EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000023054 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 1191 bases
Position: chrHT001101.1:46740-47930
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000036496	zf-C2H2	PF00096.26	3.7e-21	1	3
ENSCINP00000036496	zf-C2H2	PF00096.26	3.7e-21	2	3
ENSCINP00000036496	zf-C2H2	PF00096.26	3.7e-21	3	3
ENSCINP00000036496	zf-met	PF12874.7	3.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031832	-	543	-	ENSCINP00000036496	181 (aa)	-	H2Y3L1

Gene Model

Click here to download ENSCING00000023054's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000023054's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000023054	-	97	39.506	ENSAPOG00000011470	-	65	30.220	Acanthochromis_polyacanthus
ENSCING00000023054	-	97	36.957	ENSAPOG00000005259	-	83	36.957	Acanthochromis_polyacanthus
ENSCING00000023054	-	97	30.645	ENSAPOG00000021980	-	94	30.645	Acanthochromis_polyacanthus
ENSCING00000023054	-	97	47.170	ENSAPOG00000022174	-	88	38.750	Acanthochromis_polyacanthus
ENSCING00000023054	-	97	38.462	ENSACIG00000009717	-	84	38.462	Amphilophus_citrinellus
ENSCING00000023054	-	97	33.043	ENSACIG00000023212	-	81	33.043	Amphilophus_citrinellus
ENSCING00000023054	-	98	32.203	ENSAOCG00000013978	-	92	32.203	Amphiprion_ocellaris
ENSCING00000023054	-	97	41.509	ENSAOCG00000007388	-	55	30.556	Amphiprion_ocellaris
ENSCING00000023054	-	98	32.203	ENSAPEG00000012217	-	55	32.203	Amphiprion_percula
ENSCING00000023054	-	97	47.170	ENSAPEG00000013550	-	93	46.154	Amphiprion_percula
ENSCING00000023054	-	97	36.364	ENSACAG00000015141	-	82	32.571	Anolis_carolinensis
ENSCING00000023054	-	97	35.897	ENSAMXG00000029059	-	62	35.897	Astyanax_mexicanus
ENSCING00000023054	-	97	34.615	ENSCSAVG00000006745	-	79	34.615	Ciona_savignyi
ENSCING00000023054	-	97	42.593	ENSCSAVG00000006608	-	98	42.593	Ciona_savignyi
ENSCING00000023054	-	97	46.552	ENSCSAVG00000006141	-	99	35.429	Ciona_savignyi
ENSCING00000023054	-	100	32.955	ENSCSAVG00000000690	-	99	31.250	Ciona_savignyi
ENSCING00000023054	-	99	35.000	ENSCSAVG00000006650	-	93	35.000	Ciona_savignyi
ENSCING00000023054	-	97	41.379	ENSCVAG00000002506	-	95	30.857	Cyprinodon_variegatus
ENSCING00000023054	-	96	30.909	ENSCVAG00000013048	-	59	34.524	Cyprinodon_variegatus
ENSCING00000023054	-	97	45.902	ENSCVAG00000018485	-	83	45.902	Cyprinodon_variegatus
ENSCING00000023054	-	97	33.143	ENSCVAG00000002500	-	97	33.143	Cyprinodon_variegatus
ENSCING00000023054	-	97	38.554	FBgn0020309	crol	56	33.898	Drosophila_melanogaster
ENSCING00000023054	-	97	42.000	ENSEBUG00000009220	-	76	42.000	Eptatretus_burgeri
ENSCING00000023054	-	100	32.571	ENSEBUG00000015456	-	90	32.571	Eptatretus_burgeri
ENSCING00000023054	-	97	30.286	ENSEBUG00000006233	-	60	30.286	Eptatretus_burgeri
ENSCING00000023054	-	98	42.553	ENSEBUG00000006811	-	81	42.553	Eptatretus_burgeri
