EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000022368 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 420 bases
Position: chr3:1300544-1300963
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000034734	L51_S25_CI-B8	PF05047.16	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031506	-	420	-	ENSCINP00000034734	140 (aa)	-	H2XYK0

Gene Model

Click here to download ENSCING00000022368's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000022368's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000022368	-	96	43.066	ENSG00000055950	MRPL43	91	42.500	Homo_sapiens
ENSCING00000022368	-	100	47.887	ENSAPOG00000020476	mrpl43	93	47.887	Acanthochromis_polyacanthus
ENSCING00000022368	-	96	45.588	ENSAMEG00000017570	MRPL43	51	45.588	Ailuropoda_melanoleuca
ENSCING00000022368	-	100	46.154	ENSACIG00000010217	mrpl43	93	46.154	Amphilophus_citrinellus
ENSCING00000022368	-	100	46.479	ENSAOCG00000009295	mrpl43	93	46.479	Amphiprion_ocellaris
ENSCING00000022368	-	100	46.479	ENSAPEG00000002700	mrpl43	93	46.479	Amphiprion_percula
ENSCING00000022368	-	100	43.662	ENSATEG00000006106	mrpl43	93	43.662	Anabas_testudineus
ENSCING00000022368	-	96	48.148	ENSACAG00000003798	MRPL43	87	48.148	Anolis_carolinensis
ENSCING00000022368	-	98	43.885	ENSANAG00000034938	MRPL43	83	43.885	Aotus_nancymaae
ENSCING00000022368	-	100	46.853	ENSACLG00000026075	mrpl43	93	46.853	Astatotilapia_calliptera
ENSCING00000022368	-	96	45.985	ENSAMXG00000039634	mrpl43	91	45.985	Astyanax_mexicanus
ENSCING00000022368	-	96	45.255	ENSBTAG00000003294	MRPL43	85	45.255	Bos_taurus
ENSCING00000022368	-	89	41.600	WBGene00007712	mrpl-34	66	41.600	Caenorhabditis_elegans
ENSCING00000022368	-	97	39.706	ENSCJAG00000043882	-	61	39.706	Callithrix_jacchus
ENSCING00000022368	-	98	43.165	ENSCJAG00000017480	-	86	43.165	Callithrix_jacchus
ENSCING00000022368	-	96	45.255	ENSCAFG00000009742	MRPL43	52	45.255	Canis_familiaris
ENSCING00000022368	-	96	45.255	ENSCAFG00020009048	MRPL43	85	45.255	Canis_lupus_dingo
ENSCING00000022368	-	96	45.255	ENSCHIG00000023474	MRPL43	85	45.255	Capra_hircus
ENSCING00000022368	-	98	41.606	ENSCPOG00000040768	MRPL43	86	41.606	Cavia_porcellus
ENSCING00000022368	-	98	43.885	ENSCCAG00000027213	MRPL43	83	43.885	Cebus_capucinus
ENSCING00000022368	-	96	43.796	ENSCATG00000045001	MRPL43	82	43.796	Cercocebus_atys
ENSCING00000022368	-	96	45.985	ENSCLAG00000003510	MRPL43	85	45.985	Chinchilla_lanigera
ENSCING00000022368	-	96	42.222	ENSCSAG00000005558	MRPL43	85	42.222	Chlorocebus_sabaeus
ENSCING00000022368	-	96	44.526	ENSCPBG00000003402	MRPL43	87	44.526	Chrysemys_picta_bellii
ENSCING00000022368	-	96	47.826	ENSCGRG00001003475	Mrpl43	85	47.826	Cricetulus_griseus_chok1gshd
ENSCING00000022368	-	96	41.481	ENSCSEG00000010410	mrpl43	88	41.481	Cynoglossus_semilaevis
ENSCING00000022368	-	96	45.926	ENSCVAG00000008026	mrpl43	89	45.926	Cyprinodon_variegatus
ENSCING00000022368	-	100	44.286	ENSDARG00000076334	mrpl43	95	44.286	Danio_rerio
ENSCING00000022368	-	96	41.481	ENSDNOG00000003835	MRPL43	52	41.176	Dasypus_novemcinctus
