EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000022762 (Gene tree)
Gene ID: 100186336
Gene Symbol: -
Alias: -
Full Name: DNA demethylase ALKBH1
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 2644 bases
Position: chrHT001086.1:47074-49717
Accession: 100186336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000035408	2OG-FeII_Oxy_2	PF13532.6	1.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000034547	-	1333	XM_002120873	ENSCINP00000035408	288 (aa)	XP_002120909	H2Y0H4

Gene Model

Click here to download ENSCING00000022762's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000022762's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000022762	-	99	35.185	ENSG00000100601	ALKBH1	83	35.185	Homo_sapiens
ENSCING00000022762	-	99	33.956	ENSAPOG00000001293	alkbh1	83	33.956	Acanthochromis_polyacanthus
ENSCING00000022762	-	99	35.347	ENSAMEG00000003966	ALKBH1	83	35.347	Ailuropoda_melanoleuca
ENSCING00000022762	-	99	35.238	ENSACIG00000000165	alkbh1	83	35.238	Amphilophus_citrinellus
ENSCING00000022762	-	80	33.206	ENSAOCG00000009356	-	76	33.206	Amphiprion_ocellaris
ENSCING00000022762	-	76	34.413	ENSAOCG00000004578	-	80	34.413	Amphiprion_ocellaris
ENSCING00000022762	-	99	33.333	ENSAOCG00000006323	alkbh1	85	33.333	Amphiprion_ocellaris
ENSCING00000022762	-	99	33.333	ENSAPEG00000015899	alkbh1	83	33.333	Amphiprion_percula
ENSCING00000022762	-	76	34.413	ENSAPEG00000008720	-	83	34.413	Amphiprion_percula
ENSCING00000022762	-	90	30.822	ENSAPEG00000006841	-	73	30.822	Amphiprion_percula
ENSCING00000022762	-	99	35.759	ENSATEG00000013518	alkbh1	83	35.759	Anabas_testudineus
ENSCING00000022762	-	86	36.201	ENSAPLG00000015685	ALKBH1	85	36.201	Anas_platyrhynchos
ENSCING00000022762	-	94	36.928	ENSACAG00000017276	ALKBH1	84	36.250	Anolis_carolinensis
ENSCING00000022762	-	99	35.185	ENSANAG00000023679	ALKBH1	84	35.185	Aotus_nancymaae
ENSCING00000022762	-	99	31.046	ENSACLG00000017932	alkbh1	81	31.046	Astatotilapia_calliptera
ENSCING00000022762	-	99	33.758	ENSAMXG00000034307	alkbh1	82	33.861	Astyanax_mexicanus
ENSCING00000022762	-	99	34.251	ENSBTAG00000008133	ALKBH1	83	34.251	Bos_taurus
ENSCING00000022762	-	99	31.090	WBGene00021783	Y51H7C.5	82	31.090	Caenorhabditis_elegans
ENSCING00000022762	-	99	35.185	ENSCJAG00000016936	ALKBH1	83	35.185	Callithrix_jacchus
ENSCING00000022762	-	88	38.489	ENSCAFG00000017229	ALKBH1	70	38.489	Canis_familiaris
ENSCING00000022762	-	88	38.489	ENSCAFG00020000856	ALKBH1	70	38.489	Canis_lupus_dingo
ENSCING00000022762	-	99	33.639	ENSCHIG00000017896	ALKBH1	83	33.639	Capra_hircus
