR2C9457.597Choloepus_hoffmanni
ENSCING00000021895-8963.386ENSCPBG00000022758POLR2C8763.386Chrysemys_picta_bellii
ENSCING00000021895-5487.097ENSCING00000009812-9087.097Ciona_intestinalis
ENSCING00000021895-9982.332ENSCSAVG00000002167-9582.332Ciona_savignyi
ENSCING00000021895-9962.544ENSCANG00000034876POLR2C9562.544Colobus_angolensis_palliatus
ENSCING00000021895-5930.726ENSCANG00000043167POLR1C5930.726Colobus_angolensis_palliatus
ENSCING00000021895-9963.251ENSCGRG00001019477Polr2c9563.251Cricetulus_griseus_chok1gshd
ENSCING00000021895-9963.251ENSCGRG00000013273Polr2c9563.251Cricetulus_griseus_crigri
ENSCING00000021895-9963.251ENSCSEG00000001719polr2c9563.251Cynoglossus_semilaevis
ENSCING00000021895-9963.958ENSCVAG00000004718-9563.958Cyprinodon_variegatus
ENSCING00000021895-7268.293ENSCVAG00000017931polr2c8268.293Cyprinodon_variegatus
ENSCING00000021895-9962.544ENSDARG00000033596polr2c9562.544Danio_rerio
ENSCING00000021895-9963.028ENSDNOG00000030752-7763.028Dasypus_novemcinctus
ENSCING00000021895-9442.279ENSDNOG00000036028-9442.279Dasypus_novemcinctus
ENSCING00000021895-9962.898ENSDORG00000000081Polr2c9562.898Dipodomys_ordii
ENSCING00000021895-9962.676FBgn0026373RpII339562.676Drosophila_melanogaster
ENSCING00000021895-9952.650ENSETEG00000004185POLR2C9552.650Echinops_telfairi
ENSCING00000021895-9958.657ENSEBUG00000016262polr2c9458.657Eptatretus_burgeri
ENSCING00000021895-9962.898ENSEASG00005005406POLR2C9562.898Equus_asinus_asinus
ENSCING00000021895-5930.435ENSECAG00000023516POLR1C5930.435Equus_caballus
ENSCING00000021895-9962.898ENSECAG00000015818POLR2C9562.898Equus_caballus
ENSCING00000021895-9953.004ENSEEUG00000003658POLR2C9553.004Erinaceus_europaeus
ENSCING00000021895-9962.191ENSELUG00000012259polr2c9562.191Esox_lucius
ENSCING00000021895-9962.898ENSFCAG00000034622POLR2C9562.898Felis_catus
ENSCING00000021895-9963.958ENSFALG00000006931POLR2C9563.958Ficedula_albicollis
ENSCING00000021895-9961.131ENSFDAG00000008641POLR2C9461.131Fukomys_damarensis
ENSCING00000021895-9963.958ENSFHEG00000020739polr2c9563.958Fundulus_heteroclitus
ENSCING00000021895-6130.526ENSFHEG00000000262polr1c6030.526Fundulus_heteroclitus
ENSCING00000021895-9962.191ENSGMOG00000004203polr2c9562.191Gadus_morhua
ENSCING00000021895-9964.311ENSGALG00000001168POLR2C9564.311Gallus_gallus
ENSCING00000021895-9963.958ENSGAFG00000021951polr2c9563.958Gambusia_affinis
ENSCING00000021895-9962.544ENSGACG00000002194polr2c9562.544Gasterosteus_aculeatus
ENSCING00000021895-8963.386ENSGAGG00000016942POLR2C8263.386Gopherus_agassizii
ENSCING00000021895-6531.633ENSGGOG00000010903POLR1C5930.726Gorilla_gorilla
ENSCING00000021895-9962.544ENSGGOG00000012415POLR2C9562.544Gorilla_gorilla
ENSCING00000021895-9963.251ENSHBUG00000023040polr2c9563.251Haplochromis_burtoni
ENSCING00000021895-9962.898ENSHGLG00000013465POLR2C9562.898Heterocephalus_glaber_female
ENSCING00000021895-9962.898ENSHGLG00100011949POLR2C9562.898Heterocephalus_glaber_male
ENSCING00000021895-9962.544ENSHCOG00000007066polr2c9562.544Hippocampus_comes
