EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000022947 (Gene tree)
Gene ID: 100184042
Gene Symbol: -
Alias: -
Full Name: U3 small nucleolar RNA-associated protein 6 homolog
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 4150 bases
Position: chr11:4526752-4530901
Accession: 100184042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000035636	U3_assoc_6	PF08640.11	2.9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000033512	-	1934	XM_002125446	ENSCINP00000035636	611 (aa)	XP_002125482	H2Y152

Gene Model

Click here to download ENSCING00000022947's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000022947's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000022947	-	99	32.680	ENSG00000108651	UTP6	99	32.680	Homo_sapiens
ENSCING00000022947	-	99	32.626	ENSAPOG00000000435	utp6	99	32.626	Acanthochromis_polyacanthus
ENSCING00000022947	-	99	31.922	ENSAMEG00000005443	UTP6	99	31.922	Ailuropoda_melanoleuca
ENSCING00000022947	-	99	30.179	ENSACIG00000004124	utp6	99	30.179	Amphilophus_citrinellus
ENSCING00000022947	-	99	32.300	ENSAOCG00000016812	utp6	99	32.300	Amphiprion_ocellaris
ENSCING00000022947	-	99	32.463	ENSAPEG00000023565	utp6	99	32.463	Amphiprion_percula
ENSCING00000022947	-	99	32.348	ENSATEG00000003401	utp6	99	32.348	Anabas_testudineus
ENSCING00000022947	-	97	30.667	ENSAPLG00000005821	UTP6	96	30.964	Anas_platyrhynchos
ENSCING00000022947	-	99	32.079	ENSACAG00000009472	UTP6	99	32.079	Anolis_carolinensis
ENSCING00000022947	-	99	31.382	ENSANAG00000034603	UTP6	99	31.382	Aotus_nancymaae
ENSCING00000022947	-	99	32.300	ENSACLG00000006728	utp6	99	32.300	Astatotilapia_calliptera
ENSCING00000022947	-	99	30.542	ENSAMXG00000009478	utp6	99	30.542	Astyanax_mexicanus
ENSCING00000022947	-	99	30.844	ENSBTAG00000015612	UTP6	99	30.844	Bos_taurus
ENSCING00000022947	-	99	31.863	ENSCJAG00000014115	UTP6	99	31.863	Callithrix_jacchus
ENSCING00000022947	-	99	32.733	ENSCAFG00000018507	UTP6	99	32.733	Canis_familiaris
ENSCING00000022947	-	99	32.733	ENSCAFG00020014678	UTP6	99	32.733	Canis_lupus_dingo
ENSCING00000022947	-	99	30.782	ENSCHIG00000009726	-	99	30.782	Capra_hircus
ENSCING00000022947	-	99	30.945	ENSCHIG00000017954	-	99	30.945	Capra_hircus
ENSCING00000022947	-	99	30.669	ENSTSYG00000002202	UTP6	99	30.669	Carlito_syrichta
ENSCING00000022947	-	99	32.085	ENSCPOG00000014294	UTP6	99	32.085	Cavia_porcellus
ENSCING00000022947	-	99	32.790	ENSCATG00000034868	UTP6	99	32.790	Cercocebus_atys
ENSCING00000022947	-	99	32.733	ENSCLAG00000007274	UTP6	99	32.733	Chinchilla_lanigera
ENSCING00000022947	-	99	32.790	ENSCSAG00000006595	UTP6	99	32.790	Chlorocebus_sabaeus
ENSCING00000022947	-	62	36.522	ENSCHOG00000010940	-	61	36.190	Choloepus_hoffmanni
ENSCING00000022947	-	99	34.043	ENSCPBG00000004652	UTP6	99	34.043	Chrysemys_picta_bellii
ENSCING00000022947	-	53	69.231	ENSCSAVG00000011416	-	99	69.231	Ciona_savignyi
