EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000022202 (Gene tree)
Gene ID: 100184403
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1369 bases
Position: chr10:3713773-3715141
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000020009	EMG1	PF03587.14	5.8e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000020009	-	984	-	ENSCINP00000020009	237 (aa)	-	F6RAN6

Gene Model

Click here to download ENSCING00000022202's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000022202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000022202	-	89	74.762	ENSG00000126749	EMG1	86	74.762	Homo_sapiens
ENSCING00000022202	-	100	65.823	ENSAPOG00000023213	emg1	99	65.823	Acanthochromis_polyacanthus
ENSCING00000022202	-	100	67.647	ENSAMEG00000013753	EMG1	97	67.647	Ailuropoda_melanoleuca
ENSCING00000022202	-	98	67.382	ENSACIG00000011786	emg1	97	67.382	Amphilophus_citrinellus
ENSCING00000022202	-	100	66.667	ENSAOCG00000006520	emg1	96	66.667	Amphiprion_ocellaris
ENSCING00000022202	-	100	66.667	ENSAPEG00000011094	emg1	96	66.667	Amphiprion_percula
ENSCING00000022202	-	98	67.811	ENSATEG00000021642	emg1	97	67.811	Anabas_testudineus
ENSCING00000022202	-	80	68.947	ENSAPLG00000005308	EMG1	100	68.947	Anas_platyrhynchos
ENSCING00000022202	-	86	71.707	ENSACAG00000007210	EMG1	89	71.707	Anolis_carolinensis
ENSCING00000022202	-	89	73.934	ENSANAG00000022855	-	86	73.934	Aotus_nancymaae
ENSCING00000022202	-	89	67.143	ENSANAG00000029536	-	85	67.143	Aotus_nancymaae
ENSCING00000022202	-	98	68.670	ENSACLG00000023688	emg1	97	68.670	Astatotilapia_calliptera
ENSCING00000022202	-	99	65.957	ENSAMXG00000018994	emg1	98	65.957	Astyanax_mexicanus
ENSCING00000022202	-	100	67.647	ENSBTAG00000013126	EMG1	68	67.647	Bos_taurus
ENSCING00000022202	-	92	51.598	WBGene00012652	Y39A1A.14	94	51.598	Caenorhabditis_elegans
ENSCING00000022202	-	89	73.810	ENSCJAG00000007120	EMG1	86	73.810	Callithrix_jacchus
ENSCING00000022202	-	100	68.067	ENSCAFG00000014424	EMG1	97	68.067	Canis_familiaris
ENSCING00000022202	-	100	68.067	ENSCAFG00020003127	EMG1	97	68.067	Canis_lupus_dingo
ENSCING00000022202	-	100	68.067	ENSCHIG00000003188	EMG1	97	68.067	Capra_hircus
ENSCING00000022202	-	64	76.316	ENSTSYG00000035847	EMG1	100	76.316	Carlito_syrichta
ENSCING00000022202	-	64	76.316	ENSCAPG00000011212	EMG1	100	76.316	Cavia_aperea
ENSCING00000022202	-	100	68.487	ENSCPOG00000025388	EMG1	97	68.487	Cavia_porcellus
ENSCING00000022202	-	89	74.286	ENSCCAG00000033309	-	86	74.286	Cebus_capucinus
ENSCING00000022202	-	64	51.634	ENSCCAG00000024274	-	100	51.634	Cebus_capucinus
ENSCING00000022202	-	62	57.432	ENSCCAG00000034889	-	85	57.432	Cebus_capucinus
