EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000022650 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ATP-dependent RNA helicase HAS1-like
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1884 bases
Position: chr13:652672-654555
Accession: 100175182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032454	DEAD	PF00270.29	1.8e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000036295	-	1884	-	ENSCINP00000032454	627 (aa)	XP_018670140	H2XS20

Gene Model

Click here to download ENSCING00000022650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000022650's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000022650	-	86	71.325	ENSG00000088205	DDX18	100	75.536	Homo_sapiens
ENSCING00000022650	-	78	77.419	ENSAPOG00000019022	ddx18	78	77.621	Acanthochromis_polyacanthus
ENSCING00000022650	-	88	66.068	ENSAMEG00000012626	DDX18	74	72.379	Ailuropoda_melanoleuca
ENSCING00000022650	-	78	77.621	ENSACIG00000018534	ddx18	79	77.823	Amphilophus_citrinellus
ENSCING00000022650	-	78	77.419	ENSAOCG00000012438	ddx18	74	77.621	Amphiprion_ocellaris
ENSCING00000022650	-	78	77.419	ENSAPEG00000002348	ddx18	74	77.621	Amphiprion_percula
ENSCING00000022650	-	78	76.815	ENSATEG00000006330	ddx18	83	77.016	Anabas_testudineus
ENSCING00000022650	-	78	76.210	ENSAPLG00000011648	DDX18	95	76.411	Anas_platyrhynchos
ENSCING00000022650	-	99	64.780	ENSACAG00000002045	DDX18	74	75.605	Anolis_carolinensis
ENSCING00000022650	-	84	70.280	ENSANAG00000024417	-	75	74.044	Aotus_nancymaae
ENSCING00000022650	-	87	53.464	ENSANAG00000026802	-	77	58.669	Aotus_nancymaae
ENSCING00000022650	-	78	50.000	ENSANAG00000034318	-	72	50.806	Aotus_nancymaae
ENSCING00000022650	-	67	65.187	ENSANAG00000025869	-	69	65.187	Aotus_nancymaae
ENSCING00000022650	-	84	70.391	ENSANAG00000037489	-	72	74.447	Aotus_nancymaae
ENSCING00000022650	-	78	77.218	ENSACLG00000000352	ddx18	80	77.419	Astatotilapia_calliptera
ENSCING00000022650	-	99	63.253	ENSAMXG00000024269	ddx18	69	78.024	Astyanax_mexicanus
ENSCING00000022650	-	60	82.888	ENSAMXG00000042612	-	83	82.888	Astyanax_mexicanus
ENSCING00000022650	-	78	75.000	ENSBTAG00000015077	-	74	75.403	Bos_taurus
ENSCING00000022650	-	86	69.470	ENSBTAG00000027319	-	70	76.653	Bos_taurus
ENSCING00000022650	-	72	67.770	WBGene00015232	B0511.6	83	67.770	Caenorhabditis_elegans
ENSCING00000022650	-	87	69.604	ENSCJAG00000021414	DDX18	73	75.252	Callithrix_jacchus
ENSCING00000022650	-	88	69.355	ENSCAFG00000004950	DDX18	74	75.806	Canis_familiaris
ENSCING00000022650	-	88	67.384	ENSCAFG00020014114	DDX18	74	73.589	Canis_lupus_dingo
ENSCING00000022650	-	78	75.605	ENSCHIG00000019280	DDX18	77	76.008	Capra_hircus