ENSCING00000022762	-	99	31.546	ENSTSYG00000010944	ALKBH1	82	31.546	Carlito_syrichta
ENSCING00000022762	-	82	32.061	ENSCAPG00000016188	ALKBH1	79	32.443	Cavia_aperea
ENSCING00000022762	-	99	35.583	ENSCPOG00000001498	ALKBH1	83	35.583	Cavia_porcellus
ENSCING00000022762	-	99	35.185	ENSCCAG00000037198	ALKBH1	83	35.185	Cebus_capucinus
ENSCING00000022762	-	99	35.077	ENSCATG00000003846	ALKBH1	83	35.077	Cercocebus_atys
ENSCING00000022762	-	99	35.671	ENSCLAG00000014129	ALKBH1	83	35.671	Chinchilla_lanigera
ENSCING00000022762	-	67	37.374	ENSCHOG00000001531	ALKBH1	58	37.374	Choloepus_hoffmanni
ENSCING00000022762	-	99	34.891	ENSCPBG00000026326	ALKBH1	84	35.294	Chrysemys_picta_bellii
ENSCING00000022762	-	96	70.833	ENSCSAVG00000011640	-	98	71.667	Ciona_savignyi
ENSCING00000022762	-	99	35.077	ENSCANG00000028132	ALKBH1	83	35.077	Colobus_angolensis_palliatus
ENSCING00000022762	-	99	34.242	ENSCGRG00001009815	Alkbh1	83	34.242	Cricetulus_griseus_chok1gshd
ENSCING00000022762	-	99	35.202	ENSCGRG00000009963	Alkbh1	83	35.202	Cricetulus_griseus_crigri
ENSCING00000022762	-	99	35.127	ENSCSEG00000015769	alkbh1	83	35.127	Cynoglossus_semilaevis
ENSCING00000022762	-	99	34.796	ENSCVAG00000012507	alkbh1	81	34.796	Cyprinodon_variegatus
ENSCING00000022762	-	99	35.443	ENSDARG00000071164	alkbh1	95	35.443	Danio_rerio
ENSCING00000022762	-	99	34.954	ENSDNOG00000007719	ALKBH1	84	34.954	Dasypus_novemcinctus
ENSCING00000022762	-	99	35.583	ENSDORG00000012377	Alkbh1	83	35.583	Dipodomys_ordii
ENSCING00000022762	-	99	37.195	FBgn0065035	AlkB	98	37.195	Drosophila_melanogaster
ENSCING00000022762	-	99	35.474	ENSETEG00000010342	ALKBH1	83	35.474	Echinops_telfairi
ENSCING00000022762	-	98	33.028	ENSEBUG00000006261	alkbh1	88	33.028	Eptatretus_burgeri
ENSCING00000022762	-	99	34.663	ENSEASG00005020190	ALKBH1	83	34.663	Equus_asinus_asinus
ENSCING00000022762	-	99	35.061	ENSECAG00000022027	ALKBH1	83	35.061	Equus_caballus
ENSCING00000022762	-	93	37.234	ENSELUG00000016747	alkbh1	69	37.234	Esox_lucius
ENSCING00000022762	-	99	32.808	ENSFCAG00000037897	ALKBH1	83	32.808	Felis_catus
ENSCING00000022762	-	99	35.238	ENSFALG00000012588	ALKBH1	85	35.238	Ficedula_albicollis
ENSCING00000022762	-	99	35.152	ENSFDAG00000019064	ALKBH1	84	35.152	Fukomys_damarensis
ENSCING00000022762	-	99	33.956	ENSFHEG00000015690	alkbh1	83	33.956	Fundulus_heteroclitus
ENSCING00000022762	-	87	35.821	ENSGMOG00000016932	alkbh1	95	35.821	Gadus_morhua
ENSCING00000022762	-	99	34.286	ENSGALG00000010485	ALKBH1	76	34.286	Gallus_gallus
ENSCING00000022762	-	99	33.856	ENSGAFG00000010990	alkbh1	83	33.856	Gambusia_affinis
ENSCING00000022762	-	85	36.604	ENSGACG00000013378	alkbh1	93	36.604	Gasterosteus_aculeatus