ENSCING00000022202	-	89	74.286	ENSCATG00000016750	EMG1	86	74.286	Cercocebus_atys
ENSCING00000022202	-	100	69.328	ENSCLAG00000015067	EMG1	97	69.328	Chinchilla_lanigera
ENSCING00000022202	-	89	74.286	ENSCSAG00000010140	EMG1	86	74.286	Chlorocebus_sabaeus
ENSCING00000022202	-	99	67.511	ENSCHOG00000002886	EMG1	97	67.511	Choloepus_hoffmanni
ENSCING00000022202	-	72	71.765	ENSCPBG00000005167	EMG1	58	71.765	Chrysemys_picta_bellii
ENSCING00000022202	-	100	87.342	ENSCSAVG00000005612	-	100	87.342	Ciona_savignyi
ENSCING00000022202	-	89	74.286	ENSCANG00000043101	-	86	74.286	Colobus_angolensis_palliatus
ENSCING00000022202	-	89	64.762	ENSCANG00000042498	-	100	70.714	Colobus_angolensis_palliatus
ENSCING00000022202	-	88	75.598	ENSCGRG00001018228	Emg1	85	75.598	Cricetulus_griseus_chok1gshd
ENSCING00000022202	-	88	75.598	ENSCGRG00000018238	Emg1	85	75.598	Cricetulus_griseus_crigri
ENSCING00000022202	-	98	67.797	ENSCSEG00000020136	emg1	97	67.797	Cynoglossus_semilaevis
ENSCING00000022202	-	98	66.524	ENSCVAG00000001164	emg1	98	66.524	Cyprinodon_variegatus
ENSCING00000022202	-	99	66.809	ENSDARG00000056914	emg1	98	66.809	Danio_rerio
ENSCING00000022202	-	88	75.120	ENSDNOG00000005533	EMG1	97	68.487	Dasypus_novemcinctus
ENSCING00000022202	-	84	71.859	ENSDORG00000009795	Emg1	85	71.859	Dipodomys_ordii
ENSCING00000022202	-	99	57.551	FBgn0029714	CG3527	97	57.551	Drosophila_melanogaster
ENSCING00000022202	-	65	51.634	ENSETEG00000009111	-	99	51.634	Echinops_telfairi
ENSCING00000022202	-	88	64.115	ENSEBUG00000008287	emg1	82	64.115	Eptatretus_burgeri
ENSCING00000022202	-	100	68.067	ENSEASG00005016018	EMG1	97	68.067	Equus_asinus_asinus
ENSCING00000022202	-	100	67.647	ENSECAG00000022412	EMG1	97	67.647	Equus_caballus
ENSCING00000022202	-	87	74.757	ENSEEUG00000000065	EMG1	84	74.757	Erinaceus_europaeus
ENSCING00000022202	-	100	68.487	ENSFCAG00000004288	EMG1	97	68.487	Felis_catus
ENSCING00000022202	-	86	73.171	ENSFALG00000004617	EMG1	94	68.261	Ficedula_albicollis
ENSCING00000022202	-	100	68.908	ENSFDAG00000011086	EMG1	97	68.908	Fukomys_damarensis
ENSCING00000022202	-	56	66.165	ENSFHEG00000014379	emg1	59	66.165	Fundulus_heteroclitus
ENSCING00000022202	-	54	56.250	ENSFHEG00000014307	emg1	81	56.250	Fundulus_heteroclitus
ENSCING00000022202	-	98	65.236	ENSGMOG00000011025	emg1	95	65.236	Gadus_morhua
ENSCING00000022202	-	99	65.385	ENSGALG00000014568	EMG1	99	65.385	Gallus_gallus
ENSCING00000022202	-	98	66.524	ENSGAFG00000014143	emg1	98	66.524	Gambusia_affinis
ENSCING00000022202	-	98	66.239	ENSGACG00000010330	emg1	95	66.239	Gasterosteus_aculeatus