ENSCING00000023054	-	97	32.911	ENSEBUG00000014284	-	95	32.911	Eptatretus_burgeri
ENSCING00000023054	-	97	34.848	ENSFHEG00000013792	-	67	33.889	Fundulus_heteroclitus
ENSCING00000023054	-	95	40.385	ENSFHEG00000021003	-	66	40.385	Fundulus_heteroclitus
ENSCING00000023054	-	95	33.766	ENSFHEG00000005993	-	71	33.766	Fundulus_heteroclitus
ENSCING00000023054	-	97	38.889	ENSFHEG00000016540	-	82	33.898	Fundulus_heteroclitus
ENSCING00000023054	-	97	30.857	ENSFHEG00000006765	-	52	30.857	Fundulus_heteroclitus
ENSCING00000023054	-	95	30.460	ENSFHEG00000017885	-	68	30.460	Fundulus_heteroclitus
ENSCING00000023054	-	98	30.168	ENSFHEG00000013625	-	73	30.168	Fundulus_heteroclitus
ENSCING00000023054	-	97	33.898	ENSFHEG00000013820	-	58	33.898	Fundulus_heteroclitus
ENSCING00000023054	-	97	30.899	ENSFHEG00000013803	-	71	30.899	Fundulus_heteroclitus
ENSCING00000023054	-	95	30.857	ENSFHEG00000005983	-	60	32.468	Fundulus_heteroclitus
ENSCING00000023054	-	97	30.636	ENSFHEG00000019704	-	99	30.636	Fundulus_heteroclitus
ENSCING00000023054	-	97	31.361	ENSFHEG00000013486	-	83	31.361	Fundulus_heteroclitus
ENSCING00000023054	-	97	33.143	ENSFHEG00000013302	-	75	33.143	Fundulus_heteroclitus
ENSCING00000023054	-	98	32.192	ENSFHEG00000015571	-	73	32.192	Fundulus_heteroclitus
ENSCING00000023054	-	97	32.955	ENSFHEG00000003405	-	71	32.955	Fundulus_heteroclitus
ENSCING00000023054	-	100	34.524	ENSGAFG00000003119	-	60	34.524	Gambusia_affinis
ENSCING00000023054	-	95	40.260	ENSGAFG00000011999	-	76	30.337	Gambusia_affinis
ENSCING00000023054	-	95	45.455	ENSGAFG00000000521	-	55	44.444	Gambusia_affinis
ENSCING00000023054	-	97	38.889	ENSGAFG00000014188	-	85	38.462	Gambusia_affinis
ENSCING00000023054	-	97	37.662	ENSHCOG00000008601	-	79	37.662	Hippocampus_comes
ENSCING00000023054	-	99	30.857	ENSHCOG00000020972	-	93	30.857	Hippocampus_comes
ENSCING00000023054	-	100	34.615	ENSIPUG00000019205	-	56	34.615	Ictalurus_punctatus
ENSCING00000023054	-	97	30.233	ENSKMAG00000008316	-	85	30.233	Kryptolebias_marmoratus
ENSCING00000023054	-	95	30.899	ENSKMAG00000020025	-	93	30.899	Kryptolebias_marmoratus
ENSCING00000023054	-	93	30.000	ENSLBEG00000027993	-	82	30.000	Labrus_bergylta
ENSCING00000023054	-	99	36.986	ENSLACG00000017381	-	79	32.000	Latimeria_chalumnae
ENSCING00000023054	-	97	37.662	ENSLOCG00000016466	-	93	32.000	Lepisosteus_oculatus
ENSCING00000023054	-	97	32.948	ENSLAFG00000007752	-	98	32.948	Loxodonta_africana
ENSCING00000023054	-	97	40.741	ENSMAMG00000000789	-	59	40.741	Mastacembelus_armatus
ENSCING00000023054	-	97	39.506	ENSMALG00000009834	-	69	32.990	Monopterus_albus
ENSCING00000023054	-	97	32.571	ENSNBRG00000024294	-	61	38.961	Neolamprologus_brichardi
ENSCING00000023054	-	98	36.364	ENSNBRG00000006757	-	50	39.437	Neolamprologus_brichardi