ENSCING00000022762	-	99	35.514	ENSGAGG00000009957	ALKBH1	84	35.913	Gopherus_agassizii
ENSCING00000022762	-	99	35.494	ENSGGOG00000011055	ALKBH1	83	35.494	Gorilla_gorilla
ENSCING00000022762	-	99	35.583	ENSHGLG00000015533	ALKBH1	83	35.583	Heterocephalus_glaber_female
ENSCING00000022762	-	99	35.583	ENSHGLG00100013968	ALKBH1	83	35.583	Heterocephalus_glaber_male
ENSCING00000022762	-	99	36.808	ENSHCOG00000006780	alkbh1	85	36.808	Hippocampus_comes
ENSCING00000022762	-	99	35.826	ENSIPUG00000010201	alkbh1	84	35.826	Ictalurus_punctatus
ENSCING00000022762	-	88	37.770	ENSSTOG00000003254	-	70	37.770	Ictidomys_tridecemlineatus
ENSCING00000022762	-	84	39.216	ENSSTOG00000024819	-	70	39.216	Ictidomys_tridecemlineatus
ENSCING00000022762	-	99	35.294	ENSJJAG00000019755	Alkbh1	83	35.294	Jaculus_jaculus
ENSCING00000022762	-	99	35.987	ENSKMAG00000002019	alkbh1	82	35.987	Kryptolebias_marmoratus
ENSCING00000022762	-	99	34.084	ENSLBEG00000007472	alkbh1	82	34.069	Labrus_bergylta
ENSCING00000022762	-	99	34.375	ENSLACG00000013496	ALKBH1	86	34.375	Latimeria_chalumnae
ENSCING00000022762	-	99	34.591	ENSLOCG00000008800	alkbh1	85	34.591	Lepisosteus_oculatus
ENSCING00000022762	-	99	34.848	ENSLAFG00000003475	ALKBH1	83	34.848	Loxodonta_africana
ENSCING00000022762	-	99	35.077	ENSMFAG00000001551	ALKBH1	83	35.077	Macaca_fascicularis
ENSCING00000022762	-	99	35.077	ENSMMUG00000023626	ALKBH1	83	35.077	Macaca_mulatta
ENSCING00000022762	-	99	32.615	ENSMNEG00000033314	ALKBH1	82	32.615	Macaca_nemestrina
ENSCING00000022762	-	99	35.077	ENSMLEG00000033965	ALKBH1	83	35.077	Mandrillus_leucophaeus
ENSCING00000022762	-	99	35.604	ENSMAMG00000016048	alkbh1	90	35.604	Mastacembelus_armatus
ENSCING00000022762	-	99	32.927	ENSMZEG00005004627	alkbh1	84	32.927	Maylandia_zebra
ENSCING00000022762	-	86	37.276	ENSMGAG00000012910	ALKBH1	85	37.276	Meleagris_gallopavo
ENSCING00000022762	-	99	35.347	ENSMICG00000030789	ALKBH1	84	35.347	Microcebus_murinus
ENSCING00000022762	-	99	34.545	ENSMOCG00000005374	Alkbh1	83	34.545	Microtus_ochrogaster
ENSCING00000022762	-	99	34.286	ENSMMOG00000018265	alkbh1	86	33.442	Mola_mola
ENSCING00000022762	-	99	34.545	ENSMODG00000005263	ALKBH1	85	34.545	Monodelphis_domestica
ENSCING00000022762	-	99	34.810	ENSMALG00000012608	alkbh1	84	34.810	Monopterus_albus
ENSCING00000022762	-	99	35.474	ENSMUSG00000079036	Alkbh1	98	40.000	Mus_musculus
ENSCING00000022762	-	99	35.168	MGP_PahariEiJ_G0029753	Alkbh1	98	40.000	Mus_pahari
ENSCING00000022762	-	99	35.474	MGP_SPRETEiJ_G0018839	Alkbh1	98	40.000	Mus_spretus
