EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000022892 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4197 bases
Position: chr8:5382854-5387050
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000024217	RRM_1	PF00076.22	2.4e-20	1	2
ENSCINP00000024217	RRM_1	PF00076.22	2.4e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000024463	-	1275	-	ENSCINP00000024217	404 (aa)	-	F6ZH30

Gene Model

Click here to download ENSCING00000022892's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000022892's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000022892	-	71	33.916	ENSG00000116754	SRSF11	66	53.571	Homo_sapiens
ENSCING00000022892	-	71	51.736	ENSG00000153914	SREK1	81	55.556	Homo_sapiens
ENSCING00000022892	-	70	31.673	ENSAPOG00000004488	-	78	53.571	Acanthochromis_polyacanthus
ENSCING00000022892	-	71	51.736	ENSAMEG00000011327	SREK1	53	39.298	Ailuropoda_melanoleuca
ENSCING00000022892	-	70	32.028	ENSAPEG00000003619	SRSF11	78	53.571	Amphiprion_percula
ENSCING00000022892	-	70	31.359	ENSAPEG00000003142	SRSF11	86	50.602	Amphiprion_percula
ENSCING00000022892	-	70	31.673	ENSATEG00000007534	-	78	53.571	Anabas_testudineus
ENSCING00000022892	-	70	31.250	ENSATEG00000011691	srsf11	77	50.602	Anabas_testudineus
ENSCING00000022892	-	96	42.967	ENSAPLG00000003948	-	70	48.944	Anas_platyrhynchos
ENSCING00000022892	-	71	51.736	ENSANAG00000031358	SREK1	87	56.725	Aotus_nancymaae
ENSCING00000022892	-	69	47.917	ENSACLG00000026754	srek1	94	47.735	Astatotilapia_calliptera
ENSCING00000022892	-	70	49.653	ENSAMXG00000043877	srek1	57	48.780	Astyanax_mexicanus
ENSCING00000022892	-	71	51.736	ENSBTAG00000007321	SREK1	81	55.556	Bos_taurus
ENSCING00000022892	-	71	51.736	ENSCJAG00000015950	SREK1	87	56.725	Callithrix_jacchus
ENSCING00000022892	-	70	34.397	ENSCJAG00000017704	SRSF11	50	33.803	Callithrix_jacchus
ENSCING00000022892	-	71	51.736	ENSCAFG00000007560	SREK1	60	35.061	Canis_familiaris
ENSCING00000022892	-	73	33.550	ENSCHIG00000025295	SRSF11	69	54.321	Capra_hircus
ENSCING00000022892	-	71	51.389	ENSTSYG00000036957	SREK1	81	55.556	Carlito_syrichta
ENSCING00000022892	-	71	31.818	ENSTSYG00000033270	-	58	52.439	Carlito_syrichta
ENSCING00000022892	-	71	51.027	ENSCPOG00000008925	SREK1	65	42.466	Cavia_porcellus
ENSCING00000022892	-	71	51.736	ENSCCAG00000020591	SREK1	81	55.556	Cebus_capucinus
ENSCING00000022892	-	71	51.736	ENSCATG00000031482	SREK1	87	56.725	Cercocebus_atys
ENSCING00000022892	-	72	50.342	ENSCPBG00000026866	SREK1	85	51.056	Chrysemys_picta_bellii
ENSCING00000022892	-	71	51.736	ENSCANG00000030421	SREK1	87	56.725	Colobus_angolensis_palliatus
ENSCING00000022892	-	70	47.719	ENSDARG00000009764	srek1	55	47.719	Danio_rerio
ENSCING00000022892	-	70	36.644	FBgn0024285	Srp54	52	36.458	Drosophila_melanogaster
ENSCING00000022892	-	73	33.898	ENSEASG00005007847	SRSF11	71	54.321	Equus_asinus_asinus
ENSCING00000022892	-	71	43.910	ENSELUG00000008230	srek1	53	48.123	Esox_lucius
ENSCING00000022892	-	59	48.536	ENSGALG00000043541	SREK1	94	48.536	Gallus_gallus
ENSCING00000022892	-	99	43.532	ENSGAGG00000006087	SREK1	67	51.056	Gopherus_agassizii
ENSCING00000022892	-	71	51.736	ENSGGOG00000004737	SREK1	87	56.725	Gorilla_gorilla
ENSCING00000022892	-	94	46.512	ENSIPUG00000016851	srek1	54	49.829	Ictalurus_punctatus
ENSCING00000022892	-	71	50.859	ENSSTOG00000008850	SREK1	84	53.571	Ictidomys_tridecemlineatus
ENSCING00000022892	-	70	30.662	ENSLBEG00000024167	srsf11	85	50.602	Labrus_bergylta