ENSCING00000023054	-	97	36.723	ENSONIG00000019044	-	98	36.723	Oreochromis_niloticus
ENSCING00000023054	-	100	31.410	ENSONIG00000018037	-	99	31.410	Oreochromis_niloticus
ENSCING00000023054	-	97	32.768	ENSONIG00000018045	-	99	32.768	Oreochromis_niloticus
ENSCING00000023054	-	97	33.333	ENSONIG00000018058	-	99	33.333	Oreochromis_niloticus
ENSCING00000023054	-	97	42.623	ENSORLG00000000253	-	99	31.579	Oryzias_latipes
ENSCING00000023054	-	99	32.000	ENSORLG00000000262	-	78	32.000	Oryzias_latipes
ENSCING00000023054	-	97	39.286	ENSORLG00000024399	-	90	32.308	Oryzias_latipes
ENSCING00000023054	-	99	45.455	ENSORLG00000027982	-	97	34.483	Oryzias_latipes
ENSCING00000023054	-	97	30.337	ENSORLG00000023497	-	58	30.337	Oryzias_latipes
ENSCING00000023054	-	97	39.683	ENSORLG00000030630	-	83	30.857	Oryzias_latipes
ENSCING00000023054	-	97	41.096	ENSORLG00000024652	-	95	32.961	Oryzias_latipes
ENSCING00000023054	-	97	37.879	ENSORLG00000029027	-	85	31.429	Oryzias_latipes
ENSCING00000023054	-	97	42.593	ENSORLG00000022699	-	81	42.593	Oryzias_latipes
ENSCING00000023054	-	97	41.509	ENSORLG00000026811	-	68	41.509	Oryzias_latipes
ENSCING00000023054	-	97	39.655	ENSORLG00000028567	-	78	39.655	Oryzias_latipes
ENSCING00000023054	-	97	31.638	ENSORLG00000026852	-	69	31.638	Oryzias_latipes
ENSCING00000023054	-	97	38.596	ENSORLG00000028323	-	94	37.500	Oryzias_latipes
ENSCING00000023054	-	97	38.182	ENSORLG00000027186	-	81	31.844	Oryzias_latipes
ENSCING00000023054	-	99	43.396	ENSORLG00000025717	-	80	43.636	Oryzias_latipes
ENSCING00000023054	-	97	41.558	ENSORLG00000027822	-	90	33.010	Oryzias_latipes
ENSCING00000023054	-	97	35.366	ENSORLG00000026520	-	82	35.366	Oryzias_latipes
ENSCING00000023054	-	98	43.396	ENSORLG00020010804	-	97	31.638	Oryzias_latipes_hni
ENSCING00000023054	-	97	43.860	ENSORLG00020009857	-	92	43.860	Oryzias_latipes_hni
ENSCING00000023054	-	97	40.845	ENSORLG00020011149	-	78	40.845	Oryzias_latipes_hni
ENSCING00000023054	-	97	43.103	ENSORLG00020008891	-	81	42.593	Oryzias_latipes_hni
ENSCING00000023054	-	99	43.333	ENSORLG00020009943	-	99	43.333	Oryzias_latipes_hni
ENSCING00000023054	-	100	35.789	ENSORLG00020010560	-	96	33.333	Oryzias_latipes_hni
ENSCING00000023054	-	97	40.000	ENSORLG00020011075	-	75	40.000	Oryzias_latipes_hni
ENSCING00000023054	-	97	42.000	ENSORLG00020017164	-	92	42.000	Oryzias_latipes_hni
ENSCING00000023054	-	97	40.984	ENSORLG00020010171	-	91	35.000	Oryzias_latipes_hni
ENSCING00000023054	-	97	37.805	ENSORLG00015012892	-	86	35.028	Oryzias_latipes_hsok
ENSCING00000023054	-	100	32.609	ENSORLG00015012776	-	96	32.022	Oryzias_latipes_hsok
ENSCING00000023054	-	97	44.828	ENSORLG00015007742	-	85	42.857	Oryzias_latipes_hsok
ENSCING00000023054	-	97	33.143	ENSORLG00015011509	-	88	33.143	Oryzias_latipes_hsok
ENSCING00000023054	-	97	32.203	ENSORLG00015019124	-	81	32.203	Oryzias_latipes_hsok