ENSCING00000022762	-	88	37.818	ENSMPUG00000008742	ALKBH1	69	37.818	Mustela_putorius_furo
ENSCING00000022762	-	99	35.152	ENSMLUG00000005220	ALKBH1	83	35.152	Myotis_lucifugus
ENSCING00000022762	-	99	34.056	ENSNGAG00000006997	Alkbh1	83	34.056	Nannospalax_galili
ENSCING00000022762	-	56	42.222	ENSNLEG00000016766	ALKBH1	54	42.222	Nomascus_leucogenys
ENSCING00000022762	-	76	36.614	ENSMEUG00000015005	ALKBH1	66	36.614	Notamacropus_eugenii
ENSCING00000022762	-	99	34.663	ENSOPRG00000007549	ALKBH1	83	34.663	Ochotona_princeps
ENSCING00000022762	-	99	33.333	ENSONIG00000011694	alkbh1	84	33.333	Oreochromis_niloticus
ENSCING00000022762	-	99	35.294	ENSOANG00000010841	ALKBH1	85	35.294	Ornithorhynchus_anatinus
ENSCING00000022762	-	99	34.356	ENSOCUG00000001438	ALKBH1	83	34.356	Oryctolagus_cuniculus
ENSCING00000022762	-	99	35.443	ENSORLG00000010750	alkbh1	84	35.443	Oryzias_latipes
ENSCING00000022762	-	99	35.443	ENSORLG00020022193	alkbh1	84	35.443	Oryzias_latipes_hni
ENSCING00000022762	-	99	35.599	ENSORLG00015020192	alkbh1	84	35.599	Oryzias_latipes_hsok
ENSCING00000022762	-	99	35.849	ENSOMEG00000019337	alkbh1	79	35.849	Oryzias_melastigma
ENSCING00000022762	-	99	35.562	ENSOGAG00000006929	ALKBH1	85	35.562	Otolemur_garnettii
ENSCING00000022762	-	99	33.945	ENSOARG00000002621	ALKBH1	84	33.945	Ovis_aries
ENSCING00000022762	-	99	35.185	ENSPPAG00000041592	ALKBH1	83	35.185	Pan_paniscus
ENSCING00000022762	-	99	35.077	ENSPPRG00000014697	ALKBH1	83	35.077	Panthera_pardus
ENSCING00000022762	-	99	35.077	ENSPTIG00000014206	ALKBH1	83	35.077	Panthera_tigris_altaica
ENSCING00000022762	-	99	35.185	ENSPTRG00000006586	ALKBH1	83	35.185	Pan_troglodytes
ENSCING00000022762	-	99	34.769	ENSPANG00000006979	ALKBH1	83	34.769	Papio_anubis
ENSCING00000022762	-	99	36.825	ENSPKIG00000014959	alkbh1	83	36.825	Paramormyrops_kingsleyae
ENSCING00000022762	-	82	38.321	ENSPSIG00000011527	ALKBH1	82	38.321	Pelodiscus_sinensis
ENSCING00000022762	-	99	34.483	ENSPMGG00000010538	alkbh1	91	34.483	Periophthalmus_magnuspinnatus
ENSCING00000022762	-	99	34.769	ENSPEMG00000022798	Alkbh1	82	34.769	Peromyscus_maniculatus_bairdii
ENSCING00000022762	-	99	35.474	ENSPCIG00000026843	ALKBH1	85	35.474	Phascolarctos_cinereus
ENSCING00000022762	-	99	33.856	ENSPFOG00000006775	alkbh1	83	33.856	Poecilia_formosa
ENSCING00000022762	-	99	33.856	ENSPLAG00000011128	alkbh1	83	33.856	Poecilia_latipinna
ENSCING00000022762	-	99	34.796	ENSPMEG00000019521	alkbh1	83	34.796	Poecilia_mexicana
ENSCING00000022762	-	99	34.483	ENSPREG00000011690	alkbh1	83	34.483	Poecilia_reticulata
ENSCING00000022762	-	99	35.494	ENSPPYG00000006029	ALKBH1	83	35.494	Pongo_abelii
