EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCING00000023326 (Gene tree)
Gene ID: 100176986
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 8103 bases
Position: chr11:4026805-4034907
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000032868	MMR_HSR1	PF01926.23	2.5e-08	1	1
ENSCINP00000034151	MMR_HSR1	PF01926.23	2.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000030509	-	2335	-	ENSCINP00000032868	543 (aa)	-	H2XT84
ENSCINT00000035797	-	1694	-	ENSCINP00000034151	546 (aa)	-	H2XWW7

Gene Model

Click here to download ENSCING00000023326's gene model file

Pathways

Pathway ID	Pathway Name	Source
cin04144	Endocytosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000023326's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000023326	-	99	63.080	ENSG00000103966	EHD4	98	63.080	Homo_sapiens
ENSCING00000023326	-	99	64.325	ENSAPOG00000004967	ehd4	85	64.325	Acanthochromis_polyacanthus
ENSCING00000023326	-	99	63.265	ENSAMEG00000016343	EHD4	98	63.265	Ailuropoda_melanoleuca
ENSCING00000023326	-	99	64.695	ENSAPEG00000013326	ehd4	98	64.641	Amphiprion_percula
ENSCING00000023326	-	99	64.695	ENSATEG00000015573	ehd4	98	64.641	Anabas_testudineus
ENSCING00000023326	-	97	64.381	ENSAPLG00000008924	EHD4	93	62.868	Anas_platyrhynchos
ENSCING00000023326	-	99	62.615	ENSACAG00000014864	EHD4	98	62.615	Anolis_carolinensis
ENSCING00000023326	-	99	62.983	ENSANAG00000033562	EHD4	99	62.983	Aotus_nancymaae
ENSCING00000023326	-	99	65.065	ENSACLG00000017182	ehd4	98	65.009	Astatotilapia_calliptera
ENSCING00000023326	-	99	65.065	ENSAMXG00000008348	ehd4	98	65.009	Astyanax_mexicanus
ENSCING00000023326	-	99	63.100	ENSBTAG00000006792	EHD4	99	63.100	Bos_taurus
ENSCING00000023326	-	99	63.168	ENSCJAG00000020657	EHD4	99	63.168	Callithrix_jacchus
ENSCING00000023326	-	99	63.265	ENSCAFG00000009869	EHD4	99	62.915	Canis_familiaris
ENSCING00000023326	-	99	63.265	ENSCAFG00020004728	EHD4	99	62.915	Canis_lupus_dingo
ENSCING00000023326	-	99	63.284	ENSCHIG00000025291	EHD4	99	63.284	Capra_hircus
ENSCING00000023326	-	99	63.265	ENSTSYG00000028107	EHD4	98	63.265	Carlito_syrichta
ENSCING00000023326	-	99	63.168	ENSCCAG00000030886	EHD4	99	63.168	Cebus_capucinus
ENSCING00000023326	-	99	63.265	ENSCATG00000034221	EHD4	98	63.265	Cercocebus_atys
ENSCING00000023326	-	99	63.265	ENSCSAG00000008190	EHD4	98	63.265	Chlorocebus_sabaeus
ENSCING00000023326	-	96	62.049	ENSCPBG00000011098	EHD4	99	62.049	Chrysemys_picta_bellii
ENSCING00000023326	-	99	91.852	ENSCSAVG00000000028	-	99	91.513	Ciona_savignyi
ENSCING00000023326	-	99	63.636	ENSCGRG00001024863	Ehd4	98	63.636	Cricetulus_griseus_chok1gshd