ENSCING00000022650	-	88	69.550	ENSTSYG00000002540	DDX18	74	75.605	Carlito_syrichta
ENSCING00000022650	-	76	38.912	ENSCAPG00000002364	-	54	38.912	Cavia_aperea
ENSCING00000022650	-	78	74.798	ENSCAPG00000004039	DDX18	83	75.202	Cavia_aperea
ENSCING00000022650	-	78	74.798	ENSCPOG00000007532	DDX18	75	75.202	Cavia_porcellus
ENSCING00000022650	-	92	51.635	ENSCCAG00000018129	-	79	56.855	Cebus_capucinus
ENSCING00000022650	-	78	55.804	ENSCCAG00000028017	-	78	55.804	Cebus_capucinus
ENSCING00000022650	-	88	69.964	ENSCCAG00000023595	-	90	75.654	Cebus_capucinus
ENSCING00000022650	-	88	69.369	ENSCATG00000036838	DDX18	74	75.453	Cercocebus_atys
ENSCING00000022650	-	82	52.023	ENSCATG00000033079	-	72	55.195	Cercocebus_atys
ENSCING00000022650	-	87	69.120	ENSCLAG00000004684	DDX18	74	75.403	Chinchilla_lanigera
ENSCING00000022650	-	88	70.377	ENSCSAG00000016508	DDX18	73	75.758	Chlorocebus_sabaeus
ENSCING00000022650	-	71	75.497	ENSCHOG00000004191	DDX18	71	76.159	Choloepus_hoffmanni
ENSCING00000022650	-	87	70.536	ENSCPBG00000010529	DDX18	74	77.621	Chrysemys_picta_bellii
ENSCING00000022650	-	90	85.159	ENSCSAVG00000004895	-	100	84.452	Ciona_savignyi
ENSCING00000022650	-	82	53.801	ENSCANG00000043728	-	73	58.057	Colobus_angolensis_palliatus
ENSCING00000022650	-	91	55.422	ENSCANG00000028903	-	72	60.484	Colobus_angolensis_palliatus
ENSCING00000022650	-	88	70.018	ENSCANG00000021885	-	74	75.252	Colobus_angolensis_palliatus
ENSCING00000022650	-	88	63.375	ENSCANG00000019507	-	72	67.807	Colobus_angolensis_palliatus
ENSCING00000022650	-	89	61.879	ENSCGRG00001016185	-	79	67.540	Cricetulus_griseus_chok1gshd
ENSCING00000022650	-	87	70.182	ENSCGRG00001010803	-	75	75.806	Cricetulus_griseus_chok1gshd
ENSCING00000022650	-	89	61.879	ENSCGRG00000013152	-	79	67.540	Cricetulus_griseus_crigri
ENSCING00000022650	-	87	70.182	ENSCGRG00000008440	-	75	75.806	Cricetulus_griseus_crigri
ENSCING00000022650	-	78	75.960	ENSCSEG00000015266	ddx18	74	75.960	Cynoglossus_semilaevis
ENSCING00000022650	-	99	62.443	ENSCVAG00000017936	ddx18	77	76.008	Cyprinodon_variegatus
ENSCING00000022650	-	78	76.411	ENSDARG00000030789	ddx18	76	76.613	Danio_rerio
ENSCING00000022650	-	78	36.504	ENSDNOG00000043539	-	69	36.856	Dasypus_novemcinctus
ENSCING00000022650	-	59	79.893	ENSDNOG00000019096	-	68	79.893	Dasypus_novemcinctus
ENSCING00000022650	-	99	63.722	ENSDORG00000011340	Ddx18	83	73.372	Dipodomys_ordii
ENSCING00000022650	-	74	73.160	FBgn0266581	pit	68	73.160	Drosophila_melanogaster
ENSCING00000022650	-	56	78.947	ENSEBUG00000006265	ddx18	75	78.947	Eptatretus_burgeri
ENSCING00000022650	-	95	65.174	ENSECAG00000015740	DDX18	67	79.817	Equus_caballus
ENSCING00000022650	-	78	75.252	ENSEEUG00000000322	DDX18	74	75.252	Erinaceus_europaeus