ENSCING00000022947	-	99	31.553	ENSCGRG00001000046	Utp6	99	31.553	Cricetulus_griseus_chok1gshd
ENSCING00000022947	-	93	30.664	ENSCGRG00000011543	Utp6	99	30.664	Cricetulus_griseus_crigri
ENSCING00000022947	-	99	30.229	ENSCSEG00000013422	utp6	99	30.343	Cynoglossus_semilaevis
ENSCING00000022947	-	99	32.195	ENSCVAG00000020322	utp6	99	32.195	Cyprinodon_variegatus
ENSCING00000022947	-	99	30.706	ENSDARG00000098433	utp6	100	45.856	Danio_rerio
ENSCING00000022947	-	99	32.463	ENSDNOG00000037018	UTP6	99	32.463	Dasypus_novemcinctus
ENSCING00000022947	-	91	31.162	ENSDORG00000003843	Utp6	99	30.973	Dipodomys_ordii
ENSCING00000022947	-	99	32.953	ENSEASG00005010870	UTP6	99	32.953	Equus_asinus_asinus
ENSCING00000022947	-	99	33.063	ENSECAG00000022217	UTP6	99	33.063	Equus_caballus
ENSCING00000022947	-	99	31.199	ENSELUG00000006618	utp6	99	31.199	Esox_lucius
ENSCING00000022947	-	99	31.475	ENSFCAG00000015795	UTP6	99	31.475	Felis_catus
ENSCING00000022947	-	99	32.680	ENSFALG00000002282	UTP6	99	32.680	Ficedula_albicollis
ENSCING00000022947	-	99	31.759	ENSFDAG00000019506	UTP6	99	31.759	Fukomys_damarensis
ENSCING00000022947	-	99	31.158	ENSFHEG00000010373	utp6	99	31.158	Fundulus_heteroclitus
ENSCING00000022947	-	99	32.085	ENSGMOG00000011958	utp6	99	32.085	Gadus_morhua
ENSCING00000022947	-	99	32.190	ENSGALG00000003260	UTP6	99	32.190	Gallus_gallus
ENSCING00000022947	-	99	31.382	ENSGAFG00000008505	utp6	99	31.382	Gambusia_affinis
ENSCING00000022947	-	99	31.870	ENSGACG00000019424	utp6	99	31.870	Gasterosteus_aculeatus
ENSCING00000022947	-	99	33.879	ENSGAGG00000004820	UTP6	99	33.879	Gopherus_agassizii
ENSCING00000022947	-	99	32.843	ENSGGOG00000013569	UTP6	99	32.843	Gorilla_gorilla
ENSCING00000022947	-	99	32.300	ENSHBUG00000018668	utp6	99	32.300	Haplochromis_burtoni
ENSCING00000022947	-	99	31.107	ENSHGLG00000010332	UTP6	99	31.107	Heterocephalus_glaber_female
ENSCING00000022947	-	99	30.894	ENSHCOG00000017277	utp6	99	30.894	Hippocampus_comes
ENSCING00000022947	-	99	32.195	ENSSTOG00000015875	UTP6	99	32.195	Ictidomys_tridecemlineatus
ENSCING00000022947	-	99	31.321	ENSKMAG00000021631	utp6	99	31.321	Kryptolebias_marmoratus
ENSCING00000022947	-	99	31.803	ENSLBEG00000002115	utp6	99	31.639	Labrus_bergylta
ENSCING00000022947	-	99	34.421	ENSLACG00000017158	UTP6	99	34.421	Latimeria_chalumnae
ENSCING00000022947	-	91	31.673	ENSLOCG00000013797	utp6	91	31.673	Lepisosteus_oculatus
ENSCING00000022947	-	99	31.826	ENSLAFG00000013008	UTP6	99	31.826	Loxodonta_africana
ENSCING00000022947	-	99	32.790	ENSMFAG00000038842	UTP6	99	32.790	Macaca_fascicularis
ENSCING00000022947	-	63	33.740	ENSMFAG00000041904	-	72	33.190	Macaca_fascicularis
ENSCING00000022947	-	99	32.790	ENSMMUG00000020403	UTP6	99	32.790	Macaca_mulatta
ENSCING00000022947	-	99	32.790	ENSMNEG00000039480	UTP6	99	32.790	Macaca_nemestrina