ENSCING00000022368	-	96	45.985	ENSDORG00000023986	Mrpl43	87	45.985	Dipodomys_ordii
ENSCING00000022368	-	92	41.481	FBgn0034893	mRpL43	70	41.481	Drosophila_melanogaster
ENSCING00000022368	-	96	43.704	ENSETEG00000012498	MRPL43	55	43.704	Echinops_telfairi
ENSCING00000022368	-	100	46.429	ENSEBUG00000002711	mrpl43	68	46.429	Eptatretus_burgeri
ENSCING00000022368	-	96	44.526	ENSEASG00005008925	MRPL43	91	44.526	Equus_asinus_asinus
ENSCING00000022368	-	96	42.963	ENSEEUG00000004807	MRPL43	52	42.963	Erinaceus_europaeus
ENSCING00000022368	-	100	45.000	ENSELUG00000010110	RM43	93	45.000	Esox_lucius
ENSCING00000022368	-	100	42.254	ENSFCAG00000015693	MRPL43	79	42.963	Felis_catus
ENSCING00000022368	-	96	44.604	ENSFALG00000008683	MRPL43	90	44.604	Ficedula_albicollis
ENSCING00000022368	-	100	42.143	ENSGMOG00000009899	mrpl43	99	42.143	Gadus_morhua
ENSCING00000022368	-	96	45.985	ENSGALG00000034352	MRPL43	90	45.985	Gallus_gallus
ENSCING00000022368	-	96	46.269	ENSGAFG00000012028	mrpl43	76	46.269	Gambusia_affinis
ENSCING00000022368	-	100	48.611	ENSGACG00000003498	mrpl43	90	48.611	Gasterosteus_aculeatus
ENSCING00000022368	-	96	43.796	ENSGAGG00000018795	MRPL43	87	43.796	Gopherus_agassizii
ENSCING00000022368	-	96	43.066	ENSGGOG00000023716	MRPL43	82	43.066	Gorilla_gorilla
ENSCING00000022368	-	100	46.853	ENSHBUG00000006858	mrpl43	93	46.853	Haplochromis_burtoni
ENSCING00000022368	-	96	45.185	ENSHGLG00000002213	MRPL43	84	45.185	Heterocephalus_glaber_female
ENSCING00000022368	-	96	47.826	ENSHCOG00000011406	mrpl43	92	47.826	Hippocampus_comes
ENSCING00000022368	-	96	45.926	ENSIPUG00000015563	mrpl43	91	45.926	Ictalurus_punctatus
ENSCING00000022368	-	96	43.796	ENSSTOG00000009016	MRPL43	85	43.796	Ictidomys_tridecemlineatus
ENSCING00000022368	-	96	43.796	ENSJJAG00000023922	Mrpl43	87	43.796	Jaculus_jaculus
ENSCING00000022368	-	100	44.286	ENSKMAG00000006900	mrpl43	92	44.286	Kryptolebias_marmoratus
ENSCING00000022368	-	100	47.887	ENSLBEG00000028159	mrpl43	93	47.887	Labrus_bergylta
ENSCING00000022368	-	96	45.926	ENSLOCG00000012629	mrpl43	89	45.926	Lepisosteus_oculatus
ENSCING00000022368	-	96	46.715	ENSLAFG00000028961	MRPL43	87	46.715	Loxodonta_africana
ENSCING00000022368	-	69	45.361	ENSMFAG00000001890	-	72	45.361	Macaca_fascicularis
ENSCING00000022368	-	96	43.796	ENSMFAG00000036954	-	82	43.796	Macaca_fascicularis
ENSCING00000022368	-	69	45.361	ENSMMUG00000045161	-	72	45.361	Macaca_mulatta
ENSCING00000022368	-	96	43.796	ENSMMUG00000010679	-	82	43.796	Macaca_mulatta
ENSCING00000022368	-	96	43.796	ENSMNEG00000038269	MRPL43	82	43.796	Macaca_nemestrina
ENSCING00000022368	-	96	43.796	ENSMLEG00000031351	MRPL43	82	43.796	Mandrillus_leucophaeus
ENSCING00000022368	-	100	47.552	ENSMAMG00000004808	mrpl43	93	47.552	Mastacembelus_armatus
ENSCING00000022368	-	100	46.853	ENSMZEG00005006080	mrpl43	93	46.853	Maylandia_zebra
ENSCING00000022368	-	96	47.101	ENSMAUG00000015594	Mrpl43	86	47.101	Mesocricetus_auratus