ENSCING00000022762	-	99	34.877	ENSPCAG00000004251	ALKBH1	83	34.877	Procavia_capensis
ENSCING00000022762	-	99	34.650	ENSPCOG00000027372	ALKBH1	83	34.650	Propithecus_coquereli
ENSCING00000022762	-	99	34.043	ENSPVAG00000006418	ALKBH1	83	34.043	Pteropus_vampyrus
ENSCING00000022762	-	99	33.956	ENSPNYG00000003199	alkbh1	90	33.956	Pundamilia_nyererei
ENSCING00000022762	-	99	36.050	ENSPNAG00000008625	alkbh1	84	36.050	Pygocentrus_nattereri
ENSCING00000022762	-	50	30.070	ENSPNAG00000015253	-	60	30.070	Pygocentrus_nattereri
ENSCING00000022762	-	99	34.242	ENSRNOG00000012264	Alkbh1	83	34.242	Rattus_norvegicus
ENSCING00000022762	-	99	35.077	ENSRBIG00000026838	ALKBH1	83	35.077	Rhinopithecus_bieti
ENSCING00000022762	-	99	35.077	ENSRROG00000041777	ALKBH1	83	35.077	Rhinopithecus_roxellana
ENSCING00000022762	-	99	35.185	ENSSBOG00000014817	ALKBH1	83	35.185	Saimiri_boliviensis_boliviensis
ENSCING00000022762	-	99	36.061	ENSSHAG00000017615	ALKBH1	84	36.364	Sarcophilus_harrisii
ENSCING00000022762	-	99	37.188	ENSSFOG00015022204	alkbh1	83	37.188	Scleropages_formosus
ENSCING00000022762	-	99	34.936	ENSSMAG00000012912	alkbh1	83	34.936	Scophthalmus_maximus
ENSCING00000022762	-	99	35.312	ENSSDUG00000021889	alkbh1	83	35.312	Seriola_dumerili
ENSCING00000022762	-	99	35.000	ENSSLDG00000023125	alkbh1	83	35.000	Seriola_lalandi_dorsalis
ENSCING00000022762	-	76	37.945	ENSSARG00000006523	ALKBH1	64	37.945	Sorex_araneus
ENSCING00000022762	-	99	33.660	ENSSPUG00000009359	ALKBH1	84	33.660	Sphenodon_punctatus
ENSCING00000022762	-	99	34.727	ENSSPAG00000013486	alkbh1	83	34.727	Stegastes_partitus
ENSCING00000022762	-	99	33.131	ENSSSCG00000025906	ALKBH1	83	33.131	Sus_scrofa
ENSCING00000022762	-	99	34.603	ENSTGUG00000012335	ALKBH1	86	34.603	Taeniopygia_guttata
ENSCING00000022762	-	99	37.695	ENSTRUG00000022051	alkbh1	84	37.695	Takifugu_rubripes
ENSCING00000022762	-	99	35.423	ENSTNIG00000003557	alkbh1	85	35.423	Tetraodon_nigroviridis
ENSCING00000022762	-	99	34.650	ENSTBEG00000013830	ALKBH1	83	34.650	Tupaia_belangeri
ENSCING00000022762	-	99	35.347	ENSUAMG00000022446	ALKBH1	83	35.347	Ursus_americanus
ENSCING00000022762	-	99	35.347	ENSUMAG00000007173	ALKBH1	83	35.347	Ursus_maritimus
ENSCING00000022762	-	99	34.954	ENSVPAG00000001780	ALKBH1	84	34.954	Vicugna_pacos
ENSCING00000022762	-	88	38.489	ENSVVUG00000004431	ALKBH1	70	38.489	Vulpes_vulpes
ENSCING00000022762	-	99	33.016	ENSXETG00000011086	alkbh1	79	33.016	Xenopus_tropicalis
ENSCING00000022762	-	99	34.177	ENSXCOG00000009419	alkbh1	90	34.177	Xiphophorus_couchianus
ENSCING00000022762	-	99	34.796	ENSXMAG00000015656	alkbh1	83	34.796	Xiphophorus_maculatus