ENSCING00000022892	-	71	51.027	ENSLAFG00000013853	SREK1	59	39.437	Loxodonta_africana
ENSCING00000022892	-	71	51.736	ENSMFAG00000039823	SREK1	87	56.725	Macaca_fascicularis
ENSCING00000022892	-	95	43.577	ENSMMUG00000014586	SREK1	78	54.118	Macaca_mulatta
ENSCING00000022892	-	71	51.736	ENSMNEG00000030723	SREK1	87	56.725	Macaca_nemestrina
ENSCING00000022892	-	71	51.736	ENSMLEG00000039078	SREK1	87	56.725	Mandrillus_leucophaeus
ENSCING00000022892	-	70	32.028	ENSMAMG00000015002	-	79	53.571	Mastacembelus_armatus
ENSCING00000022892	-	71	51.736	ENSMICG00000034959	SREK1	87	56.725	Microcebus_murinus
ENSCING00000022892	-	69	31.295	ENSMMOG00000016751	-	78	53.571	Mola_mola
ENSCING00000022892	-	70	48.057	ENSMALG00000017086	srek1	88	56.410	Monopterus_albus
ENSCING00000022892	-	71	33.217	MGP_CAROLIEiJ_G0025767	Srsf11	92	50.000	Mus_caroli
ENSCING00000022892	-	71	32.867	ENSMUSG00000055436	Srsf11	91	50.000	Mus_musculus
ENSCING00000022892	-	71	33.217	MGP_PahariEiJ_G0027217	Srsf11	92	50.000	Mus_pahari
ENSCING00000022892	-	71	32.867	MGP_SPRETEiJ_G0026719	Srsf11	92	50.000	Mus_spretus
ENSCING00000022892	-	71	51.736	ENSNLEG00000003827	SREK1	81	55.556	Nomascus_leucogenys
ENSCING00000022892	-	71	51.042	ENSOPRG00000012111	SREK1	51	52.632	Ochotona_princeps
ENSCING00000022892	-	70	48.951	ENSONIG00000011080	srek1	65	48.264	Oreochromis_niloticus
ENSCING00000022892	-	60	52.823	ENSOANG00000005029	SREK1	52	53.719	Ornithorhynchus_anatinus
ENSCING00000022892	-	70	33.096	ENSORLG00020009393	-	75	53.571	Oryzias_latipes_hni
ENSCING00000022892	-	70	33.096	ENSORLG00015009374	-	75	53.571	Oryzias_latipes_hsok
ENSCING00000022892	-	70	39.510	ENSOMEG00000015817	srek1	56	39.249	Oryzias_melastigma
ENSCING00000022892	-	70	52.482	ENSPPAG00000031605	SREK1	87	56.725	Pan_paniscus
ENSCING00000022892	-	71	51.389	ENSPPRG00000024617	SREK1	81	54.321	Panthera_pardus
ENSCING00000022892	-	71	51.389	ENSPTIG00000006608	SREK1	81	54.321	Panthera_tigris_altaica
ENSCING00000022892	-	71	51.736	ENSPTRG00000016936	SREK1	87	56.725	Pan_troglodytes
ENSCING00000022892	-	71	51.736	ENSPANG00000008953	SREK1	87	56.725	Papio_anubis
ENSCING00000022892	-	72	47.475	ENSPKIG00000025563	srek1	53	48.264	Paramormyrops_kingsleyae
ENSCING00000022892	-	71	51.736	ENSPCOG00000026230	SREK1	87	56.725	Propithecus_coquereli
ENSCING00000022892	-	98	39.957	ENSPNAG00000004328	srek1	57	50.000	Pygocentrus_nattereri
ENSCING00000022892	-	71	33.916	ENSRBIG00000042971	SRSF11	77	47.170	Rhinopithecus_bieti
ENSCING00000022892	-	71	51.736	ENSRBIG00000033818	SREK1	81	55.556	Rhinopithecus_bieti
ENSCING00000022892	-	71	51.736	ENSRROG00000017210	SREK1	87	56.725	Rhinopithecus_roxellana
ENSCING00000022892	-	71	51.736	ENSSBOG00000031230	SREK1	87	56.725	Saimiri_boliviensis_boliviensis
ENSCING00000022892	-	71	33.916	ENSSBOG00000033461	SRSF11	77	47.170	Saimiri_boliviensis_boliviensis
ENSCING00000022892	-	69	48.276	ENSSFOG00015004995	srek1	52	48.276	Scleropages_formosus
ENSCING00000022892	-	92	40.534	ENSSMAG00000011808	srek1	58	47.222	Scophthalmus_maximus
ENSCING00000022892	-	70	33.452	ENSSLDG00000012105	-	78	53.571	Seriola_lalandi_dorsalis
ENSCING00000022892	-	70	49.823	ENSSPUG00000016553	SREK1	90	49.823	Sphenodon_punctatus
ENSCING00000022892	-	70	32.028	ENSSPAG00000016483	-	69	53.488	Stegastes_partitus
ENSCING00000022892	-	98	43.890	ENSTNIG00000013463	srek1	81	43.750	Tetraodon_nigroviridis
ENSCING00000022892	-	70	46.230	ENSXETG00000021460	srek1	60	47.869	Xenopus_tropicalis