ENSCING00000022202	-	80	71.579	ENSGAGG00000005641	EMG1	100	71.711	Gopherus_agassizii
ENSCING00000022202	-	89	73.810	ENSGGOG00000004287	EMG1	86	73.810	Gorilla_gorilla
ENSCING00000022202	-	98	68.670	ENSHBUG00000014862	emg1	97	68.670	Haplochromis_burtoni
ENSCING00000022202	-	100	66.667	ENSHGLG00000001300	EMG1	97	66.667	Heterocephalus_glaber_female
ENSCING00000022202	-	100	66.667	ENSHGLG00100011644	EMG1	97	66.667	Heterocephalus_glaber_male
ENSCING00000022202	-	98	66.953	ENSHCOG00000017870	emg1	97	66.953	Hippocampus_comes
ENSCING00000022202	-	98	66.524	ENSIPUG00000008261	emg1	97	66.524	Ictalurus_punctatus
ENSCING00000022202	-	88	75.598	ENSSTOG00000000387	EMG1	85	75.598	Ictidomys_tridecemlineatus
ENSCING00000022202	-	88	73.206	ENSJJAG00000018448	Emg1	85	73.206	Jaculus_jaculus
ENSCING00000022202	-	98	66.953	ENSKMAG00000007069	emg1	97	66.953	Kryptolebias_marmoratus
ENSCING00000022202	-	98	68.670	ENSLBEG00000007424	emg1	97	68.670	Labrus_bergylta
ENSCING00000022202	-	98	64.957	ENSLOCG00000008451	emg1	95	64.957	Lepisosteus_oculatus
ENSCING00000022202	-	87	75.243	ENSLAFG00000001314	EMG1	84	75.243	Loxodonta_africana
ENSCING00000022202	-	89	74.286	ENSMFAG00000037142	EMG1	86	74.286	Macaca_fascicularis
ENSCING00000022202	-	89	74.286	ENSMMUG00000010207	EMG1	86	74.286	Macaca_mulatta
ENSCING00000022202	-	89	74.286	ENSMNEG00000040907	EMG1	86	74.286	Macaca_nemestrina
ENSCING00000022202	-	89	74.286	ENSMLEG00000026029	EMG1	86	74.286	Mandrillus_leucophaeus
ENSCING00000022202	-	98	68.240	ENSMAMG00000001888	emg1	97	68.240	Mastacembelus_armatus
ENSCING00000022202	-	98	68.670	ENSMZEG00005017546	emg1	97	68.670	Maylandia_zebra
ENSCING00000022202	-	86	71.220	ENSMGAG00000014145	EMG1	94	65.236	Meleagris_gallopavo
ENSCING00000022202	-	100	68.067	ENSMAUG00000011093	Emg1	97	68.067	Mesocricetus_auratus
ENSCING00000022202	-	100	68.067	ENSMICG00000001790	EMG1	97	68.067	Microcebus_murinus
ENSCING00000022202	-	100	67.227	ENSMOCG00000022570	Emg1	97	67.227	Microtus_ochrogaster
ENSCING00000022202	-	98	66.953	ENSMMOG00000016090	emg1	97	66.953	Mola_mola
ENSCING00000022202	-	88	74.641	ENSMODG00000018161	EMG1	95	67.647	Monodelphis_domestica
ENSCING00000022202	-	98	67.382	ENSMALG00000022477	emg1	97	67.382	Monopterus_albus
ENSCING00000022202	-	87	74.757	MGP_CAROLIEiJ_G0028844	Emg1	84	74.757	Mus_caroli
ENSCING00000022202	-	100	67.647	ENSMUSG00000004268	Emg1	97	67.647	Mus_musculus
ENSCING00000022202	-	87	74.757	MGP_PahariEiJ_G0022605	Emg1	84	74.757	Mus_pahari
ENSCING00000022202	-	87	75.243	MGP_SPRETEiJ_G0029886	Emg1	84	75.243	Mus_spretus
ENSCING00000022202	-	100	68.067	ENSMPUG00000016763	EMG1	97	68.067	Mustela_putorius_furo