ENSCING00000021895-9962.544ENSIPUG00000009231polr2c9563.604Ictalurus_punctatus
ENSCING00000021895-9953.710ENSSTOG00000031354-9453.710Ictidomys_tridecemlineatus
ENSCING00000021895-9962.898ENSSTOG00000015150-9562.898Ictidomys_tridecemlineatus
ENSCING00000021895-9962.898ENSJJAG00000023057Polr2c9562.898Jaculus_jaculus
ENSCING00000021895-9963.604ENSKMAG00000016196polr2c9563.604Kryptolebias_marmoratus
ENSCING00000021895-9961.837ENSLBEG00000007369polr2c9561.837Labrus_bergylta
ENSCING00000021895-9955.016ENSLACG00000003703POLR2C9555.016Latimeria_chalumnae
ENSCING00000021895-9963.251ENSLOCG00000003215polr2c9563.251Lepisosteus_oculatus
ENSCING00000021895-9962.191ENSLAFG00000027230POLR2C9562.191Loxodonta_africana
ENSCING00000021895-9962.544ENSMFAG00000016861POLR2C9562.544Macaca_fascicularis
ENSCING00000021895-6532.143ENSMFAG00000046295POLR1C5932.143Macaca_fascicularis
ENSCING00000021895-9962.544ENSMMUG00000020474POLR2C9562.544Macaca_mulatta
ENSCING00000021895-6532.143ENSMMUG00000015192POLR1C5932.143Macaca_mulatta
ENSCING00000021895-6532.143ENSMNEG00000028073POLR1C5932.143Macaca_nemestrina
ENSCING00000021895-9962.544ENSMNEG00000033565POLR2C9562.544Macaca_nemestrina
ENSCING00000021895-9962.544ENSMLEG00000032412POLR2C9562.544Mandrillus_leucophaeus
ENSCING00000021895-6532.143ENSMLEG00000034818POLR1C5932.143Mandrillus_leucophaeus
ENSCING00000021895-9963.604ENSMAMG00000013205polr2c9563.604Mastacembelus_armatus
ENSCING00000021895-9963.251ENSMZEG00005015329polr2c9563.251Maylandia_zebra
ENSCING00000021895-9953.004ENSMAUG00000019031-9753.004Mesocricetus_auratus
ENSCING00000021895-9957.244ENSMAUG00000000779-9457.244Mesocricetus_auratus
ENSCING00000021895-9962.191ENSMICG00000045178POLR2C9562.191Microcebus_murinus
ENSCING00000021895-6531.122ENSMICG00000005027POLR1C6231.122Microcebus_murinus
ENSCING00000021895-9961.484ENSMOCG00000013652Polr2c9561.484Microtus_ochrogaster
ENSCING00000021895-9963.251ENSMMOG00000010560polr2c9563.251Mola_mola
ENSCING00000021895-9330.690ENSMODG00000018964POLR1C9530.690Monodelphis_domestica
ENSCING00000021895-9963.604ENSMODG00000013540POLR2C9563.604Monodelphis_domestica
ENSCING00000021895-9963.604ENSMALG00000004581polr2c9563.604Monopterus_albus
ENSCING00000021895-9963.251MGP_CAROLIEiJ_G0031409Polr2c9563.251Mus_caroli
ENSCING00000021895-9963.251ENSMUSG00000031783Polr2c9563.251Mus_musculus
ENSCING00000021895-9963.251MGP_PahariEiJ_G0023007Polr2c9563.251Mus_pahari
ENSCING00000021895-9963.251MGP_SPRETEiJ_G0032528Polr2c9563.251Mus_spretus
ENSCING00000021895-9962.898ENSMPUG00000004483POLR2C9562.898Mustela_putorius_furo
ENSCING00000021895-9962.544ENSMLUG00000015833-9562.544Myotis_lucifugus
ENSCING00000021895-6959.184ENSMLUG00000023530-9059.184Myotis_lucifugus
ENSCING00000021895-9962.544ENSMLUG00000025422-9562.544Myotis_lucifugus
ENSCING00000021895-9961.837ENSMLUG00000029495-9561.837Myotis_lucifugus
ENSCING00000021895-9945.936ENSNGAG00000010540-9345.936Nannospalax_galili
ENSCING00000021895-9962.898ENSNGAG00000012249-9562.898Nannospalax_galili