ENSCING00000022947	-	54	30.931	ENSMLEG00000039364	-	52	30.408	Mandrillus_leucophaeus
ENSCING00000022947	-	88	33.842	ENSMLEG00000032174	UTP6	99	33.842	Mandrillus_leucophaeus
ENSCING00000022947	-	99	32.953	ENSMAMG00000002228	utp6	99	32.953	Mastacembelus_armatus
ENSCING00000022947	-	99	32.300	ENSMZEG00005023895	utp6	99	32.300	Maylandia_zebra
ENSCING00000022947	-	94	31.100	ENSMGAG00000008111	UTP6	99	31.100	Meleagris_gallopavo
ENSCING00000022947	-	99	32.033	ENSMAUG00000021895	Utp6	99	32.033	Mesocricetus_auratus
ENSCING00000022947	-	99	31.485	ENSMICG00000002632	UTP6	99	31.485	Microcebus_murinus
ENSCING00000022947	-	99	32.195	ENSMOCG00000014163	Utp6	99	32.195	Microtus_ochrogaster
ENSCING00000022947	-	99	31.922	ENSMMOG00000008653	utp6	99	31.922	Mola_mola
ENSCING00000022947	-	99	32.795	ENSMODG00000019206	UTP6	99	32.577	Monodelphis_domestica
ENSCING00000022947	-	99	31.648	ENSMALG00000021112	utp6	99	31.648	Monopterus_albus
ENSCING00000022947	-	99	31.877	MGP_CAROLIEiJ_G0016828	Utp6	99	31.877	Mus_caroli
ENSCING00000022947	-	99	31.715	ENSMUSG00000035575	Utp6	99	31.715	Mus_musculus
ENSCING00000022947	-	88	37.209	MGP_PahariEiJ_G0017965	Utp6	99	37.209	Mus_pahari
ENSCING00000022947	-	99	32.358	MGP_SPRETEiJ_G0017672	Utp6	99	32.358	Mus_spretus
ENSCING00000022947	-	99	32.566	ENSMPUG00000014581	UTP6	99	32.566	Mustela_putorius_furo
ENSCING00000022947	-	99	31.870	ENSMLUG00000016422	UTP6	99	31.870	Myotis_lucifugus
ENSCING00000022947	-	99	33.007	ENSNGAG00000015482	Utp6	99	33.007	Nannospalax_galili
ENSCING00000022947	-	99	31.974	ENSNBRG00000019714	utp6	99	31.974	Neolamprologus_brichardi
ENSCING00000022947	-	99	32.516	ENSNLEG00000011009	UTP6	99	32.516	Nomascus_leucogenys
ENSCING00000022947	-	86	38.298	ENSOPRG00000008446	-	87	38.298	Ochotona_princeps
ENSCING00000022947	-	99	31.811	ENSONIG00000018090	utp6	99	31.811	Oreochromis_niloticus
ENSCING00000022947	-	95	31.219	ENSOANG00000004279	UTP6	96	31.219	Ornithorhynchus_anatinus
ENSCING00000022947	-	99	32.739	ENSOCUG00000016980	UTP6	99	32.739	Oryctolagus_cuniculus
ENSCING00000022947	-	99	32.626	ENSORLG00000003546	utp6	64	32.626	Oryzias_latipes
ENSCING00000022947	-	99	32.626	ENSORLG00020010377	utp6	99	32.626	Oryzias_latipes_hni
ENSCING00000022947	-	99	32.736	ENSORLG00015008893	utp6	99	32.736	Oryzias_latipes_hsok
ENSCING00000022947	-	99	30.995	ENSOMEG00000017487	utp6	99	30.995	Oryzias_melastigma
ENSCING00000022947	-	99	30.945	ENSOARG00000013474	UTP6	99	30.945	Ovis_aries
ENSCING00000022947	-	99	32.843	ENSPPAG00000038089	UTP6	99	32.843	Pan_paniscus
ENSCING00000022947	-	99	33.063	ENSPPRG00000001010	UTP6	99	33.063	Panthera_pardus
ENSCING00000022947	-	99	32.953	ENSPTIG00000013913	UTP6	99	32.953	Panthera_tigris_altaica
ENSCING00000022947	-	99	32.843	ENSPTRG00000008977	UTP6	99	32.843	Pan_troglodytes
ENSCING00000022947	-	54	30.030	ENSPANG00000034274	-	52	30.094	Papio_anubis
ENSCING00000022947	-	99	32.410	ENSPANG00000023113	UTP6	99	32.410	Papio_anubis