ENSCING00000022368	-	96	43.796	ENSMICG00000043132	-	82	43.796	Microcebus_murinus
ENSCING00000022368	-	96	43.796	ENSMICG00000000014	-	82	43.796	Microcebus_murinus
ENSCING00000022368	-	96	45.255	ENSMOCG00000008602	Mrpl43	85	45.255	Microtus_ochrogaster
ENSCING00000022368	-	100	47.222	ENSMMOG00000020907	mrpl43	92	47.222	Mola_mola
ENSCING00000022368	-	96	44.444	ENSMODG00000011975	-	77	44.444	Monodelphis_domestica
ENSCING00000022368	-	100	47.222	ENSMALG00000007886	mrpl43	94	47.222	Monopterus_albus
ENSCING00000022368	-	96	45.985	MGP_CAROLIEiJ_G0023007	Mrpl43	85	45.985	Mus_caroli
ENSCING00000022368	-	96	45.985	ENSMUSG00000025208	Mrpl43	85	45.985	Mus_musculus
ENSCING00000022368	-	96	45.985	MGP_PahariEiJ_G0014497	Mrpl43	85	45.985	Mus_pahari
ENSCING00000022368	-	96	45.985	MGP_SPRETEiJ_G0023928	Mrpl43	85	45.985	Mus_spretus
ENSCING00000022368	-	96	43.066	ENSMPUG00000016942	MRPL43	51	43.066	Mustela_putorius_furo
ENSCING00000022368	-	96	42.963	ENSMLUG00000013678	MRPL43	52	42.963	Myotis_lucifugus
ENSCING00000022368	-	96	45.652	ENSNGAG00000023476	Mrpl43	85	45.652	Nannospalax_galili
ENSCING00000022368	-	100	46.853	ENSNBRG00000005614	mrpl43	93	46.853	Neolamprologus_brichardi
ENSCING00000022368	-	96	39.259	ENSNLEG00000019250	-	85	39.259	Nomascus_leucogenys
ENSCING00000022368	-	96	37.037	ENSNLEG00000030260	-	86	37.037	Nomascus_leucogenys
ENSCING00000022368	-	96	43.066	ENSNLEG00000014812	-	82	43.066	Nomascus_leucogenys
ENSCING00000022368	-	96	43.704	ENSMEUG00000014589	MRPL43	57	43.704	Notamacropus_eugenii
ENSCING00000022368	-	96	44.444	ENSOPRG00000007093	MRPL43	53	44.444	Ochotona_princeps
ENSCING00000022368	-	96	44.444	ENSODEG00000000523	-	77	44.444	Octodon_degus
ENSCING00000022368	-	96	44.444	ENSODEG00000006668	-	74	44.444	Octodon_degus
ENSCING00000022368	-	59	46.341	ENSOANG00000007327	-	95	46.341	Ornithorhynchus_anatinus
ENSCING00000022368	-	84	38.462	ENSOCUG00000002742	-	67	38.462	Oryctolagus_cuniculus
ENSCING00000022368	-	96	49.275	ENSORLG00000011530	mrpl43	90	49.275	Oryzias_latipes
ENSCING00000022368	-	96	49.275	ENSORLG00020001740	mrpl43	91	49.275	Oryzias_latipes_hni
ENSCING00000022368	-	96	49.275	ENSORLG00015000014	mrpl43	90	49.275	Oryzias_latipes_hsok
ENSCING00000022368	-	100	48.252	ENSOMEG00000005471	mrpl43	93	48.252	Oryzias_melastigma
ENSCING00000022368	-	98	43.165	ENSOGAG00000030715	MRPL43	53	43.165	Otolemur_garnettii
ENSCING00000022368	-	96	42.336	ENSOARG00000016032	MRPL43	50	42.336	Ovis_aries
ENSCING00000022368	-	96	42.336	ENSPPAG00000042828	MRPL43	68	42.336	Pan_paniscus
ENSCING00000022368	-	100	42.254	ENSPPRG00000024398	MRPL43	82	42.963	Panthera_pardus
ENSCING00000022368	-	96	38.519	ENSPTIG00000019483	MRPL43	79	38.519	Panthera_tigris_altaica
ENSCING00000022368	-	96	43.066	ENSPTRG00000002858	MRPL43	82	43.066	Pan_troglodytes
ENSCING00000022368	-	96	43.796	ENSPANG00000021122	MRPL43	82	43.796	Papio_anubis
ENSCING00000022368	-	96	46.667	ENSPKIG00000012675	mrpl43	89	46.667	Paramormyrops_kingsleyae
ENSCING00000022368	-	74	37.143	ENSPSIG00000011117	MRPL43	83	37.143	Pelodiscus_sinensis
