EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000022142 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 5756 bases
Position: chr1:8887650-8893405
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000031560	FDF	PF09532.10	3.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000032166	-	2085	-	ENSCINP00000031560	504 (aa)	-	H2XPH6

Gene Model

Click here to download ENSCING00000022142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000022142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000022142	-	99	38.462	ENSG00000179151	EDC3	95	47.531	Homo_sapiens
ENSCING00000022142	-	99	39.293	ENSAPOG00000010791	edc3	100	39.293	Acanthochromis_polyacanthus
ENSCING00000022142	-	99	33.789	ENSAPOG00000008655	EDC3	99	34.375	Acanthochromis_polyacanthus
ENSCING00000022142	-	99	37.500	ENSAMEG00000008963	EDC3	100	37.500	Ailuropoda_melanoleuca
ENSCING00000022142	-	99	35.977	ENSACIG00000005330	EDC3	99	35.922	Amphilophus_citrinellus
ENSCING00000022142	-	99	38.386	ENSACIG00000017751	edc3	100	38.386	Amphilophus_citrinellus
ENSCING00000022142	-	99	35.714	ENSAOCG00000009103	-	99	36.310	Amphiprion_ocellaris
ENSCING00000022142	-	99	39.096	ENSAOCG00000005431	edc3	100	39.096	Amphiprion_ocellaris
ENSCING00000022142	-	99	35.714	ENSAPEG00000007841	EDC3	99	36.310	Amphiprion_percula
ENSCING00000022142	-	99	39.096	ENSAPEG00000000968	edc3	100	39.096	Amphiprion_percula
ENSCING00000022142	-	99	36.706	ENSATEG00000004205	-	99	36.706	Anabas_testudineus
ENSCING00000022142	-	99	39.020	ENSATEG00000015505	edc3	100	39.020	Anabas_testudineus
ENSCING00000022142	-	70	45.378	ENSAPLG00000008957	EDC3	77	45.378	Anas_platyrhynchos
ENSCING00000022142	-	78	34.772	ENSACAG00000000460	-	100	34.772	Anolis_carolinensis
ENSCING00000022142	-	99	38.654	ENSANAG00000024078	EDC3	100	38.654	Aotus_nancymaae
ENSCING00000022142	-	99	38.431	ENSACLG00000007232	edc3	100	38.431	Astatotilapia_calliptera
ENSCING00000022142	-	99	35.842	ENSACLG00000018776	-	99	35.842	Astatotilapia_calliptera
ENSCING00000022142	-	99	37.525	ENSAMXG00000001589	edc3	100	37.378	Astyanax_mexicanus
ENSCING00000022142	-	99	38.077	ENSBTAG00000007308	EDC3	100	38.077	Bos_taurus
ENSCING00000022142	-	99	38.462	ENSCJAG00000017681	EDC3	100	38.462	Callithrix_jacchus
ENSCING00000022142	-	99	37.885	ENSCAFG00000017935	EDC3	100	37.885	Canis_familiaris
ENSCING00000022142	-	99	37.885	ENSCAFG00020003909	EDC3	100	37.885	Canis_lupus_dingo
ENSCING00000022142	-	99	38.077	ENSCHIG00000023658	EDC3	100	38.077	Capra_hircus
ENSCING00000022142	-	99	38.077	ENSTSYG00000004822	EDC3	100	38.077	Carlito_syrichta
ENSCING00000022142	-	99	38.077	ENSCPOG00000015595	EDC3	100	38.077	Cavia_porcellus
ENSCING00000022142	-	99	38.654	ENSCCAG00000021663	EDC3	100	38.654	Cebus_capucinus