ENSCING00000022947	-	99	31.220	ENSPKIG00000004653	utp6	99	31.220	Paramormyrops_kingsleyae
ENSCING00000022947	-	99	34.258	ENSPSIG00000012435	UTP6	99	34.258	Pelodiscus_sinensis
ENSCING00000022947	-	99	32.790	ENSPMGG00000009548	utp6	99	32.790	Periophthalmus_magnuspinnatus
ENSCING00000022947	-	99	31.605	ENSPEMG00000014081	Utp6	99	31.605	Peromyscus_maniculatus_bairdii
ENSCING00000022947	-	99	32.573	ENSPCIG00000029968	UTP6	86	32.573	Phascolarctos_cinereus
ENSCING00000022947	-	99	31.442	ENSPFOG00000013918	utp6	99	31.442	Poecilia_formosa
ENSCING00000022947	-	99	31.767	ENSPLAG00000017825	utp6	99	31.767	Poecilia_latipinna
ENSCING00000022947	-	99	31.442	ENSPMEG00000008133	utp6	99	31.442	Poecilia_mexicana
ENSCING00000022947	-	99	31.220	ENSPREG00000013108	utp6	98	31.220	Poecilia_reticulata
ENSCING00000022947	-	99	31.699	ENSPPYG00000008154	UTP6	99	31.699	Pongo_abelii
ENSCING00000022947	-	99	31.974	ENSPCOG00000010224	UTP6	99	31.974	Propithecus_coquereli
ENSCING00000022947	-	99	30.744	ENSPVAG00000015759	UTP6	99	30.744	Pteropus_vampyrus
ENSCING00000022947	-	99	32.300	ENSPNYG00000002290	utp6	99	32.300	Pundamilia_nyererei
ENSCING00000022947	-	99	32.033	ENSRNOG00000014209	Utp6	99	32.033	Rattus_norvegicus
ENSCING00000022947	-	99	32.300	ENSRBIG00000020822	UTP6	99	32.300	Rhinopithecus_bieti
ENSCING00000022947	-	99	32.300	ENSRROG00000036838	UTP6	99	32.300	Rhinopithecus_roxellana
ENSCING00000022947	-	99	32.358	ENSSFOG00015005978	utp6	99	32.358	Scleropages_formosus
ENSCING00000022947	-	99	31.158	ENSSMAG00000014772	utp6	99	30.984	Scophthalmus_maximus
ENSCING00000022947	-	99	31.803	ENSSDUG00000000329	utp6	99	31.803	Seriola_dumerili
ENSCING00000022947	-	99	31.803	ENSSLDG00000016724	utp6	99	31.803	Seriola_lalandi_dorsalis
ENSCING00000022947	-	65	34.729	ENSSARG00000010778	UTP6	66	34.729	Sorex_araneus
ENSCING00000022947	-	99	33.660	ENSSPUG00000005273	UTP6	99	33.660	Sphenodon_punctatus
ENSCING00000022947	-	99	31.648	ENSSPAG00000011871	utp6	99	31.648	Stegastes_partitus
ENSCING00000022947	-	99	32.201	ENSSSCG00000017745	UTP6	98	36.693	Sus_scrofa
ENSCING00000022947	-	99	32.353	ENSTGUG00000004999	UTP6	99	32.353	Taeniopygia_guttata
ENSCING00000022947	-	99	30.782	ENSTRUG00000012005	utp6	99	30.782	Takifugu_rubripes
ENSCING00000022947	-	99	30.456	ENSTNIG00000003235	utp6	99	30.556	Tetraodon_nigroviridis
ENSCING00000022947	-	99	31.818	ENSTTRG00000009911	UTP6	99	31.818	Tursiops_truncatus
ENSCING00000022947	-	99	32.248	ENSUMAG00000015139	UTP6	99	32.248	Ursus_maritimus
ENSCING00000022947	-	99	32.020	ENSVPAG00000005782	UTP6	99	32.020	Vicugna_pacos
ENSCING00000022947	-	99	32.790	ENSVVUG00000012238	UTP6	99	32.790	Vulpes_vulpes
ENSCING00000022947	-	99	31.767	ENSXCOG00000013626	utp6	99	31.767	Xiphophorus_couchianus
ENSCING00000022947	-	99	31.220	ENSXMAG00000017414	utp6	99	31.220	Xiphophorus_maculatus