ENSCING00000022650	-	78	76.411	ENSELUG00000008640	ddx18	74	76.613	Esox_lucius
ENSCING00000022650	-	88	70.324	ENSFCAG00000000753	DDX18	73	76.210	Felis_catus
ENSCING00000022650	-	78	76.056	ENSFALG00000013672	DDX18	74	76.056	Ficedula_albicollis
ENSCING00000022650	-	76	42.348	ENSFDAG00000018286	-	52	42.581	Fukomys_damarensis
ENSCING00000022650	-	87	69.189	ENSFDAG00000014703	DDX18	66	75.403	Fukomys_damarensis
ENSCING00000022650	-	78	74.949	ENSGMOG00000007113	ddx18	93	74.949	Gadus_morhua
ENSCING00000022650	-	70	44.191	ENSGALG00000017156	DDX10	50	44.191	Gallus_gallus
ENSCING00000022650	-	86	70.397	ENSGALG00000012147	DDX18	75	76.815	Gallus_gallus
ENSCING00000022650	-	78	75.806	ENSGAFG00000019028	ddx18	84	76.210	Gambusia_affinis
ENSCING00000022650	-	99	63.932	ENSGACG00000001563	ddx18	90	72.128	Gasterosteus_aculeatus
ENSCING00000022650	-	88	54.955	ENSGGOG00000040382	-	72	59.677	Gorilla_gorilla
ENSCING00000022650	-	85	52.126	ENSGGOG00000039210	-	76	55.242	Gorilla_gorilla
ENSCING00000022650	-	86	71.143	ENSGGOG00000028420	DDX18	74	75.654	Gorilla_gorilla
ENSCING00000022650	-	78	77.218	ENSHBUG00000001204	ddx18	76	77.419	Haplochromis_burtoni
ENSCING00000022650	-	73	67.253	ENSHGLG00000005983	-	71	67.253	Heterocephalus_glaber_female
ENSCING00000022650	-	78	75.506	ENSHGLG00000016324	-	75	75.911	Heterocephalus_glaber_female
ENSCING00000022650	-	78	75.506	ENSHGLG00100001563	DDX18	75	75.911	Heterocephalus_glaber_male
ENSCING00000022650	-	78	76.411	ENSHCOG00000007568	ddx18	81	76.613	Hippocampus_comes
ENSCING00000022650	-	99	61.970	ENSSTOG00000010541	DDX18	76	75.000	Ictidomys_tridecemlineatus
ENSCING00000022650	-	78	71.255	ENSJJAG00000023769	-	74	71.515	Jaculus_jaculus
ENSCING00000022650	-	78	71.573	ENSJJAG00000017042	-	75	72.032	Jaculus_jaculus
ENSCING00000022650	-	78	74.648	ENSKMAG00000005975	ddx18	92	74.648	Kryptolebias_marmoratus
ENSCING00000022650	-	78	76.970	ENSLBEG00000023115	DDX18	77	76.970	Labrus_bergylta
ENSCING00000022650	-	78	76.970	ENSLBEG00000027227	ddx18	76	76.970	Labrus_bergylta
ENSCING00000022650	-	92	65.833	ENSLACG00000015308	DDX18	86	75.855	Latimeria_chalumnae
ENSCING00000022650	-	78	76.210	ENSLOCG00000003108	ddx18	75	76.613	Lepisosteus_oculatus
ENSCING00000022650	-	85	69.926	ENSLAFG00000006915	DDX18	75	74.798	Loxodonta_africana
ENSCING00000022650	-	84	58.052	ENSMFAG00000035685	-	73	61.945	Macaca_fascicularis
ENSCING00000022650	-	87	70.450	ENSMFAG00000043075	DDX18	74	75.758	Macaca_fascicularis
ENSCING00000022650	-	84	57.250	ENSMMUG00000029623	-	75	60.677	Macaca_mulatta
ENSCING00000022650	-	87	66.367	ENSMMUG00000021343	DDX18	73	71.169	Macaca_mulatta