ENSCING00000022142	-	99	38.654	ENSCATG00000037511	EDC3	100	38.654	Cercocebus_atys
ENSCING00000022142	-	99	38.269	ENSCLAG00000005700	EDC3	100	38.269	Chinchilla_lanigera
ENSCING00000022142	-	99	38.654	ENSCSAG00000014239	EDC3	100	38.654	Chlorocebus_sabaeus
ENSCING00000022142	-	99	38.372	ENSCPBG00000024239	EDC3	100	38.224	Chrysemys_picta_bellii
ENSCING00000022142	-	99	38.654	ENSCANG00000028699	EDC3	100	38.654	Colobus_angolensis_palliatus
ENSCING00000022142	-	99	38.462	ENSCGRG00001013874	Edc3	100	38.462	Cricetulus_griseus_chok1gshd
ENSCING00000022142	-	99	38.462	ENSCGRG00000011885	Edc3	100	38.462	Cricetulus_griseus_crigri
ENSCING00000022142	-	99	39.448	ENSCSEG00000012996	edc3	99	39.448	Cynoglossus_semilaevis
ENSCING00000022142	-	99	38.310	ENSCVAG00000008023	edc3	100	38.310	Cyprinodon_variegatus
ENSCING00000022142	-	99	39.197	ENSDARG00000051931	edc3	99	39.197	Danio_rerio
ENSCING00000022142	-	99	34.915	ENSDNOG00000030661	EDC3	100	34.915	Dasypus_novemcinctus
ENSCING00000022142	-	51	45.045	ENSETEG00000002398	-	50	45.045	Echinops_telfairi
ENSCING00000022142	-	99	37.885	ENSEASG00005005071	EDC3	100	37.885	Equus_asinus_asinus
ENSCING00000022142	-	99	37.885	ENSECAG00000017994	EDC3	100	37.885	Equus_caballus
ENSCING00000022142	-	99	36.914	ENSELUG00000005794	edc3	100	37.500	Esox_lucius
ENSCING00000022142	-	99	37.791	ENSELUG00000007607	EDC3	100	37.791	Esox_lucius
ENSCING00000022142	-	99	38.390	ENSFCAG00000002014	EDC3	100	38.390	Felis_catus
ENSCING00000022142	-	96	38.048	ENSFALG00000004543	EDC3	94	38.048	Ficedula_albicollis
ENSCING00000022142	-	99	38.889	ENSFDAG00000012582	EDC3	100	38.889	Fukomys_damarensis
ENSCING00000022142	-	99	38.114	ENSFHEG00000009375	edc3	100	38.114	Fundulus_heteroclitus
ENSCING00000022142	-	99	39.575	ENSGMOG00000002715	edc3	100	39.922	Gadus_morhua
ENSCING00000022142	-	99	38.224	ENSGALG00000040181	EDC3	100	38.077	Gallus_gallus
ENSCING00000022142	-	99	37.598	ENSGAFG00000014433	edc3	100	37.402	Gambusia_affinis
ENSCING00000022142	-	99	33.716	ENSGACG00000014671	EDC3	99	33.908	Gasterosteus_aculeatus
ENSCING00000022142	-	99	37.255	ENSGACG00000009783	edc3	99	37.255	Gasterosteus_aculeatus
ENSCING00000022142	-	99	38.760	ENSGAGG00000023477	EDC3	99	38.760	Gopherus_agassizii
ENSCING00000022142	-	99	38.462	ENSGGOG00000003552	EDC3	100	38.462	Gorilla_gorilla
ENSCING00000022142	-	99	38.431	ENSHBUG00000003635	edc3	100	38.431	Haplochromis_burtoni
ENSCING00000022142	-	99	35.586	ENSHBUG00000020817	EDC3	99	35.586	Haplochromis_burtoni
ENSCING00000022142	-	99	37.427	ENSHCOG00000016834	edc3	100	37.427	Hippocampus_comes
ENSCING00000022142	-	99	39.499	ENSIPUG00000005695	edc3	99	39.499	Ictalurus_punctatus
ENSCING00000022142	-	99	38.196	ENSSTOG00000013936	EDC3	100	38.196	Ictidomys_tridecemlineatus