ENSCING00000023054	-	97	38.961	ENSORLG00015011917	-	80	34.545	Oryzias_latipes_hsok
ENSCING00000023054	-	97	40.000	ENSORLG00015013102	-	91	31.461	Oryzias_latipes_hsok
ENSCING00000023054	-	98	41.509	ENSORLG00015012339	-	92	31.818	Oryzias_latipes_hsok
ENSCING00000023054	-	97	33.143	ENSORLG00015007920	-	92	41.379	Oryzias_latipes_hsok
ENSCING00000023054	-	97	35.088	ENSORLG00015016558	-	82	30.508	Oryzias_latipes_hsok
ENSCING00000023054	-	97	36.471	ENSORLG00015013160	-	93	32.000	Oryzias_latipes_hsok
ENSCING00000023054	-	98	43.333	ENSORLG00015011730	-	93	43.333	Oryzias_latipes_hsok
ENSCING00000023054	-	97	41.818	ENSOMEG00000018735	-	89	41.818	Oryzias_melastigma
ENSCING00000023054	-	97	40.625	ENSOMEG00000016295	-	73	40.625	Oryzias_melastigma
ENSCING00000023054	-	97	32.203	ENSOMEG00000018562	-	94	32.203	Oryzias_melastigma
ENSCING00000023054	-	97	32.571	ENSOMEG00000006511	-	67	32.571	Oryzias_melastigma
ENSCING00000023054	-	98	40.000	ENSOMEG00000018691	-	94	38.961	Oryzias_melastigma
ENSCING00000023054	-	97	41.379	ENSOMEG00000008449	-	95	41.379	Oryzias_melastigma
ENSCING00000023054	-	97	32.812	ENSOMEG00000014882	-	77	32.812	Oryzias_melastigma
ENSCING00000023054	-	97	42.857	ENSOMEG00000011566	-	88	33.146	Oryzias_melastigma
ENSCING00000023054	-	97	43.636	ENSOMEG00000010638	-	91	38.462	Oryzias_melastigma
ENSCING00000023054	-	97	35.135	ENSOMEG00000004586	-	91	30.857	Oryzias_melastigma
ENSCING00000023054	-	97	41.270	ENSOMEG00000019379	-	87	30.682	Oryzias_melastigma
ENSCING00000023054	-	97	40.000	ENSOMEG00000000829	-	75	40.000	Oryzias_melastigma
ENSCING00000023054	-	97	42.857	ENSOMEG00000019519	-	79	48.780	Oryzias_melastigma
ENSCING00000023054	-	97	31.461	ENSOMEG00000000934	-	76	31.461	Oryzias_melastigma
ENSCING00000023054	-	99	33.143	ENSOMEG00000012263	-	78	33.140	Oryzias_melastigma
ENSCING00000023054	-	98	42.857	ENSOMEG00000014973	-	96	42.857	Oryzias_melastigma
ENSCING00000023054	-	97	39.344	ENSOMEG00000016779	-	74	39.344	Oryzias_melastigma
ENSCING00000023054	-	98	42.593	ENSOMEG00000003372	-	92	42.593	Oryzias_melastigma
ENSCING00000023054	-	97	40.000	ENSOMEG00000009816	-	100	34.118	Oryzias_melastigma
ENSCING00000023054	-	97	47.273	ENSOMEG00000019220	-	73	47.273	Oryzias_melastigma
ENSCING00000023054	-	97	41.509	ENSOMEG00000002622	-	66	41.509	Oryzias_melastigma
ENSCING00000023054	-	97	43.636	ENSOMEG00000016747	-	80	43.636	Oryzias_melastigma
ENSCING00000023054	-	97	41.818	ENSOMEG00000013868	-	71	41.818	Oryzias_melastigma
ENSCING00000023054	-	97	44.828	ENSOMEG00000021017	-	81	44.828	Oryzias_melastigma
ENSCING00000023054	-	97	40.260	ENSOMEG00000019336	-	69	40.260	Oryzias_melastigma
ENSCING00000023054	-	98	45.283	ENSOMEG00000002639	-	95	43.636	Oryzias_melastigma
ENSCING00000023054	-	97	41.818	ENSOMEG00000022322	-	72	41.818	Oryzias_melastigma