ENSCING00000021895-5975.000ENSNBRG00000003952polr2c8775.000Neolamprologus_brichardi
ENSCING00000021895-6531.633ENSNLEG00000004035POLR1C5631.633Nomascus_leucogenys
ENSCING00000021895-9950.530ENSNLEG00000003034POLR2C9450.530Nomascus_leucogenys
ENSCING00000021895-5931.844ENSMEUG00000006778POLR1C5031.844Notamacropus_eugenii
ENSCING00000021895-9959.364ENSMEUG00000014741POLR2C9559.364Notamacropus_eugenii
ENSCING00000021895-6530.612ENSOPRG00000000145POLR1C7130.612Ochotona_princeps
ENSCING00000021895-9960.071ENSOPRG00000006979POLR2C9560.071Ochotona_princeps
ENSCING00000021895-9962.898ENSODEG00000016934POLR2C9562.898Octodon_degus
ENSCING00000021895-9963.251ENSONIG00000010914polr2c9563.251Oreochromis_niloticus
ENSCING00000021895-8361.345ENSOANG00000009337POLR2C9361.345Ornithorhynchus_anatinus
ENSCING00000021895-9962.544ENSOCUG00000014984POLR2C9562.544Oryctolagus_cuniculus
ENSCING00000021895-9962.898ENSORLG00000015108polr2c9562.898Oryzias_latipes
ENSCING00000021895-9962.898ENSORLG00020013566polr2c9562.898Oryzias_latipes_hni
ENSCING00000021895-9962.898ENSORLG00015003751polr2c9562.898Oryzias_latipes_hsok
ENSCING00000021895-9963.251ENSOMEG00000019444polr2c9563.251Oryzias_melastigma
ENSCING00000021895-9734.657ENSOGAG00000029610-9434.657Otolemur_garnettii
ENSCING00000021895-9962.191ENSOGAG00000016866POLR2C9562.191Otolemur_garnettii
ENSCING00000021895-9962.898ENSOARG00000000302POLR2C9562.898Ovis_aries
ENSCING00000021895-6531.633ENSPPAG00000043678POLR1C5930.726Pan_paniscus
ENSCING00000021895-9959.011ENSPPAG00000042822POLR2C9559.011Pan_paniscus
ENSCING00000021895-9962.898ENSPPRG00000003215POLR2C9562.898Panthera_pardus
ENSCING00000021895-9558.974ENSPTIG00000010297POLR2C9158.974Panthera_tigris_altaica
ENSCING00000021895-9962.544ENSPTRG00000008157POLR2C9562.544Pan_troglodytes
ENSCING00000021895-6531.633ENSPTRG00000018202POLR1C5930.726Pan_troglodytes
ENSCING00000021895-9962.544ENSPANG00000006264POLR2C9562.544Papio_anubis
ENSCING00000021895-6532.143ENSPANG00000009025POLR1C5932.143Papio_anubis
ENSCING00000021895-9963.604ENSPKIG00000005228polr2c9563.604Paramormyrops_kingsleyae
ENSCING00000021895-8963.386ENSPSIG00000016112POLR2C8563.386Pelodiscus_sinensis
ENSCING00000021895-7266.184ENSPMGG00000021249polr2c8466.184Periophthalmus_magnuspinnatus
ENSCING00000021895-9963.251ENSPEMG00000014204Polr2c9563.251Peromyscus_maniculatus_bairdii
ENSCING00000021895-8864.542ENSPMAG00000004827polr2c10064.542Petromyzon_marinus
ENSCING00000021895-9963.604ENSPCIG00000015111POLR2C9563.604Phascolarctos_cinereus
ENSCING00000021895-9730.132ENSPCIG00000028137POLR1C8230.132Phascolarctos_cinereus
ENSCING00000021895-9963.958ENSPFOG00000024666polr2c9563.958Poecilia_formosa
ENSCING00000021895-9963.958ENSPLAG00000019750polr2c9563.958Poecilia_latipinna
ENSCING00000021895-9963.958ENSPMEG00000001741polr2c9563.958Poecilia_mexicana
ENSCING00000021895-9960.777ENSPREG00000003090polr2c9560.777Poecilia_reticulata
ENSCING00000021895-9962.544ENSPPYG00000007390POLR2C9562.544Pongo_abelii