ENSCING00000022142	-	99	38.462	ENSJJAG00000008074	Edc3	100	38.462	Jaculus_jaculus
ENSCING00000022142	-	99	35.714	ENSKMAG00000001987	EDC3	99	35.714	Kryptolebias_marmoratus
ENSCING00000022142	-	99	37.205	ENSKMAG00000001243	edc3	100	38.114	Kryptolebias_marmoratus
ENSCING00000022142	-	100	38.235	ENSLBEG00000013435	edc3	99	38.507	Labrus_bergylta
ENSCING00000022142	-	99	36.417	ENSLBEG00000017984	EDC3	100	36.417	Labrus_bergylta
ENSCING00000022142	-	99	38.462	ENSLACG00000014149	EDC3	100	38.462	Latimeria_chalumnae
ENSCING00000022142	-	99	34.623	ENSLOCG00000014625	edc3	100	34.100	Lepisosteus_oculatus
ENSCING00000022142	-	99	38.269	ENSLAFG00000002992	EDC3	100	38.269	Loxodonta_africana
ENSCING00000022142	-	99	38.462	ENSMFAG00000043074	EDC3	100	38.462	Macaca_fascicularis
ENSCING00000022142	-	99	38.462	ENSMMUG00000011071	EDC3	100	38.462	Macaca_mulatta
ENSCING00000022142	-	99	38.462	ENSMNEG00000035316	EDC3	100	38.462	Macaca_nemestrina
ENSCING00000022142	-	99	38.654	ENSMLEG00000030372	EDC3	100	38.654	Mandrillus_leucophaeus
ENSCING00000022142	-	99	35.446	ENSMAMG00000005423	-	99	35.446	Mastacembelus_armatus
ENSCING00000022142	-	99	38.703	ENSMAMG00000000505	edc3	100	38.507	Mastacembelus_armatus
ENSCING00000022142	-	99	36.149	ENSMZEG00005005654	EDC3	99	36.149	Maylandia_zebra
ENSCING00000022142	-	99	38.431	ENSMZEG00005004892	edc3	100	38.431	Maylandia_zebra
ENSCING00000022142	-	99	37.984	ENSMGAG00000002617	EDC3	100	37.838	Meleagris_gallopavo
ENSCING00000022142	-	99	38.417	ENSMICG00000043190	EDC3	100	38.417	Microcebus_murinus
ENSCING00000022142	-	99	38.077	ENSMOCG00000016205	Edc3	100	38.077	Microtus_ochrogaster
ENSCING00000022142	-	99	39.250	ENSMMOG00000012278	edc3	99	39.250	Mola_mola
ENSCING00000022142	-	99	38.803	ENSMODG00000009442	EDC3	100	38.654	Monodelphis_domestica
ENSCING00000022142	-	99	38.507	ENSMALG00000008658	edc3	100	38.507	Monopterus_albus
ENSCING00000022142	-	99	37.885	MGP_CAROLIEiJ_G0032280	Edc3	100	38.077	Mus_caroli
ENSCING00000022142	-	99	38.077	ENSMUSG00000038957	Edc3	100	38.269	Mus_musculus
ENSCING00000022142	-	99	37.885	MGP_PahariEiJ_G0015146	Edc3	100	38.077	Mus_pahari
ENSCING00000022142	-	99	37.885	MGP_SPRETEiJ_G0033420	Edc3	100	38.077	Mus_spretus
ENSCING00000022142	-	99	37.828	ENSMPUG00000017293	EDC3	100	37.828	Mustela_putorius_furo
ENSCING00000022142	-	99	37.899	ENSMLUG00000016382	EDC3	100	37.899	Myotis_lucifugus
ENSCING00000022142	-	99	38.077	ENSNGAG00000010923	Edc3	100	38.077	Nannospalax_galili
ENSCING00000022142	-	99	36.117	ENSNBRG00000007881	EDC3	99	36.117	Neolamprologus_brichardi
ENSCING00000022142	-	99	38.780	ENSNBRG00000002434	edc3	100	38.780	Neolamprologus_brichardi
ENSCING00000022142	-	99	33.719	ENSNLEG00000014577	EDC3	100	33.719	Nomascus_leucogenys
