EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000022958 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 2126 bases
Position: chr8:6229876-6232001
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000035439	RRM_1	PF00076.22	2.9e-31	1	2
ENSCINP00000035439	RRM_1	PF00076.22	2.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000034646	-	568	-	ENSCINP00000035439	173 (aa)	-	H2Y0K5

Gene Model

Click here to download ENSCING00000022958's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000022958's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000022958	-	99	48.045	ENSG00000071626	DAZAP1	50	45.349	Homo_sapiens
ENSCING00000022958	-	99	47.929	ENSACIG00000004322	dazap1	57	47.929	Amphilophus_citrinellus
ENSCING00000022958	-	99	48.555	ENSATEG00000016043	dazap1	55	48.555	Anabas_testudineus
ENSCING00000022958	-	99	48.235	ENSAPLG00000005606	DAZAP1	52	48.235	Anas_platyrhynchos
ENSCING00000022958	-	99	48.521	ENSACAG00000005366	-	100	48.521	Anolis_carolinensis
ENSCING00000022958	-	99	48.555	ENSACLG00000023187	dazap1	66	46.377	Astatotilapia_calliptera
ENSCING00000022958	-	99	47.778	ENSCJAG00000005609	DAZAP1	58	48.235	Callithrix_jacchus
ENSCING00000022958	-	99	47.778	ENSCAFG00000019528	DAZAP1	63	48.148	Canis_familiaris
ENSCING00000022958	-	98	48.235	ENSTSYG00000027054	DAZAP1	50	48.235	Carlito_syrichta
ENSCING00000022958	-	99	48.045	ENSCPOG00000020185	DAZAP1	99	48.045	Cavia_porcellus
ENSCING00000022958	-	98	48.521	ENSCLAG00000009221	DAZAP1	99	48.521	Chinchilla_lanigera
ENSCING00000022958	-	96	71.304	ENSCSAVG00000004457	-	96	71.304	Ciona_savignyi
ENSCING00000022958	-	99	48.045	ENSCGRG00001021763	Cirbp	51	48.045	Cricetulus_griseus_chok1gshd
ENSCING00000022958	-	98	48.824	ENSCGRG00000017446	Dazap1	51	48.235	Cricetulus_griseus_crigri
ENSCING00000022958	-	99	48.555	ENSCVAG00000018607	dazap1	60	48.555	Cyprinodon_variegatus
ENSCING00000022958	-	96	48.555	ENSDARG00000070846	dazap1	92	47.183	Danio_rerio
ENSCING00000022958	-	99	47.222	ENSETEG00000008636	DAZAP1	55	47.222	Echinops_telfairi
ENSCING00000022958	-	99	48.555	ENSELUG00000010286	dazap1	51	48.214	Esox_lucius
ENSCING00000022958	-	99	48.538	ENSFALG00000014010	DAZAP1	52	48.538	Ficedula_albicollis
ENSCING00000022958	-	99	48.555	ENSFHEG00000016786	dazap1	65	48.555	Fundulus_heteroclitus
ENSCING00000022958	-	99	48.333	ENSGMOG00000001142	dazap1	55	48.333	Gadus_morhua
ENSCING00000022958	-	99	48.571	ENSGALG00000015200	DAZAP1	57	48.571	Gallus_gallus
ENSCING00000022958	-	97	48.555	ENSGACG00000008259	dazap1	53	47.727	Gasterosteus_aculeatus
ENSCING00000022958	-	99	48.555	ENSHBUG00000014707	dazap1	51	47.929	Haplochromis_burtoni
ENSCING00000022958	-	99	47.778	ENSHGLG00000017518	DAZAP1	57	48.235	Heterocephalus_glaber_female