ENSCING00000022650	-	83	50.649	ENSMNEG00000031049	-	73	53.049	Macaca_nemestrina
ENSCING00000022650	-	87	70.450	ENSMNEG00000032172	DDX18	74	75.758	Macaca_nemestrina
ENSCING00000022650	-	88	70.197	ENSMLEG00000038065	DDX18	74	75.453	Mandrillus_leucophaeus
ENSCING00000022650	-	78	61.429	ENSMLEG00000029597	-	79	60.408	Mandrillus_leucophaeus
ENSCING00000022650	-	78	76.613	ENSMAMG00000009100	ddx18	82	76.815	Mastacembelus_armatus
ENSCING00000022650	-	78	77.218	ENSMZEG00005013189	ddx18	81	77.419	Maylandia_zebra
ENSCING00000022650	-	78	76.104	ENSMGAG00000012345	DDX18	83	76.506	Meleagris_gallopavo
ENSCING00000022650	-	74	44.374	ENSMAUG00000009113	-	53	44.374	Mesocricetus_auratus
ENSCING00000022650	-	78	75.403	ENSMAUG00000015244	Ddx18	75	75.403	Mesocricetus_auratus
ENSCING00000022650	-	99	63.867	ENSMICG00000047072	-	74	76.210	Microcebus_murinus
ENSCING00000022650	-	88	58.124	ENSMICG00000027163	-	73	76.094	Microcebus_murinus
ENSCING00000022650	-	78	71.573	ENSMOCG00000013664	-	78	71.573	Microtus_ochrogaster
ENSCING00000022650	-	78	71.429	ENSMOCG00000019953	-	76	71.831	Microtus_ochrogaster
ENSCING00000022650	-	78	68.952	ENSMOCG00000012842	-	74	70.565	Microtus_ochrogaster
ENSCING00000022650	-	78	75.252	ENSMMOG00000019289	ddx18	93	75.252	Mola_mola
ENSCING00000022650	-	93	67.112	ENSMODG00000000533	DDX18	74	80.044	Monodelphis_domestica
ENSCING00000022650	-	78	76.815	ENSMALG00000008644	ddx18	78	77.016	Monopterus_albus
ENSCING00000022650	-	97	63.902	MGP_CAROLIEiJ_G0014529	Ddx18	75	75.000	Mus_caroli
ENSCING00000022650	-	99	63.275	ENSMUSG00000001674	Ddx18	75	75.605	Mus_musculus
ENSCING00000022650	-	97	64.553	MGP_PahariEiJ_G0027765	Ddx18	75	75.605	Mus_pahari
ENSCING00000022650	-	93	65.925	MGP_SPRETEiJ_G0015336	Ddx18	68	79.379	Mus_spretus
ENSCING00000022650	-	88	69.286	ENSMPUG00000000856	-	74	75.605	Mustela_putorius_furo
ENSCING00000022650	-	70	65.000	ENSMPUG00000000414	-	99	65.000	Mustela_putorius_furo
ENSCING00000022650	-	86	69.708	ENSMLUG00000017607	DDX18	74	75.605	Myotis_lucifugus
ENSCING00000022650	-	78	73.904	ENSNGAG00000005624	Ddx18	75	74.104	Nannospalax_galili
ENSCING00000022650	-	81	58.641	ENSNLEG00000034613	-	66	66.667	Nomascus_leucogenys
ENSCING00000022650	-	86	70.962	ENSNLEG00000011769	DDX18	74	75.654	Nomascus_leucogenys
ENSCING00000022650	-	78	61.943	ENSNLEG00000027282	-	78	61.943	Nomascus_leucogenys
ENSCING00000022650	-	95	52.159	ENSNLEG00000032874	-	76	58.078	Nomascus_leucogenys
ENSCING00000022650	-	91	57.168	ENSNLEG00000034294	-	75	63.508	Nomascus_leucogenys
ENSCING00000022650	-	78	65.795	ENSMEUG00000011419	-	74	66.197	Notamacropus_eugenii
ENSCING00000022650	-	78	75.202	ENSOPRG00000001701	DDX18	75	75.605	Ochotona_princeps
