EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCING00000023345 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_intestinalis
Status: putative
Strand: Plus strand
Length: 3033 bases
Position: chr3:6455538-6458570
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCINP00000031444	Gar1	PF04410.14	2.9e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCINT00000031199	-	784	-	ENSCINP00000031444	236 (aa)	-	H2XP61

Gene Model

Click here to download ENSCING00000023345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCING00000023345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCING00000023345	-	54	40.000	ENSG00000145414	NAF1	95	52.500	Homo_sapiens
ENSCING00000023345	-	54	40.000	ENSANAG00000025253	NAF1	93	52.500	Aotus_nancymaae
ENSCING00000023345	-	58	37.324	ENSTSYG00000005946	NAF1	84	55.556	Carlito_syrichta
ENSCING00000023345	-	81	31.579	ENSCPBG00000003379	NAF1	58	30.315	Chrysemys_picta_bellii
ENSCING00000023345	-	71	63.889	ENSCSAVG00000002886	-	83	63.889	Ciona_savignyi
ENSCING00000023345	-	54	40.000	ENSCANG00000039151	NAF1	95	52.500	Colobus_angolensis_palliatus
ENSCING00000023345	-	53	43.846	ENSFHEG00000015835	-	51	30.120	Fundulus_heteroclitus
ENSCING00000023345	-	54	40.000	ENSGGOG00000000894	NAF1	95	52.500	Gorilla_gorilla
ENSCING00000023345	-	54	40.000	ENSMLEG00000035330	NAF1	95	52.500	Mandrillus_leucophaeus
ENSCING00000023345	-	54	40.000	ENSNLEG00000006459	-	95	52.500	Nomascus_leucogenys
ENSCING00000023345	-	54	40.000	ENSPTRG00000016560	NAF1	95	52.500	Pan_troglodytes
ENSCING00000023345	-	54	40.000	ENSPANG00000015574	NAF1	95	52.500	Papio_anubis
ENSCING00000023345	-	54	40.000	ENSRROG00000040912	NAF1	95	52.500	Rhinopithecus_roxellana