ENSCING00000023054	-	97	41.818	ENSOMEG00000012844	-	90	41.509	Oryzias_melastigma
ENSCING00000023054	-	97	43.333	ENSOMEG00000015103	-	92	30.508	Oryzias_melastigma
ENSCING00000023054	-	98	38.961	ENSOMEG00000009568	-	97	30.000	Oryzias_melastigma
ENSCING00000023054	-	97	44.444	ENSOMEG00000019179	-	90	44.444	Oryzias_melastigma
ENSCING00000023054	-	97	42.424	ENSOMEG00000013677	-	88	38.182	Oryzias_melastigma
ENSCING00000023054	-	97	44.444	ENSOMEG00000010371	-	95	37.662	Oryzias_melastigma
ENSCING00000023054	-	98	30.286	ENSOMEG00000020870	-	86	30.814	Oryzias_melastigma
ENSCING00000023054	-	97	37.975	ENSPMAG00000000401	-	86	37.975	Petromyzon_marinus
ENSCING00000023054	-	97	32.000	ENSPFOG00000001053	-	99	32.000	Poecilia_formosa
ENSCING00000023054	-	97	40.000	ENSPFOG00000006147	-	99	40.000	Poecilia_formosa
ENSCING00000023054	-	97	40.741	ENSPFOG00000018774	-	87	40.741	Poecilia_formosa
ENSCING00000023054	-	97	30.058	ENSPFOG00000007333	-	75	30.058	Poecilia_formosa
ENSCING00000023054	-	97	35.366	ENSPFOG00000021869	-	98	35.366	Poecilia_formosa
ENSCING00000023054	-	97	39.216	ENSPLAG00000008529	-	98	32.597	Poecilia_latipinna
ENSCING00000023054	-	97	32.571	ENSPLAG00000016372	-	91	32.571	Poecilia_latipinna
ENSCING00000023054	-	96	30.460	ENSPMEG00000001873	-	50	30.460	Poecilia_mexicana
ENSCING00000023054	-	78	37.179	ENSPMEG00000022716	-	57	37.179	Poecilia_mexicana
ENSCING00000023054	-	100	37.500	ENSPMEG00000022667	-	85	37.500	Poecilia_mexicana
ENSCING00000023054	-	97	30.460	ENSPMEG00000020833	-	78	30.460	Poecilia_mexicana
ENSCING00000023054	-	97	42.857	ENSPMEG00000022687	-	73	39.216	Poecilia_mexicana
ENSCING00000023054	-	98	31.461	ENSPREG00000013780	-	91	31.461	Poecilia_reticulata
ENSCING00000023054	-	97	42.857	ENSPREG00000014366	-	95	33.143	Poecilia_reticulata
ENSCING00000023054	-	96	30.460	ENSPREG00000000467	-	50	30.460	Poecilia_reticulata
ENSCING00000023054	-	100	35.429	ENSSFOG00015021831	-	53	35.429	Scleropages_formosus
ENSCING00000023054	-	97	40.741	ENSSDUG00000002488	-	57	40.741	Seriola_dumerili
ENSCING00000023054	-	97	40.741	ENSSLDG00000015116	-	57	40.741	Seriola_lalandi_dorsalis
ENSCING00000023054	-	97	36.842	ENSSPAG00000005690	-	61	36.842	Stegastes_partitus
ENSCING00000023054	-	98	42.857	ENSTNIG00000019069	-	99	42.857	Tetraodon_nigroviridis
ENSCING00000023054	-	97	38.182	ENSXCOG00000003530	-	82	38.182	Xiphophorus_couchianus
ENSCING00000023054	-	96	30.233	ENSXCOG00000012458	-	59	30.233	Xiphophorus_couchianus
ENSCING00000023054	-	97	31.056	ENSXCOG00000006951	-	67	31.056	Xiphophorus_couchianus
ENSCING00000023054	-	97	37.805	ENSXCOG00000009768	-	84	37.805	Xiphophorus_couchianus
ENSCING00000023054	-	96	36.364	ENSXCOG00000003493	-	61	36.364	Xiphophorus_couchianus
ENSCING00000023054	-	96	30.460	ENSXMAG00000029703	-	50	30.460	Xiphophorus_maculatus