ENSCING00000022202	-	87	73.558	ENSMLUG00000009196	EMG1	84	73.558	Myotis_lucifugus
ENSCING00000022202	-	88	74.163	ENSNGAG00000022592	Emg1	87	74.163	Nannospalax_galili
ENSCING00000022202	-	98	68.670	ENSNBRG00000001192	emg1	97	68.670	Neolamprologus_brichardi
ENSCING00000022202	-	89	74.286	ENSNLEG00000005080	EMG1	86	74.286	Nomascus_leucogenys
ENSCING00000022202	-	93	66.818	ENSMEUG00000000831	EMG1	97	66.818	Notamacropus_eugenii
ENSCING00000022202	-	80	75.132	ENSOPRG00000016878	-	100	75.132	Ochotona_princeps
ENSCING00000022202	-	100	67.932	ENSODEG00000004059	EMG1	97	67.932	Octodon_degus
ENSCING00000022202	-	98	68.240	ENSONIG00000012893	emg1	97	68.240	Oreochromis_niloticus
ENSCING00000022202	-	100	68.067	ENSOCUG00000003603	EMG1	97	68.067	Oryctolagus_cuniculus
ENSCING00000022202	-	99	67.373	ENSORLG00000012146	emg1	95	67.373	Oryzias_latipes
ENSCING00000022202	-	99	67.373	ENSORLG00020005499	emg1	98	67.373	Oryzias_latipes_hni
ENSCING00000022202	-	99	67.373	ENSORLG00015011535	emg1	98	67.373	Oryzias_latipes_hsok
ENSCING00000022202	-	99	67.797	ENSOMEG00000012687	emg1	98	67.797	Oryzias_melastigma
ENSCING00000022202	-	88	74.163	ENSOGAG00000006975	EMG1	85	74.163	Otolemur_garnettii
ENSCING00000022202	-	100	67.500	ENSOARG00000004923	EMG1	97	67.500	Ovis_aries
ENSCING00000022202	-	89	74.762	ENSPPAG00000033046	EMG1	86	74.762	Pan_paniscus
ENSCING00000022202	-	100	68.487	ENSPPRG00000012350	EMG1	97	68.487	Panthera_pardus
ENSCING00000022202	-	100	68.487	ENSPTIG00000000358	EMG1	97	68.487	Panthera_tigris_altaica
ENSCING00000022202	-	89	74.762	ENSPTRG00000048050	EMG1	86	74.762	Pan_troglodytes
ENSCING00000022202	-	89	74.762	ENSPANG00000005523	-	86	74.762	Papio_anubis
ENSCING00000022202	-	89	74.286	ENSPANG00000019398	-	86	74.286	Papio_anubis
ENSCING00000022202	-	99	65.678	ENSPKIG00000025303	emg1	98	65.678	Paramormyrops_kingsleyae
ENSCING00000022202	-	88	68.900	ENSPSIG00000011094	EMG1	90	68.900	Pelodiscus_sinensis
ENSCING00000022202	-	98	69.099	ENSPMGG00000019918	emg1	97	69.099	Periophthalmus_magnuspinnatus
ENSCING00000022202	-	100	68.067	ENSPEMG00000010244	Emg1	97	68.067	Peromyscus_maniculatus_bairdii
ENSCING00000022202	-	89	74.286	ENSPCIG00000002814	EMG1	95	68.376	Phascolarctos_cinereus
ENSCING00000022202	-	98	65.665	ENSPFOG00000013034	emg1	98	65.665	Poecilia_formosa
ENSCING00000022202	-	98	65.665	ENSPLAG00000000125	emg1	98	65.665	Poecilia_latipinna
ENSCING00000022202	-	98	66.094	ENSPMEG00000016802	emg1	98	66.094	Poecilia_mexicana
ENSCING00000022202	-	98	65.236	ENSPREG00000010409	emg1	80	65.236	Poecilia_reticulata