ENSCING00000022650	-	78	74.798	ENSODEG00000007330	DDX18	75	75.202	Octodon_degus
ENSCING00000022650	-	78	77.218	ENSONIG00000007887	ddx18	75	77.419	Oreochromis_niloticus
ENSCING00000022650	-	78	50.405	ENSOCUG00000023972	-	98	50.405	Oryctolagus_cuniculus
ENSCING00000022650	-	89	67.782	ENSOCUG00000012586	-	74	75.252	Oryctolagus_cuniculus
ENSCING00000022650	-	78	76.210	ENSORLG00000008090	ddx18	77	76.411	Oryzias_latipes
ENSCING00000022650	-	72	41.943	ENSORLG00020006291	-	54	41.943	Oryzias_latipes_hni
ENSCING00000022650	-	78	76.411	ENSORLG00020022308	ddx18	77	76.613	Oryzias_latipes_hni
ENSCING00000022650	-	78	76.613	ENSORLG00015023091	ddx18	77	76.815	Oryzias_latipes_hsok
ENSCING00000022650	-	78	76.411	ENSOMEG00000017773	ddx18	76	76.613	Oryzias_melastigma
ENSCING00000022650	-	78	75.202	ENSOGAG00000007237	DDX18	73	75.453	Otolemur_garnettii
ENSCING00000022650	-	78	75.605	ENSOARG00000012040	DDX18	67	76.008	Ovis_aries
ENSCING00000022650	-	71	63.239	ENSPPAG00000030501	-	69	63.239	Pan_paniscus
ENSCING00000022650	-	86	71.143	ENSPPAG00000033473	DDX18	74	75.654	Pan_paniscus
ENSCING00000022650	-	88	70.324	ENSPPRG00000006406	DDX18	73	76.210	Panthera_pardus
ENSCING00000022650	-	88	70.324	ENSPTIG00000004868	DDX18	73	76.210	Panthera_tigris_altaica
ENSCING00000022650	-	99	64.196	ENSPTRG00000012391	DDX18	74	75.654	Pan_troglodytes
ENSCING00000022650	-	88	53.417	ENSPTRG00000045036	-	71	57.460	Pan_troglodytes
ENSCING00000022650	-	78	60.000	ENSPTRG00000047092	-	76	60.000	Pan_troglodytes
ENSCING00000022650	-	88	69.604	ENSPANG00000019899	DDX18	74	75.252	Papio_anubis
ENSCING00000022650	-	87	57.326	ENSPANG00000031669	-	78	59.109	Papio_anubis
ENSCING00000022650	-	89	69.366	ENSPKIG00000001118	ddx18	74	76.210	Paramormyrops_kingsleyae
ENSCING00000022650	-	87	69.821	ENSPSIG00000002977	DDX18	81	76.210	Pelodiscus_sinensis
ENSCING00000022650	-	81	73.879	ENSPMGG00000007162	ddx18	87	73.180	Periophthalmus_magnuspinnatus
ENSCING00000022650	-	99	63.722	ENSPEMG00000010438	-	75	76.008	Peromyscus_maniculatus_bairdii
ENSCING00000022650	-	77	66.132	ENSPMAG00000009147	ddx18	69	79.581	Petromyzon_marinus
ENSCING00000022650	-	99	63.651	ENSPCIG00000029015	DDX18	78	75.252	Phascolarctos_cinereus
ENSCING00000022650	-	78	75.605	ENSPFOG00000000969	ddx18	79	76.008	Poecilia_formosa
ENSCING00000022650	-	78	74.699	ENSPLAG00000005210	ddx18	93	75.100	Poecilia_latipinna
ENSCING00000022650	-	78	75.605	ENSPMEG00000014773	ddx18	79	76.008	Poecilia_mexicana
ENSCING00000022650	-	81	73.190	ENSPPYG00000012796	DDX18	72	79.823	Pongo_abelii
ENSCING00000022650	-	61	77.632	ENSPCAG00000010274	DDX18	58	77.632	Procavia_capensis
ENSCING00000022650	-	88	69.340	ENSPCOG00000016210	DDX18	74	76.008	Propithecus_coquereli
