EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000023247 (Gene tree)
Gene ID: 100180044
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Minus strand
Length: 7337 bases
Position: chr11:2609615-2616951
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000031396	KH_1	PF00013.29	6.2e-35	1	3
ENSCINP00000031396	KH_1	PF00013.29	6.2e-35	2	3
ENSCINP00000031396	KH_1	PF00013.29	6.2e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000030652	-	1662	-	ENSCINP00000031396	549 (aa)	-	H2XP13

Gene Model

Click here to download ENSCING00000023247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000023247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000023247	-	53	58.621	ENSAMEG00000000649	NOVA2	97	57.732	Ailuropoda_melanoleuca
ENSCING00000023247	-	72	52.313	ENSACAG00000003724	NOVA2	96	45.383	Anolis_carolinensis
ENSCING00000023247	-	53	58.621	ENSANAG00000022520	NOVA2	68	58.621	Aotus_nancymaae
ENSCING00000023247	-	50	59.783	ENSCPOG00000020582	NOVA2	68	59.783	Cavia_porcellus
ENSCING00000023247	-	65	60.227	ENSCSAG00000003105	NOVA2	90	42.829	Chlorocebus_sabaeus
ENSCING00000023247	-	72	51.957	ENSCPBG00000007153	NOVA2	89	45.200	Chrysemys_picta_bellii
ENSCING00000023247	-	90	91.734	ENSCSAVG00000009137	-	99	91.734	Ciona_savignyi
ENSCING00000023247	-	53	58.621	ENSDORG00000026568	Nova2	98	58.621	Dipodomys_ordii
ENSCING00000023247	-	65	58.889	ENSEBUG00000012405	NOVA2	96	43.615	Eptatretus_burgeri
ENSCING00000023247	-	66	58.889	ENSFCAG00000024784	NOVA2	93	43.907	Felis_catus
ENSCING00000023247	-	73	51.568	ENSGAGG00000009498	NOVA2	97	44.854	Gopherus_agassizii
ENSCING00000023247	-	67	57.732	ENSHGLG00000016103	NOVA2	83	57.732	Heterocephalus_glaber_female
ENSCING00000023247	-	55	59.783	ENSHGLG00100015153	NOVA2	97	59.783	Heterocephalus_glaber_male
ENSCING00000023247	-	50	48.797	ENSSTOG00000022126	NOVA2	99	43.454	Ictidomys_tridecemlineatus
ENSCING00000023247	-	60	58.621	ENSJJAG00000000944	Nova2	99	58.621	Jaculus_jaculus
ENSCING00000023247	-	53	57.732	ENSLAFG00000025917	NOVA2	99	44.055	Loxodonta_africana
ENSCING00000023247	-	66	57.732	ENSMFAG00000043672	NOVA2	70	57.732	Macaca_fascicularis
ENSCING00000023247	-	65	49.117	ENSMMUG00000004085	NOVA2	93	38.241	Macaca_mulatta
ENSCING00000023247	-	67	57.732	ENSMNEG00000040253	NOVA2	81	43.969	Macaca_nemestrina
ENSCING00000023247	-	53	58.621	ENSMLEG00000030389	NOVA2	93	57.732	Mandrillus_leucophaeus
ENSCING00000023247	-	67	57.732	ENSMAUG00000014038	Nova2	87	57.732	Mesocricetus_auratus
ENSCING00000023247	-	56	62.353	ENSMPUG00000005444	NOVA2	90	62.353	Mustela_putorius_furo
ENSCING00000023247	-	53	58.621	ENSNGAG00000014104	Nova2	84	57.732	Nannospalax_galili
ENSCING00000023247	-	64	61.176	ENSMEUG00000000562	NOVA2	83	39.872	Notamacropus_eugenii
ENSCING00000023247	-	54	58.416	ENSOPRG00000010051	NOVA2	64	58.416	Ochotona_princeps
ENSCING00000023247	-	67	57.732	ENSODEG00000008485	NOVA2	97	46.645	Octodon_degus
ENSCING00000023247	-	65	57.732	ENSOCUG00000022891	NOVA2	85	57.396	Oryctolagus_cuniculus
ENSCING00000023247	-	52	58.889	ENSPPAG00000035049	-	91	57.732	Pan_paniscus
ENSCING00000023247	-	51	58.621	ENSPTIG00000015368	NOVA2	62	58.621	Panthera_tigris_altaica
ENSCING00000023247	-	65	61.176	ENSPCIG00000007632	NOVA2	92	42.610	Phascolarctos_cinereus
ENSCING00000023247	-	54	57.732	ENSRROG00000037399	NOVA2	77	57.732	Rhinopithecus_roxellana
ENSCING00000023247	-	66	60.000	ENSSPUG00000002591	NOVA2	97	60.000	Sphenodon_punctatus
ENSCING00000023247	-	67	61.250	ENSTRUG00000019498	NOVA2	91	58.824	Takifugu_rubripes
ENSCING00000023247	-	67	57.732	ENSUAMG00000015647	NOVA2	93	44.633	Ursus_americanus
ENSCING00000023247	-	66	61.176	ENSXETG00000019101	nova2	80	61.176	Xenopus_tropicalis