ENSCING00000022202	-	89	74.762	ENSPPYG00000004215	EMG1	86	74.762	Pongo_abelii
ENSCING00000022202	-	88	62.201	ENSPCAG00000012368	EMG1	83	62.201	Procavia_capensis
ENSCING00000022202	-	100	68.067	ENSPCOG00000028560	EMG1	97	68.067	Propithecus_coquereli
ENSCING00000022202	-	88	74.163	ENSPVAG00000006030	EMG1	85	74.163	Pteropus_vampyrus
ENSCING00000022202	-	98	68.670	ENSPNYG00000023172	emg1	97	68.670	Pundamilia_nyererei
ENSCING00000022202	-	99	65.106	ENSPNAG00000019953	emg1	98	65.106	Pygocentrus_nattereri
ENSCING00000022202	-	87	75.728	ENSRNOG00000012828	Emg1	84	75.728	Rattus_norvegicus
ENSCING00000022202	-	89	74.762	ENSRBIG00000031315	EMG1	86	74.762	Rhinopithecus_bieti
ENSCING00000022202	-	89	74.762	ENSRROG00000032961	EMG1	86	74.762	Rhinopithecus_roxellana
ENSCING00000022202	-	89	50.893	YLR186W	EMG1	88	50.893	Saccharomyces_cerevisiae
ENSCING00000022202	-	89	73.810	ENSSBOG00000029143	-	86	73.810	Saimiri_boliviensis_boliviensis
ENSCING00000022202	-	86	51.961	ENSSBOG00000022895	-	81	51.961	Saimiri_boliviensis_boliviensis
ENSCING00000022202	-	88	73.684	ENSSHAG00000016428	EMG1	97	66.807	Sarcophilus_harrisii
ENSCING00000022202	-	98	68.376	ENSSFOG00015002421	emg1	97	68.376	Scleropages_formosus
ENSCING00000022202	-	98	67.811	ENSSMAG00000011806	emg1	97	67.811	Scophthalmus_maximus
ENSCING00000022202	-	98	67.811	ENSSDUG00000011345	emg1	92	67.811	Seriola_dumerili
ENSCING00000022202	-	98	67.811	ENSSLDG00000023439	emg1	92	67.811	Seriola_lalandi_dorsalis
ENSCING00000022202	-	100	55.462	ENSSARG00000002227	EMG1	97	55.462	Sorex_araneus
ENSCING00000022202	-	98	64.807	ENSSPUG00000014446	EMG1	97	64.807	Sphenodon_punctatus
ENSCING00000022202	-	99	67.373	ENSSPAG00000005460	emg1	99	67.373	Stegastes_partitus
ENSCING00000022202	-	100	67.227	ENSSSCG00000026812	EMG1	97	67.227	Sus_scrofa
ENSCING00000022202	-	86	73.171	ENSTGUG00000013271	EMG1	99	73.171	Taeniopygia_guttata
ENSCING00000022202	-	98	68.240	ENSTRUG00000001906	emg1	97	68.240	Takifugu_rubripes
ENSCING00000022202	-	98	67.382	ENSTNIG00000008047	emg1	95	67.382	Tetraodon_nigroviridis
ENSCING00000022202	-	87	74.272	ENSTBEG00000015406	EMG1	98	74.272	Tupaia_belangeri
ENSCING00000022202	-	100	55.882	ENSTTRG00000004810	EMG1	97	55.882	Tursiops_truncatus
ENSCING00000022202	-	100	68.067	ENSUAMG00000026959	EMG1	97	68.067	Ursus_americanus
ENSCING00000022202	-	89	74.286	ENSUMAG00000003248	EMG1	86	74.286	Ursus_maritimus
ENSCING00000022202	-	89	74.286	ENSVVUG00000010807	EMG1	97	68.067	Vulpes_vulpes
ENSCING00000022202	-	86	69.118	ENSXETG00000023917	emg1	99	69.118	Xenopus_tropicalis
ENSCING00000022202	-	98	65.665	ENSXMAG00000011508	emg1	98	65.665	Xiphophorus_maculatus