ENSCING00000022650	-	88	68.996	ENSPVAG00000006823	DDX18	74	75.605	Pteropus_vampyrus
ENSCING00000022650	-	78	77.016	ENSPNYG00000016437	ddx18	75	77.218	Pundamilia_nyererei
ENSCING00000022650	-	78	77.016	ENSPNAG00000024239	ddx18	75	77.218	Pygocentrus_nattereri
ENSCING00000022650	-	78	75.202	ENSRNOG00000025430	Ddx18	73	75.605	Rattus_norvegicus
ENSCING00000022650	-	84	50.943	ENSRBIG00000033443	-	73	53.441	Rhinopithecus_bieti
ENSCING00000022650	-	84	71.776	ENSRBIG00000036313	DDX18	74	75.453	Rhinopithecus_bieti
ENSCING00000022650	-	59	62.299	ENSRBIG00000038208	-	61	62.466	Rhinopithecus_bieti
ENSCING00000022650	-	84	71.776	ENSRROG00000007370	DDX18	74	75.453	Rhinopithecus_roxellana
ENSCING00000022650	-	59	59.626	ENSRROG00000030803	-	60	59.786	Rhinopithecus_roxellana
ENSCING00000022650	-	81	59.091	YMR290C	-	90	63.656	Saccharomyces_cerevisiae
ENSCING00000022650	-	70	65.675	ENSSBOG00000034289	-	79	65.675	Saimiri_boliviensis_boliviensis
ENSCING00000022650	-	86	58.148	ENSSBOG00000035646	-	74	61.837	Saimiri_boliviensis_boliviensis
ENSCING00000022650	-	99	63.509	ENSSHAG00000018781	DDX18	78	75.252	Sarcophilus_harrisii
ENSCING00000022650	-	78	77.016	ENSSFOG00015022557	ddx18	71	77.218	Scleropages_formosus
ENSCING00000022650	-	78	76.411	ENSSMAG00000001652	ddx18	71	76.613	Scophthalmus_maximus
ENSCING00000022650	-	78	76.411	ENSSDUG00000005957	ddx18	73	76.613	Seriola_dumerili
ENSCING00000022650	-	78	76.613	ENSSLDG00000003692	ddx18	87	76.613	Seriola_lalandi_dorsalis
ENSCING00000022650	-	78	75.654	ENSSARG00000005248	DDX18	99	75.654	Sorex_araneus
ENSCING00000022650	-	78	76.210	ENSSPUG00000016098	DDX18	77	76.411	Sphenodon_punctatus
ENSCING00000022650	-	78	77.016	ENSSPAG00000023389	ddx18	74	77.218	Stegastes_partitus
ENSCING00000022650	-	88	69.910	ENSSSCG00000015712	DDX18	63	75.403	Sus_scrofa
ENSCING00000022650	-	76	43.187	ENSSSCG00000015011	-	58	42.620	Sus_scrofa
ENSCING00000022650	-	85	71.087	ENSTGUG00000011611	DDX18	91	76.210	Taeniopygia_guttata
ENSCING00000022650	-	88	70.125	ENSTRUG00000005649	ddx18	76	76.411	Takifugu_rubripes
ENSCING00000022650	-	78	76.815	ENSTNIG00000017834	ddx18	89	76.815	Tetraodon_nigroviridis
ENSCING00000022650	-	78	62.097	ENSTBEG00000016543	DDX18	78	62.702	Tupaia_belangeri
ENSCING00000022650	-	88	68.941	ENSTTRG00000015218	DDX18	74	74.798	Tursiops_truncatus
ENSCING00000022650	-	88	69.189	ENSUAMG00000016457	DDX18	80	76.008	Ursus_americanus
ENSCING00000022650	-	78	75.605	ENSUMAG00000013505	DDX18	74	76.008	Ursus_maritimus
ENSCING00000022650	-	78	70.363	ENSXCOG00000015361	ddx18	94	70.109	Xiphophorus_couchianus
ENSCING00000022650	-	99	63.256	ENSXMAG00000018003	ddx18	79	76.008	Xiphophorus_maculatus