ENSCING00000022368	-	100	47.222	ENSPMGG00000014529	mrpl43	93	47.222	Periophthalmus_magnuspinnatus
ENSCING00000022368	-	96	45.985	ENSPEMG00000001510	Mrpl43	85	45.985	Peromyscus_maniculatus_bairdii
ENSCING00000022368	-	100	47.143	ENSPMAG00000003349	mrpl43	90	47.143	Petromyzon_marinus
ENSCING00000022368	-	96	47.015	ENSPFOG00000016638	mrpl43	89	47.015	Poecilia_formosa
ENSCING00000022368	-	96	41.045	ENSPLAG00000004474	mrpl43	88	41.045	Poecilia_latipinna
ENSCING00000022368	-	96	47.015	ENSPMEG00000003984	mrpl43	89	47.015	Poecilia_mexicana
ENSCING00000022368	-	96	46.269	ENSPREG00000010980	mrpl43	88	46.269	Poecilia_reticulata
ENSCING00000022368	-	89	44.882	ENSPPYG00000002575	-	62	44.882	Pongo_abelii
ENSCING00000022368	-	96	45.926	ENSPCAG00000012538	MRPL43	53	45.926	Procavia_capensis
ENSCING00000022368	-	96	44.526	ENSPCOG00000027271	MRPL43	82	44.526	Propithecus_coquereli
ENSCING00000022368	-	96	45.255	ENSPVAG00000002153	MRPL43	52	45.255	Pteropus_vampyrus
ENSCING00000022368	-	100	46.853	ENSPNYG00000003000	mrpl43	93	46.853	Pundamilia_nyererei
ENSCING00000022368	-	96	46.715	ENSPNAG00000004972	mrpl43	91	46.715	Pygocentrus_nattereri
ENSCING00000022368	-	96	44.526	ENSRNOG00000014890	Mrpl43	87	44.526	Rattus_norvegicus
ENSCING00000022368	-	96	43.796	ENSRBIG00000029374	MRPL43	82	43.796	Rhinopithecus_bieti
ENSCING00000022368	-	96	43.796	ENSRROG00000036241	MRPL43	82	43.796	Rhinopithecus_roxellana
ENSCING00000022368	-	98	43.885	ENSSBOG00000022294	MRPL43	83	43.885	Saimiri_boliviensis_boliviensis
ENSCING00000022368	-	96	42.222	ENSSHAG00000013782	MRPL43	65	42.222	Sarcophilus_harrisii
ENSCING00000022368	-	96	49.630	ENSSFOG00015003599	mrpl43	89	49.630	Scleropages_formosus
ENSCING00000022368	-	100	46.528	ENSSMAG00000007436	mrpl43	93	46.528	Scophthalmus_maximus
ENSCING00000022368	-	100	47.917	ENSSDUG00000012344	mrpl43	93	47.917	Seriola_dumerili
ENSCING00000022368	-	100	47.917	ENSSLDG00000006932	mrpl43	93	47.917	Seriola_lalandi_dorsalis
ENSCING00000022368	-	96	45.255	ENSSPUG00000011319	MRPL43	87	45.255	Sphenodon_punctatus
ENSCING00000022368	-	100	47.222	ENSSPAG00000005558	mrpl43	93	47.222	Stegastes_partitus
ENSCING00000022368	-	96	45.255	ENSSSCG00000010560	MRPL43	85	45.255	Sus_scrofa
ENSCING00000022368	-	82	43.697	ENSTGUG00000010071	MRPL43	89	43.697	Taeniopygia_guttata
ENSCING00000022368	-	94	45.802	ENSTRUG00000021665	mrpl43	86	45.802	Takifugu_rubripes
ENSCING00000022368	-	90	46.825	ENSTNIG00000014427	mrpl43	82	46.825	Tetraodon_nigroviridis
ENSCING00000022368	-	96	45.985	ENSTTRG00000015111	MRPL43	52	45.985	Tursiops_truncatus
ENSCING00000022368	-	96	43.796	ENSUAMG00000018200	MRPL43	85	43.796	Ursus_americanus
ENSCING00000022368	-	100	42.958	ENSUMAG00000022958	MRPL43	84	44.526	Ursus_maritimus
ENSCING00000022368	-	96	45.255	ENSVVUG00000000360	MRPL43	68	45.255	Vulpes_vulpes
ENSCING00000022368	-	96	47.407	ENSXETG00000015206	mrpl43	87	47.407	Xenopus_tropicalis
ENSCING00000022368	-	96	46.269	ENSXMAG00000017648	mrpl43	89	46.269	Xiphophorus_maculatus