ENSCING00000022142	-	99	37.689	ENSMEUG00000009077	EDC3	99	37.689	Notamacropus_eugenii
ENSCING00000022142	-	66	38.393	ENSOPRG00000009540	-	65	38.393	Ochotona_princeps
ENSCING00000022142	-	99	35.606	ENSONIG00000002932	-	99	35.606	Oreochromis_niloticus
ENSCING00000022142	-	99	38.477	ENSONIG00000008434	edc3	100	38.477	Oreochromis_niloticus
ENSCING00000022142	-	78	35.154	ENSOCUG00000017740	EDC3	86	35.154	Oryctolagus_cuniculus
ENSCING00000022142	-	99	38.114	ENSORLG00000004883	edc3	100	38.114	Oryzias_latipes
ENSCING00000022142	-	99	36.454	ENSORLG00000014399	-	98	36.454	Oryzias_latipes
ENSCING00000022142	-	99	37.721	ENSORLG00020012262	edc3	100	37.721	Oryzias_latipes_hni
ENSCING00000022142	-	99	36.056	ENSORLG00020019446	-	99	36.056	Oryzias_latipes_hni
ENSCING00000022142	-	99	37.965	ENSORLG00015005634	edc3	100	37.965	Oryzias_latipes_hsok
ENSCING00000022142	-	99	36.255	ENSORLG00015017635	-	95	36.255	Oryzias_latipes_hsok
ENSCING00000022142	-	99	36.508	ENSOMEG00000017354	EDC3	99	36.508	Oryzias_melastigma
ENSCING00000022142	-	99	38.431	ENSOMEG00000014026	edc3	100	38.431	Oryzias_melastigma
ENSCING00000022142	-	99	38.077	ENSOGAG00000014441	EDC3	100	38.269	Otolemur_garnettii
ENSCING00000022142	-	99	37.838	ENSOARG00000003476	EDC3	100	38.314	Ovis_aries
ENSCING00000022142	-	99	38.462	ENSPPAG00000040143	EDC3	100	38.462	Pan_paniscus
ENSCING00000022142	-	99	37.885	ENSPPRG00000006257	EDC3	100	37.885	Panthera_pardus
ENSCING00000022142	-	99	37.885	ENSPTIG00000017424	EDC3	100	37.885	Panthera_tigris_altaica
ENSCING00000022142	-	99	38.462	ENSPTRG00000007279	EDC3	100	38.462	Pan_troglodytes
ENSCING00000022142	-	99	38.654	ENSPANG00000015997	EDC3	100	38.654	Papio_anubis
ENSCING00000022142	-	99	34.981	ENSPKIG00000004416	edc3	100	35.350	Paramormyrops_kingsleyae
ENSCING00000022142	-	95	37.626	ENSPKIG00000019810	EDC3	98	38.289	Paramormyrops_kingsleyae
ENSCING00000022142	-	90	37.422	ENSPSIG00000008474	EDC3	100	36.347	Pelodiscus_sinensis
ENSCING00000022142	-	99	38.281	ENSPMGG00000007223	edc3	99	38.281	Periophthalmus_magnuspinnatus
ENSCING00000022142	-	99	37.958	ENSPEMG00000015260	Edc3	100	37.958	Peromyscus_maniculatus_bairdii
ENSCING00000022142	-	99	37.879	ENSPCIG00000006276	EDC3	70	37.879	Phascolarctos_cinereus
ENSCING00000022142	-	99	37.598	ENSPFOG00000012204	edc3	100	37.598	Poecilia_formosa
ENSCING00000022142	-	99	37.598	ENSPLAG00000014420	edc3	100	37.598	Poecilia_latipinna
ENSCING00000022142	-	99	37.598	ENSPMEG00000023289	edc3	100	37.598	Poecilia_mexicana
ENSCING00000022142	-	99	37.598	ENSPREG00000016022	edc3	100	37.598	Poecilia_reticulata
ENSCING00000022142	-	99	37.885	ENSPPYG00000006642	EDC3	100	37.885	Pongo_abelii
ENSCING00000022142	-	66	47.181	ENSPCAG00000002802	EDC3	65	47.181	Procavia_capensis