ENSCING00000023326	-	95	65.377	ENSCGRG00000007631	Ehd4	99	65.125	Cricetulus_griseus_crigri
ENSCING00000023326	-	99	64.312	ENSCSEG00000011195	ehd4	78	64.140	Cynoglossus_semilaevis
ENSCING00000023326	-	99	65.065	ENSCVAG00000006962	ehd4	98	65.009	Cyprinodon_variegatus
ENSCING00000023326	-	99	65.250	ENSDARG00000054302	ehd4	87	65.250	Danio_rerio
ENSCING00000023326	-	99	63.822	ENSDNOG00000037551	EHD4	98	63.822	Dasypus_novemcinctus
ENSCING00000023326	-	99	63.636	ENSEASG00005015157	EHD4	99	63.636	Equus_asinus_asinus
ENSCING00000023326	-	99	63.636	ENSECAG00000017216	EHD4	99	63.636	Equus_caballus
ENSCING00000023326	-	99	63.451	ENSEEUG00000009114	EHD4	98	63.451	Erinaceus_europaeus
ENSCING00000023326	-	99	63.956	ENSELUG00000004390	ehd4	98	63.720	Esox_lucius
ENSCING00000023326	-	99	63.451	ENSFCAG00000040964	EHD4	98	63.451	Felis_catus
ENSCING00000023326	-	89	64.865	ENSFALG00000005954	EHD4	100	64.139	Ficedula_albicollis
ENSCING00000023326	-	89	64.865	ENSFDAG00000015044	EHD4	99	64.865	Fukomys_damarensis
ENSCING00000023326	-	97	65.143	ENSGALG00000008950	EHD4	99	63.603	Gallus_gallus
ENSCING00000023326	-	99	64.391	ENSGAFG00000007267	ehd4	99	64.391	Gambusia_affinis
ENSCING00000023326	-	100	61.525	ENSGAGG00000020474	EHD4	100	61.525	Gopherus_agassizii
ENSCING00000023326	-	99	63.080	ENSGGOG00000011817	EHD4	98	63.080	Gorilla_gorilla
ENSCING00000023326	-	99	65.065	ENSHBUG00000016153	ehd4	98	65.009	Haplochromis_burtoni
ENSCING00000023326	-	99	62.709	ENSHGLG00000016918	EHD4	98	62.709	Heterocephalus_glaber_female
ENSCING00000023326	-	99	64.510	ENSHCOG00000021219	ehd4	98	64.273	Hippocampus_comes
ENSCING00000023326	-	99	64.695	ENSIPUG00000018207	ehd4	98	64.641	Ictalurus_punctatus
ENSCING00000023326	-	99	63.265	ENSSTOG00000000719	EHD4	98	63.265	Ictidomys_tridecemlineatus
ENSCING00000023326	-	99	64.273	ENSLBEG00000020127	ehd4	98	64.273	Labrus_bergylta
ENSCING00000023326	-	100	64.051	ENSLACG00000017804	EHD4	91	64.781	Latimeria_chalumnae
ENSCING00000023326	-	99	64.510	ENSLOCG00000009774	ehd4	98	63.803	Lepisosteus_oculatus
ENSCING00000023326	-	99	63.265	ENSMFAG00000042599	EHD4	98	63.265	Macaca_fascicularis
ENSCING00000023326	-	99	63.265	ENSMMUG00000003846	EHD4	98	63.265	Macaca_mulatta
ENSCING00000023326	-	99	63.265	ENSMNEG00000031951	EHD4	98	63.265	Macaca_nemestrina
ENSCING00000023326	-	99	64.880	ENSMAMG00000000024	ehd4	98	64.825	Mastacembelus_armatus
ENSCING00000023326	-	99	65.065	ENSMZEG00005004542	-	98	65.009	Maylandia_zebra
ENSCING00000023326	-	99	65.065	ENSMZEG00005024022	ehd4	98	65.009	Maylandia_zebra