ENSCING00000021895-8361.181ENSPCAG00000002423POLR2C9361.181Procavia_capensis
ENSCING00000021895-9962.544ENSPCOG00000017282POLR2C9562.544Propithecus_coquereli
ENSCING00000021895-5930.726ENSPCOG00000024628POLR1C5930.726Propithecus_coquereli
ENSCING00000021895-9962.898ENSPVAG00000001399POLR2C9562.898Pteropus_vampyrus
ENSCING00000021895-9963.251ENSPNYG00000003756polr2c9563.251Pundamilia_nyererei
ENSCING00000021895-9964.311ENSPNAG00000012133polr2c9564.311Pygocentrus_nattereri
ENSCING00000021895-9963.251ENSRNOG00000015720Polr2c9563.251Rattus_norvegicus
ENSCING00000021895-9962.544ENSRBIG00000026549POLR2C9562.544Rhinopithecus_bieti
ENSCING00000021895-6531.633ENSRBIG00000007155POLR1C5831.633Rhinopithecus_bieti
ENSCING00000021895-6531.633ENSRROG00000000257POLR1C5930.726Rhinopithecus_roxellana
ENSCING00000021895-9962.544ENSRROG00000045745POLR2C9562.544Rhinopithecus_roxellana
ENSCING00000021895-9739.643YIL021WRPB38039.643Saccharomyces_cerevisiae
ENSCING00000021895-9962.544ENSSBOG00000030004POLR2C9562.544Saimiri_boliviensis_boliviensis
ENSCING00000021895-6532.143ENSSBOG00000025735POLR1C6232.143Saimiri_boliviensis_boliviensis
ENSCING00000021895-8430.303ENSSHAG00000014456POLR1C7430.303Sarcophilus_harrisii
ENSCING00000021895-9963.251ENSSFOG00015023460polr2c9563.251Scleropages_formosus
ENSCING00000021895-9963.251ENSSMAG00000002827polr2c7663.251Scophthalmus_maximus
ENSCING00000021895-9963.958ENSSDUG00000003354polr2c9563.958Seriola_dumerili
ENSCING00000021895-9963.958ENSSLDG00000003555polr2c9563.958Seriola_lalandi_dorsalis
ENSCING00000021895-5549.367ENSSARG00000001565-10049.367Sorex_araneus
ENSCING00000021895-9963.604ENSSPUG00000012934POLR2C9563.604Sphenodon_punctatus
ENSCING00000021895-9963.251ENSSPAG00000005108polr2c9563.251Stegastes_partitus
ENSCING00000021895-9962.898ENSSSCG00000025454POLR2C9562.898Sus_scrofa
ENSCING00000021895-9963.958ENSTGUG00000004996POLR2C9563.958Taeniopygia_guttata
ENSCING00000021895-9965.371ENSTRUG00000004676polr2c9565.371Takifugu_rubripes
ENSCING00000021895-9964.664ENSTNIG00000008851polr2c9564.664Tetraodon_nigroviridis
ENSCING00000021895-9961.837ENSTBEG00000009442POLR2C9561.837Tupaia_belangeri
ENSCING00000021895-8361.181ENSTTRG00000010060POLR2C9361.181Tursiops_truncatus
ENSCING00000021895-9962.898ENSUAMG00000014170POLR2C9562.898Ursus_americanus
ENSCING00000021895-9061.240ENSUMAG00000021686POLR2C9061.240Ursus_maritimus
ENSCING00000021895-7255.340ENSVPAG00000007590POLR2C10055.340Vicugna_pacos
ENSCING00000021895-9960.071ENSVVUG00000023516-9460.071Vulpes_vulpes
ENSCING00000021895-6530.612ENSVVUG00000028922POLR1C5931.285Vulpes_vulpes
ENSCING00000021895-5757.317ENSVVUG00000003058-9357.317Vulpes_vulpes
ENSCING00000021895-9956.338ENSXETG00000013784polr2c9556.338Xenopus_tropicalis
ENSCING00000021895-9963.958ENSXCOG00000020734polr2c9563.958Xiphophorus_couchianus
ENSCING00000021895-9963.958ENSXMAG00000015984polr2c9563.958Xiphophorus_maculatus

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