ENSCING00000022142	-	99	37.692	ENSPCOG00000013364	EDC3	100	37.692	Propithecus_coquereli
ENSCING00000022142	-	99	37.885	ENSPVAG00000014733	EDC3	100	37.885	Pteropus_vampyrus
ENSCING00000022142	-	99	38.431	ENSPNYG00000021797	edc3	100	38.431	Pundamilia_nyererei
ENSCING00000022142	-	99	35.586	ENSPNYG00000009669	EDC3	99	35.586	Pundamilia_nyererei
ENSCING00000022142	-	99	39.223	ENSPNAG00000019657	edc3	100	39.223	Pygocentrus_nattereri
ENSCING00000022142	-	99	37.037	ENSRNOG00000019579	Edc3	99	37.984	Rattus_norvegicus
ENSCING00000022142	-	99	39.080	ENSRBIG00000019488	EDC3	100	39.080	Rhinopithecus_bieti
ENSCING00000022142	-	99	39.080	ENSRROG00000034959	EDC3	100	39.080	Rhinopithecus_roxellana
ENSCING00000022142	-	99	38.654	ENSSBOG00000004896	EDC3	100	38.654	Saimiri_boliviensis_boliviensis
ENSCING00000022142	-	96	37.109	ENSSHAG00000015075	EDC3	95	37.109	Sarcophilus_harrisii
ENSCING00000022142	-	99	36.224	ENSSFOG00015002439	edc3	100	36.346	Scleropages_formosus
ENSCING00000022142	-	99	36.873	ENSSFOG00015016939	edc3	99	36.944	Scleropages_formosus
ENSCING00000022142	-	99	38.900	ENSSMAG00000010695	edc3	100	38.900	Scophthalmus_maximus
ENSCING00000022142	-	99	36.346	ENSSMAG00000010176	-	99	36.346	Scophthalmus_maximus
ENSCING00000022142	-	99	36.346	ENSSDUG00000007671	EDC3	100	36.346	Seriola_dumerili
ENSCING00000022142	-	99	39.412	ENSSDUG00000021844	edc3	100	39.489	Seriola_dumerili
ENSCING00000022142	-	99	39.293	ENSSLDG00000022046	edc3	100	39.370	Seriola_lalandi_dorsalis
ENSCING00000022142	-	65	47.083	ENSSARG00000003907	EDC3	65	47.083	Sorex_araneus
ENSCING00000022142	-	99	37.958	ENSSPUG00000008232	EDC3	100	37.958	Sphenodon_punctatus
ENSCING00000022142	-	99	39.489	ENSSPAG00000010009	edc3	100	39.489	Stegastes_partitus
ENSCING00000022142	-	99	35.913	ENSSPAG00000020327	EDC3	99	35.913	Stegastes_partitus
ENSCING00000022142	-	99	37.795	ENSSSCG00000001903	EDC3	100	37.795	Sus_scrofa
ENSCING00000022142	-	99	37.670	ENSTGUG00000004007	EDC3	100	37.524	Taeniopygia_guttata
ENSCING00000022142	-	99	38.703	ENSTRUG00000017078	edc3	100	38.703	Takifugu_rubripes
ENSCING00000022142	-	99	39.216	ENSTNIG00000016047	edc3	100	39.216	Tetraodon_nigroviridis
ENSCING00000022142	-	99	38.004	ENSTTRG00000007990	EDC3	100	38.004	Tursiops_truncatus
ENSCING00000022142	-	99	37.500	ENSUAMG00000026710	-	100	37.500	Ursus_americanus
ENSCING00000022142	-	99	37.500	ENSUMAG00000005006	EDC3	96	37.500	Ursus_maritimus
ENSCING00000022142	-	66	39.169	ENSVPAG00000003499	-	65	39.169	Vicugna_pacos
ENSCING00000022142	-	99	38.077	ENSVVUG00000018601	EDC3	100	38.077	Vulpes_vulpes
ENSCING00000022142	-	64	45.370	ENSXETG00000010622	edc3	92	45.706	Xenopus_tropicalis
ENSCING00000022142	-	99	37.992	ENSXMAG00000007377	edc3	100	37.992	Xiphophorus_maculatus