ENSCING00000023326	-	99	63.451	ENSMAUG00000020399	Ehd4	98	63.451	Mesocricetus_auratus
ENSCING00000023326	-	99	62.615	ENSMICG00000034027	EHD4	99	62.615	Microcebus_murinus
ENSCING00000023326	-	99	62.799	ENSMOCG00000010893	Ehd4	99	62.799	Microtus_ochrogaster
ENSCING00000023326	-	99	63.771	ENSMMOG00000013306	ehd4	98	63.720	Mola_mola
ENSCING00000023326	-	99	62.894	ENSMODG00000017946	EHD4	98	62.894	Monodelphis_domestica
ENSCING00000023326	-	99	64.140	ENSMALG00000005796	ehd4	98	64.088	Monopterus_albus
ENSCING00000023326	-	99	63.451	MGP_CAROLIEiJ_G0024161	Ehd4	98	63.451	Mus_caroli
ENSCING00000023326	-	99	63.451	ENSMUSG00000027293	Ehd4	98	63.451	Mus_musculus
ENSCING00000023326	-	99	63.265	MGP_PahariEiJ_G0025603	Ehd4	98	63.265	Mus_pahari
ENSCING00000023326	-	99	63.451	MGP_SPRETEiJ_G0025077	Ehd4	98	63.451	Mus_spretus
ENSCING00000023326	-	99	63.080	ENSMPUG00000009546	EHD4	98	63.080	Mustela_putorius_furo
ENSCING00000023326	-	99	63.080	ENSMLUG00000011689	EHD4	99	62.731	Myotis_lucifugus
ENSCING00000023326	-	99	63.451	ENSNGAG00000004194	Ehd4	98	63.451	Nannospalax_galili
ENSCING00000023326	-	99	64.510	ENSNBRG00000022623	ehd4	98	64.457	Neolamprologus_brichardi
ENSCING00000023326	-	68	68.120	ENSMEUG00000006980	EHD4	99	68.120	Notamacropus_eugenii
ENSCING00000023326	-	99	63.265	ENSODEG00000016665	EHD4	99	63.265	Octodon_degus
ENSCING00000023326	-	99	64.880	ENSONIG00000001849	ehd4	97	64.880	Oreochromis_niloticus
ENSCING00000023326	-	99	63.451	ENSOCUG00000015759	EHD4	98	63.451	Oryctolagus_cuniculus
ENSCING00000023326	-	99	64.325	ENSORLG00000010433	ehd4	98	64.273	Oryzias_latipes
ENSCING00000023326	-	99	64.325	ENSORLG00020001245	ehd4	98	64.273	Oryzias_latipes_hni
ENSCING00000023326	-	99	64.140	ENSORLG00015020872	ehd4	98	64.088	Oryzias_latipes_hsok
ENSCING00000023326	-	99	64.695	ENSOMEG00000019758	ehd4	98	64.641	Oryzias_melastigma
ENSCING00000023326	-	99	62.983	ENSOGAG00000016070	EHD4	99	62.983	Otolemur_garnettii
ENSCING00000023326	-	99	63.100	ENSOARG00000020458	EHD4	99	63.100	Ovis_aries
ENSCING00000023326	-	99	63.080	ENSPPAG00000042014	EHD4	98	63.080	Pan_paniscus
ENSCING00000023326	-	99	63.451	ENSPPRG00000013283	EHD4	98	63.451	Panthera_pardus
ENSCING00000023326	-	97	64.516	ENSPTIG00000021127	EHD4	99	64.516	Panthera_tigris_altaica
ENSCING00000023326	-	99	63.265	ENSPTRG00000006964	EHD4	98	63.265	Pan_troglodytes
ENSCING00000023326	-	99	63.265	ENSPANG00000018707	EHD4	98	63.265	Papio_anubis
ENSCING00000023326	-	78	66.667	ENSPMGG00000013623	ehd4	99	66.667	Periophthalmus_magnuspinnatus
ENSCING00000023326	-	99	63.822	ENSPEMG00000015332	Ehd4	98	63.822	Peromyscus_maniculatus_bairdii