ENSCING00000022958	-	98	48.235	ENSHGLG00100002588	DAZAP1	57	48.235	Heterocephalus_glaber_male
ENSCING00000022958	-	99	47.929	ENSHCOG00000008541	dazap1	59	47.929	Hippocampus_comes
ENSCING00000022958	-	99	46.927	ENSIPUG00000006899	dazap1	52	47.337	Ictalurus_punctatus
ENSCING00000022958	-	99	48.555	ENSKMAG00000005673	dazap1	59	48.555	Kryptolebias_marmoratus
ENSCING00000022958	-	98	48.824	ENSMAUG00000012188	Dazap1	98	48.824	Mesocricetus_auratus
ENSCING00000022958	-	98	48.824	ENSMOCG00000016931	Dazap1	98	48.824	Microtus_ochrogaster
ENSCING00000022958	-	99	48.045	MGP_CAROLIEiJ_G0015574	Dazap1	98	48.824	Mus_caroli
ENSCING00000022958	-	99	48.045	ENSMUSG00000069565	Dazap1	98	48.824	Mus_musculus
ENSCING00000022958	-	99	48.045	MGP_PahariEiJ_G0030987	Dazap1	98	48.824	Mus_pahari
ENSCING00000022958	-	99	48.045	MGP_SPRETEiJ_G0016392	Dazap1	98	48.824	Mus_spretus
ENSCING00000022958	-	99	48.214	ENSNBRG00000004605	dazap1	51	48.214	Neolamprologus_brichardi
ENSCING00000022958	-	98	47.647	ENSOANG00000014632	DAZAP1	52	47.647	Ornithorhynchus_anatinus
ENSCING00000022958	-	99	48.555	ENSORLG00000008278	dazap1	59	48.555	Oryzias_latipes
ENSCING00000022958	-	99	48.555	ENSORLG00020015195	dazap1	63	48.555	Oryzias_latipes_hni
ENSCING00000022958	-	99	48.555	ENSORLG00015010671	dazap1	63	48.555	Oryzias_latipes_hsok
ENSCING00000022958	-	99	48.555	ENSOMEG00000003120	dazap1	62	48.555	Oryzias_melastigma
ENSCING00000022958	-	99	47.222	ENSPKIG00000007696	dazap1	51	46.203	Paramormyrops_kingsleyae
ENSCING00000022958	-	98	48.521	ENSPSIG00000002760	DAZAP1	53	48.521	Pelodiscus_sinensis
ENSCING00000022958	-	99	47.170	ENSPMGG00000020522	dazap1	58	47.170	Periophthalmus_magnuspinnatus
ENSCING00000022958	-	98	47.097	ENSPCAG00000006539	DAZAP1	71	47.097	Procavia_capensis
ENSCING00000022958	-	99	48.555	ENSPNYG00000017318	dazap1	51	47.929	Pundamilia_nyererei
ENSCING00000022958	-	98	47.977	ENSPNAG00000011639	dazap1	53	47.337	Pygocentrus_nattereri
ENSCING00000022958	-	98	48.235	ENSRBIG00000032485	DAZAP1	55	48.235	Rhinopithecus_bieti
ENSCING00000022958	-	98	48.235	ENSRROG00000037347	DAZAP1	55	48.235	Rhinopithecus_roxellana
ENSCING00000022958	-	99	47.222	ENSSFOG00015020338	dazap1	57	47.222	Scleropages_formosus
ENSCING00000022958	-	99	48.555	ENSSMAG00000021047	dazap1	52	45.087	Scophthalmus_maximus
ENSCING00000022958	-	99	48.276	ENSSPUG00000006680	DAZAP1	57	48.276	Sphenodon_punctatus
ENSCING00000022958	-	99	48.555	ENSSPAG00000002402	dazap1	51	47.929	Stegastes_partitus
ENSCING00000022958	-	99	48.235	ENSTGUG00000000869	-	53	48.235	Taeniopygia_guttata
ENSCING00000022958	-	63	44.444	ENSTGUG00000014159	-	100	44.444	Taeniopygia_guttata
ENSCING00000022958	-	98	48.235	ENSUMAG00000005845	DAZAP1	72	48.235	Ursus_maritimus
ENSCING00000022958	-	99	48.066	ENSXETG00000003704	dazap1	64	48.066	Xenopus_tropicalis