ENSCING00000023326	-	99	64.007	ENSPCIG00000018367	EHD4	98	64.007	Phascolarctos_cinereus
ENSCING00000023326	-	99	64.510	ENSPFOG00000018511	ehd4	98	64.457	Poecilia_formosa
ENSCING00000023326	-	99	64.510	ENSPLAG00000003565	ehd4	98	64.457	Poecilia_latipinna
ENSCING00000023326	-	99	64.510	ENSPMEG00000017519	ehd4	98	64.457	Poecilia_mexicana
ENSCING00000023326	-	99	64.510	ENSPREG00000003513	ehd4	98	64.457	Poecilia_reticulata
ENSCING00000023326	-	99	63.080	ENSPPYG00000006387	EHD4	98	63.080	Pongo_abelii
ENSCING00000023326	-	99	63.265	ENSPCAG00000014068	EHD4	98	63.265	Procavia_capensis
ENSCING00000023326	-	99	62.799	ENSPCOG00000023830	EHD4	99	62.799	Propithecus_coquereli
ENSCING00000023326	-	78	64.103	ENSPVAG00000013749	EHD4	78	64.103	Pteropus_vampyrus
ENSCING00000023326	-	99	65.065	ENSPNYG00000013916	ehd4	98	65.009	Pundamilia_nyererei
ENSCING00000023326	-	99	65.562	ENSPNAG00000019307	ehd4	98	65.562	Pygocentrus_nattereri
ENSCING00000023326	-	99	63.636	ENSRNOG00000007584	Ehd4	98	63.636	Rattus_norvegicus
ENSCING00000023326	-	99	63.265	ENSRBIG00000040681	EHD4	98	63.265	Rhinopithecus_bieti
ENSCING00000023326	-	99	63.265	ENSRROG00000034638	EHD4	98	63.265	Rhinopithecus_roxellana
ENSCING00000023326	-	99	63.168	ENSSBOG00000035819	EHD4	99	63.168	Saimiri_boliviensis_boliviensis
ENSCING00000023326	-	94	62.549	ENSSHAG00000007926	-	99	62.305	Sarcophilus_harrisii
ENSCING00000023326	-	99	64.444	ENSSMAG00000002935	ehd4	98	64.207	Scophthalmus_maximus
ENSCING00000023326	-	99	64.510	ENSSDUG00000010947	ehd4	98	64.457	Seriola_dumerili
ENSCING00000023326	-	99	64.510	ENSSLDG00000020986	ehd4	98	64.457	Seriola_lalandi_dorsalis
ENSCING00000023326	-	100	61.749	ENSSPUG00000004459	EHD4	100	61.749	Sphenodon_punctatus
ENSCING00000023326	-	99	60.813	ENSSPAG00000005490	ehd4	98	60.773	Stegastes_partitus
ENSCING00000023326	-	99	63.636	ENSSSCG00000020666	EHD4	98	63.636	Sus_scrofa
ENSCING00000023326	-	97	64.190	ENSTGUG00000010994	EHD4	100	62.364	Taeniopygia_guttata
ENSCING00000023326	-	99	63.956	ENSTRUG00000022398	ehd4	98	63.904	Takifugu_rubripes
ENSCING00000023326	-	99	64.207	ENSTNIG00000004842	ehd4	98	64.207	Tetraodon_nigroviridis
ENSCING00000023326	-	99	63.168	ENSTTRG00000002551	EHD4	99	63.168	Tursiops_truncatus
ENSCING00000023326	-	99	62.894	ENSUMAG00000011183	EHD4	98	62.894	Ursus_maritimus
ENSCING00000023326	-	99	63.265	ENSVVUG00000026933	EHD4	99	62.915	Vulpes_vulpes
ENSCING00000023326	-	100	62.088	ENSXETG00000015794	ehd4	100	62.821	Xenopus_tropicalis
ENSCING00000023326	-	99	64.695	ENSXMAG00000021228	EHD4	98	64.641	Xiphophorus_maculatus